RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 TMC1Q8TDI8 760 aa19.22■□□□□ 0.67
CTNNA1-226ENST00000521368 LRP6O75581 1613 aa19.22■□□□□ 0.67
CTNNA1-226ENST00000521368 SLC12A5Q9H2X9 1139 aa19.21■□□□□ 0.67
CTNNA1-226ENST00000521368 TERF2IPQ9NYB0 399 aa19.21■□□□□ 0.67
CTNNA1-226ENST00000521368 KTN1Q86UP2 1357 aaKnown RBP19.2■□□□□ 0.66
CTNNA1-226ENST00000521368 ABCA3Q99758 1704 aa19.2■□□□□ 0.66
CTNNA1-226ENST00000521368 HDGFL2Q7Z4V5 671 aaPredicted RBP19.2■□□□□ 0.66
CTNNA1-226ENST00000521368 PAK3O75914 559 aaPredicted RBP19.19■□□□□ 0.66
CTNNA1-226ENST00000521368 CRYBG1Q9Y4K1 1723 aa19.19■□□□□ 0.66
CTNNA1-226ENST00000521368 A0A1W2PP64 1363 aa19.19■□□□□ 0.66
CTNNA1-226ENST00000521368 ANKRD36BQ8N2N9 1353 aa19.19■□□□□ 0.66
CTNNA1-226ENST00000521368 EDC4Q6P2E9 1401 aaKnown RBP19.17■□□□□ 0.66
CTNNA1-226ENST00000521368 LMOD2Q6P5Q4 547 aa19.17■□□□□ 0.66
CTNNA1-226ENST00000521368 TTC21AQ8NDW8 1320 aa19.17■□□□□ 0.66
CTNNA1-226ENST00000521368 MARF1Q9Y4F3 1742 aaKnown RBP19.17■□□□□ 0.66
CTNNA1-226ENST00000521368 PIK3C2AO00443 1686 aa19.16■□□□□ 0.66
CTNNA1-226ENST00000521368 TTC21BQ7Z4L5 1316 aa19.16■□□□□ 0.66
CTNNA1-226ENST00000521368 NUTM2BA6NNL0 878 aaPredicted RBP19.15■□□□□ 0.66
CTNNA1-226ENST00000521368 NUTM2EB1AL46 878 aaPredicted RBP19.15■□□□□ 0.66
CTNNA1-226ENST00000521368 NUTM2AQ8IVF1 878 aaPredicted RBP19.15■□□□□ 0.66
CTNNA1-226ENST00000521368 PHRF1Q9P1Y6 1649 aaKnown RBP19.14■□□□□ 0.66
CTNNA1-226ENST00000521368 ABTB2Q8N961 1025 aa19.14■□□□□ 0.65
CTNNA1-226ENST00000521368 USP54Q70EL1 1684 aa19.14■□□□□ 0.65
CTNNA1-226ENST00000521368 C11orf95C9JLR9 678 aaPredicted RBP19.13■□□□□ 0.65
CTNNA1-226ENST00000521368 USP19O94966 1318 aa19.12■□□□□ 0.65
CTNNA1-226ENST00000521368 NLRP13Q86W25 1043 aa19.12■□□□□ 0.65
CTNNA1-226ENST00000521368 KIF7Q2M1P5 1343 aa19.11■□□□□ 0.65
CTNNA1-226ENST00000521368 MEX3CQ5U5Q3 659 aaKnown RBP19.11■□□□□ 0.65
CTNNA1-226ENST00000521368 CABLES1Q8TDN4 633 aa19.1■□□□□ 0.65
CTNNA1-226ENST00000521368 SLIT3O75094 1523 aa19.1■□□□□ 0.65
CTNNA1-226ENST00000521368 USP31Q70CQ4 1352 aa19.09■□□□□ 0.65
CTNNA1-226ENST00000521368 HAP1P54257 671 aaPredicted RBP19.09■□□□□ 0.65
CTNNA1-226ENST00000521368 POLR3GLQ9BT43 218 aa19.09■□□□□ 0.65
CTNNA1-226ENST00000521368 ADAMTS2O95450 1211 aa19.08■□□□□ 0.64
CTNNA1-226ENST00000521368 NLRP6P59044 892 aa19.08■□□□□ 0.64
CTNNA1-226ENST00000521368 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.64
CTNNA1-226ENST00000521368 CCDC7Q96M83 1385 aa19.07■□□□□ 0.64
CTNNA1-226ENST00000521368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.07■□□□□ 0.642e-7■■■■□ 19.7
CTNNA1-226ENST00000521368 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
CTNNA1-226ENST00000521368 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
CTNNA1-226ENST00000521368 OVOS2A0A0J9YW53 1432 aa19.05■□□□□ 0.64
CTNNA1-226ENST00000521368 OVOS2Q6IE36 1432 aa19.05■□□□□ 0.64
CTNNA1-226ENST00000521368 KIF20BQ96Q89 1820 aa19.04■□□□□ 0.64
CTNNA1-226ENST00000521368 WASHC2AQ641Q2 1341 aa19.04■□□□□ 0.64
CTNNA1-226ENST00000521368 COL14A1Q05707 1796 aaKnown RBP19.04■□□□□ 0.64
CTNNA1-226ENST00000521368 GCP02774 474 aa19.04■□□□□ 0.64
CTNNA1-226ENST00000521368 NME9Q86XW9 330 aa19.04■□□□□ 0.64
CTNNA1-226ENST00000521368 CARD14Q9BXL6 1004 aa19.04■□□□□ 0.64
CTNNA1-226ENST00000521368 NSD3Q9BZ95 1437 aa19.04■□□□□ 0.64
CTNNA1-226ENST00000521368 NWD2Q9ULI1 1742 aa19.04■□□□□ 0.64
CTNNA1-226ENST00000521368 SLIT2O94813 1529 aa19.04■□□□□ 0.64
CTNNA1-226ENST00000521368 CPDO75976 1380 aa19.04■□□□□ 0.64
CTNNA1-226ENST00000521368 PLEKHG5O94827 1062 aa19.03■□□□□ 0.64
CTNNA1-226ENST00000521368 FNBP4Q8N3X1 1017 aaPredicted RBP19.03■□□□□ 0.64
CTNNA1-226ENST00000521368 KCNH5Q8NCM2 988 aa19.03■□□□□ 0.64
CTNNA1-226ENST00000521368 NGLY1Q96IV0 654 aa19.03■□□□□ 0.64
CTNNA1-226ENST00000521368 PLCH1Q4KWH8 1693 aa19.03■□□□□ 0.64
CTNNA1-226ENST00000521368 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.03■□□□□ 0.64
CTNNA1-226ENST00000521368 AFF2P51816 1311 aa19.02■□□□□ 0.64
CTNNA1-226ENST00000521368 NFAT5O94916 1531 aa19.02■□□□□ 0.64
CTNNA1-226ENST00000521368 ZNF772Q68DY9 489 aaPredicted RBP19.02■□□□□ 0.64
CTNNA1-226ENST00000521368 RGS17Q9UGC6 210 aaPredicted RBP19.02■□□□□ 0.64
CTNNA1-226ENST00000521368 PANK3Q9H999 370 aa19.01■□□□□ 0.63
CTNNA1-226ENST00000521368 FYB1O15117 783 aa19■□□□□ 0.63
CTNNA1-226ENST00000521368 KIAA0232Q92628 1395 aa19■□□□□ 0.63
CTNNA1-226ENST00000521368 CGNL1Q0VF96 1302 aa19■□□□□ 0.63
CTNNA1-226ENST00000521368 BCL9LQ86UU0 1499 aa18.99■□□□□ 0.63
CTNNA1-226ENST00000521368 FAM83GA6ND36 823 aa18.99■□□□□ 0.63
CTNNA1-226ENST00000521368 ZRANB1Q9UGI0 708 aa18.99■□□□□ 0.63
CTNNA1-226ENST00000521368 LMO7Q8WWI1 1683 aa18.98■□□□□ 0.63
CTNNA1-226ENST00000521368 NRAPQ86VF7 1730 aa18.98■□□□□ 0.63
CTNNA1-226ENST00000521368 ZC3H6P61129 1189 aaKnown RBP18.98■□□□□ 0.63
CTNNA1-226ENST00000521368 COG3Q96JB2 828 aa18.98■□□□□ 0.63
CTNNA1-226ENST00000521368 PRDM11Q9NQV5 511 aa18.98■□□□□ 0.63
CTNNA1-226ENST00000521368 ABCC6O95255 1503 aa18.98■□□□□ 0.63
CTNNA1-226ENST00000521368 ANKRD26Q9UPS8 1709 aa18.97■□□□□ 0.63
CTNNA1-226ENST00000521368 USP21Q9UK80 565 aa18.97■□□□□ 0.63
CTNNA1-226ENST00000521368 NSD2O96028 1365 aa18.95■□□□□ 0.62
CTNNA1-226ENST00000521368 AATKQ6ZMQ8 1374 aa18.95■□□□□ 0.62
CTNNA1-226ENST00000521368 ARHGEF25Q86VW2 580 aa18.95■□□□□ 0.62
CTNNA1-226ENST00000521368 UNC5CLQ8IV45 518 aa18.95■□□□□ 0.62
CTNNA1-226ENST00000521368 GGNBP2Q9H3C7 697 aa18.95■□□□□ 0.62
CTNNA1-226ENST00000521368 LTN1O94822 1766 aa18.94■□□□□ 0.62
CTNNA1-226ENST00000521368 COL18A1P39060 1754 aa18.94■□□□□ 0.62
CTNNA1-226ENST00000521368 ATRNO75882 1429 aa18.94■□□□□ 0.62
CTNNA1-226ENST00000521368 POTEAQ6S8J7 498 aa18.93■□□□□ 0.62
CTNNA1-226ENST00000521368 BTG4Q9NY30 223 aa18.93■□□□□ 0.62
CTNNA1-226ENST00000521368 TRPC5Q9UL62 973 aaPredicted RBP18.93■□□□□ 0.62
CTNNA1-226ENST00000521368 KNSTRNQ9Y448 316 aa18.93■□□□□ 0.62
CTNNA1-226ENST00000521368 CAMTA1Q9Y6Y1 1673 aa18.92■□□□□ 0.62
CTNNA1-226ENST00000521368 CHRNA2Q15822 529 aa18.92■□□□□ 0.62
CTNNA1-226ENST00000521368 SOX12O15370 315 aa18.91■□□□□ 0.62
CTNNA1-226ENST00000521368 PER1O15534 1290 aaPredicted RBP18.91■□□□□ 0.62
CTNNA1-226ENST00000521368 QTRT2Q9H974 415 aaKnown RBP18.91■□□□□ 0.62
CTNNA1-226ENST00000521368 VPS72Q15906 364 aa18.89■□□□□ 0.61
CTNNA1-226ENST00000521368 NPC1L1Q9UHC9 1359 aa18.89■□□□□ 0.61
CTNNA1-226ENST00000521368 COL5A2P05997 1499 aaPredicted RBP18.89■□□□□ 0.61
CTNNA1-226ENST00000521368 AMER1Q5JTC6 1135 aaPredicted RBP18.88■□□□□ 0.61
CTNNA1-226ENST00000521368 CDK12Q9NYV4 1490 aaPredicted RBP18.88■□□□□ 0.61
CTNNA1-226ENST00000521368 RTL1A6NKG5 1358 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms