RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 PLEKHG3A1L390 1219 aa37.19■■■■□ 3.54
LAPTM4B-203ENST00000521545 NBPF8Q3BBV2 869 aa37.18■■■■□ 3.54
LAPTM4B-203ENST00000521545 NWD2Q9ULI1 1742 aa37.18■■■■□ 3.54
LAPTM4B-203ENST00000521545 PLCH1Q4KWH8 1693 aa37.18■■■■□ 3.54
LAPTM4B-203ENST00000521545 POLR3AO14802 1390 aaPredicted RBP37.17■■■■□ 3.54
LAPTM4B-203ENST00000521545 GLI3P10071 1580 aa37.16■■■■□ 3.54
LAPTM4B-203ENST00000521545 TOPAZ1Q8N9V7 1692 aa37.13■■■■□ 3.53
LAPTM4B-203ENST00000521545 CABP2Q9NPB3 220 aa37.13■■■■□ 3.53
LAPTM4B-203ENST00000521545 BTG4Q9NY30 223 aa37.13■■■■□ 3.53
LAPTM4B-203ENST00000521545 ROCK2O75116 1388 aaKnown RBP37.12■■■■□ 3.53
LAPTM4B-203ENST00000521545 TRPM1Q7Z4N2 1603 aa37.1■■■■□ 3.53
LAPTM4B-203ENST00000521545 QRICH2Q9H0J4 1663 aa37.1■■■■□ 3.53
LAPTM4B-203ENST00000521545 PRDM11Q9NQV5 511 aa37.09■■■■□ 3.53
LAPTM4B-203ENST00000521545 NUTM2GQ5VZR2 741 aa37.08■■■■□ 3.53
LAPTM4B-203ENST00000521545 SEPT12Q8IYM1 358 aa37.08■■■■□ 3.53
LAPTM4B-203ENST00000521545 COL14A1Q05707 1796 aaKnown RBP37.08■■■■□ 3.53
LAPTM4B-203ENST00000521545 PPIP5K1Q6PFW1 1433 aa37.08■■■■□ 3.53
LAPTM4B-203ENST00000521545 CCDC125Q86Z20 511 aa37.06■■■■□ 3.52
LAPTM4B-203ENST00000521545 ABTB2Q8N961 1025 aa37.05■■■■□ 3.52
LAPTM4B-203ENST00000521545 EVC2Q86UK5 1308 aa37.05■■■■□ 3.52
LAPTM4B-203ENST00000521545 ONECUT3O60422 494 aaPredicted RBP37.04■■■■□ 3.52
LAPTM4B-203ENST00000521545 TRIM26Q12899 539 aaPredicted RBP37.04■■■■□ 3.52
LAPTM4B-203ENST00000521545 CRYBG1Q9Y4K1 1723 aa37.03■■■■□ 3.52
LAPTM4B-203ENST00000521545 CABP1Q9NZU7 370 aa37.01■■■■□ 3.52
LAPTM4B-203ENST00000521545 A0A0G2JS52 829 aa37■■■■□ 3.51
LAPTM4B-203ENST00000521545 ZC3H6P61129 1189 aaKnown RBP37■■■■□ 3.51
LAPTM4B-203ENST00000521545 MYT1Q01538 1121 aa37■■■■□ 3.51
LAPTM4B-203ENST00000521545 KIAA0232Q92628 1395 aa37■■■■□ 3.51
LAPTM4B-203ENST00000521545 NRAPQ86VF7 1730 aa36.99■■■■□ 3.51
LAPTM4B-203ENST00000521545 BRD4O60885 1362 aaPredicted RBP36.97■■■■□ 3.51
LAPTM4B-203ENST00000521545 FAM98CQ17RN3 349 aaKnown RBP36.97■■■■□ 3.51
LAPTM4B-203ENST00000521545 TONSLQ96HA7 1378 aa36.96■■■■□ 3.51
LAPTM4B-203ENST00000521545 CHRNA2Q15822 529 aa36.96■■■■□ 3.51
LAPTM4B-203ENST00000521545 NLRP13Q86W25 1043 aa36.96■■■■□ 3.51
LAPTM4B-203ENST00000521545 BRWD3Q6RI45 1802 aa36.95■■■■□ 3.51
LAPTM4B-203ENST00000521545 KRT27Q7Z3Y8 459 aa36.95■■■■□ 3.51
LAPTM4B-203ENST00000521545 PHRF1Q9P1Y6 1649 aaKnown RBP36.95■■■■□ 3.51
LAPTM4B-203ENST00000521545 EP400Q96L91 3159 aa36.94■■■■□ 3.5
LAPTM4B-203ENST00000521545 SPATA31A5Q5VU36 1347 aa36.93■■■■□ 3.5
LAPTM4B-203ENST00000521545 SPATA31A7Q8IWB4 1347 aa36.93■■■■□ 3.5
LAPTM4B-203ENST00000521545 CARD11Q9BXL7 1154 aa36.91■■■■□ 3.5
LAPTM4B-203ENST00000521545 STRN4Q9NRL3 753 aa36.89■■■■□ 3.5
LAPTM4B-203ENST00000521545 USP19O94966 1318 aa36.88■■■■□ 3.49
LAPTM4B-203ENST00000521545 BLMP54132 1417 aaPredicted RBP36.88■■■■□ 3.49
LAPTM4B-203ENST00000521545 SF3B2Q13435 895 aaKnown RBP36.88■■■■□ 3.49
LAPTM4B-203ENST00000521545 USP6P35125 1406 aa36.87■■■■□ 3.49
LAPTM4B-203ENST00000521545 EVA1CP58658 441 aa36.87■■■■□ 3.49
LAPTM4B-203ENST00000521545 GCP02774 474 aa36.86■■■■□ 3.49
LAPTM4B-203ENST00000521545 ZNF692Q9BU19 519 aaPredicted RBP36.85■■■■□ 3.49
LAPTM4B-203ENST00000521545 NLRP6P59044 892 aa36.84■■■■□ 3.49
LAPTM4B-203ENST00000521545 CPDO75976 1380 aa36.83■■■■□ 3.49
LAPTM4B-203ENST00000521545 NRKQ7Z2Y5 1582 aa36.83■■■■□ 3.49
LAPTM4B-203ENST00000521545 SPATA31A1Q5TZJ5 1347 aa36.82■■■■□ 3.48
LAPTM4B-203ENST00000521545 ZRANB1Q9UGI0 708 aa36.8■■■■□ 3.48
LAPTM4B-203ENST00000521545 SBNO2Q9Y2G9 1366 aa36.78■■■■□ 3.48
LAPTM4B-203ENST00000521545 USP35Q9P2H5 1018 aa36.76■■■■□ 3.48
LAPTM4B-203ENST00000521545 SSH2Q76I76 1423 aa36.76■■■■□ 3.47
LAPTM4B-203ENST00000521545 ZBTB7CA1YPR0 619 aa36.74■■■■□ 3.47
LAPTM4B-203ENST00000521545 TTC21BQ7Z4L5 1316 aa36.74■■■■□ 3.47
LAPTM4B-203ENST00000521545 CAMTA1Q9Y6Y1 1673 aa36.74■■■■□ 3.47
LAPTM4B-203ENST00000521545 LARP1Q6PKG0 1096 aaKnown RBP36.72■■■■□ 3.47
LAPTM4B-203ENST00000521545 DEFB132Q7Z7B7 95 aa36.72■■■■□ 3.47
LAPTM4B-203ENST00000521545 THSD7AQ9UPZ6 1657 aa36.7■■■■□ 3.47
LAPTM4B-203ENST00000521545 TTC21AQ8NDW8 1320 aa36.7■■■■□ 3.47
LAPTM4B-203ENST00000521545 KTN1Q86UP2 1357 aaKnown RBP36.69■■■■□ 3.46
LAPTM4B-203ENST00000521545 LMO7Q8WWI1 1683 aa36.68■■■■□ 3.46
LAPTM4B-203ENST00000521545 FAM182BQ5T319 152 aa36.68■■■■□ 3.46
LAPTM4B-203ENST00000521545 BARGINQ6ZT62 677 aa36.68■■■■□ 3.46
LAPTM4B-203ENST00000521545 CPSF1Q10570 1443 aaKnown RBP36.68■■■■□ 3.46
LAPTM4B-203ENST00000521545 TCP11L2Q8N4U5 519 aa36.67■■■■□ 3.46
LAPTM4B-203ENST00000521545 SLIT3O75094 1523 aa36.67■■■■□ 3.46
LAPTM4B-203ENST00000521545 AKAP12Q02952 1782 aa36.67■■■■□ 3.46
LAPTM4B-203ENST00000521545 PIK3C2AO00443 1686 aa36.67■■■■□ 3.46
LAPTM4B-203ENST00000521545 BAG6P46379 1132 aa36.66■■■■□ 3.46
LAPTM4B-203ENST00000521545 KCNH5Q8NCM2 988 aa36.65■■■■□ 3.46
LAPTM4B-203ENST00000521545 TMC1Q8TDI8 760 aa36.65■■■■□ 3.46
LAPTM4B-203ENST00000521545 AATKQ6ZMQ8 1374 aa36.65■■■■□ 3.46
LAPTM4B-203ENST00000521545 THRAP3Q9Y2W1 955 aaKnown RBP36.63■■■■□ 3.45
LAPTM4B-203ENST00000521545 PDE3BQ13370 1112 aa36.62■■■■□ 3.45
LAPTM4B-203ENST00000521545 COL5A2P05997 1499 aaPredicted RBP36.62■■■■□ 3.45
LAPTM4B-203ENST00000521545 FAM196AQ6ZSG2 479 aa36.6■■■■□ 3.45
LAPTM4B-203ENST00000521545 HDGFL2Q7Z4V5 671 aaPredicted RBP36.6■■■■□ 3.45
LAPTM4B-203ENST00000521545 SOX12O15370 315 aa36.58■■■■□ 3.45
LAPTM4B-203ENST00000521545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.58■■■■□ 3.45
LAPTM4B-203ENST00000521545 PUS7Q96PZ0 661 aaKnown RBP36.58■■■■□ 3.45
LAPTM4B-203ENST00000521545 SLC24A1O60721 1099 aa36.57■■■■□ 3.44
LAPTM4B-203ENST00000521545 CRB1P82279 1406 aa36.57■■■■□ 3.44
LAPTM4B-203ENST00000521545 ARHGEF25Q86VW2 580 aa36.56■■■■□ 3.44
LAPTM4B-203ENST00000521545 SLC12A5Q9H2X9 1139 aa36.56■■■■□ 3.44
LAPTM4B-203ENST00000521545 ST20-MTHFSA0A0A6YYL1 179 aa36.55■■■■□ 3.44
LAPTM4B-203ENST00000521545 TERF2IPQ9NYB0 399 aa36.55■■■■□ 3.44
LAPTM4B-203ENST00000521545 TOM1L2Q6ZVM7 507 aa36.54■■■■□ 3.44
LAPTM4B-203ENST00000521545 RGPD1P0DJD0 1748 aa36.54■■■■□ 3.44
LAPTM4B-203ENST00000521545 MON2Q7Z3U7 1717 aa36.53■■■■□ 3.44
LAPTM4B-203ENST00000521545 AXIN2Q9Y2T1 843 aa36.52■■■■□ 3.44
LAPTM4B-203ENST00000521545 TRIM37O94972 964 aa36.5■■■■□ 3.43
LAPTM4B-203ENST00000521545 EN1Q05925 392 aaPredicted RBP36.5■■■■□ 3.43
LAPTM4B-203ENST00000521545 TESK2Q96S53 571 aa36.5■■■■□ 3.43
LAPTM4B-203ENST00000521545 CD163L1Q9NR16 1453 aa36.5■■■■□ 3.43
LAPTM4B-203ENST00000521545 COL18A1P39060 1754 aa36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms