RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 PRPF40AO75400 957 aaKnown RBP15.85■□□□□ 0.13
TRAPPC9-208ENST00000520857 RBM25P49756 843 aaKnown RBP15.85■□□□□ 0.13
TRAPPC9-208ENST00000520857 DIAPH1O60610 1272 aaKnown RBP15.85■□□□□ 0.13
TRAPPC9-208ENST00000520857 HMOX1P09601 288 aa15.85■□□□□ 0.13
TRAPPC9-208ENST00000520857 BAG4O95429 457 aaKnown RBP15.84■□□□□ 0.13
TRAPPC9-208ENST00000520857 ERVK-7P63135 1459 aa15.84■□□□□ 0.13
TRAPPC9-208ENST00000520857 CDC45O75419 566 aa15.84■□□□□ 0.13
TRAPPC9-208ENST00000520857 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.84■□□□□ 0.13
TRAPPC9-208ENST00000520857 BMP2KLQ5H9B9 411 aa15.84■□□□□ 0.13
TRAPPC9-208ENST00000520857 CASC1Q6TDU7 716 aa15.84■□□□□ 0.13
TRAPPC9-208ENST00000520857 MAST1Q9Y2H9 1570 aa15.83■□□□□ 0.13
TRAPPC9-208ENST00000520857 XPCQ01831 940 aaPredicted RBP15.83■□□□□ 0.13
TRAPPC9-208ENST00000520857 MINK1Q8N4C8 1332 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC9-208ENST00000520857 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC9-208ENST00000520857 MPNDQ8N594 471 aa15.82■□□□□ 0.12
TRAPPC9-208ENST00000520857 MYO5CQ9NQX4 1742 aa15.82■□□□□ 0.12
TRAPPC9-208ENST00000520857 LAMC1P11047 1609 aa15.82■□□□□ 0.12
TRAPPC9-208ENST00000520857 NUCB2P80303 420 aa15.82■□□□□ 0.12
TRAPPC9-208ENST00000520857 PLCB2Q00722 1185 aa15.82■□□□□ 0.12
TRAPPC9-208ENST00000520857 PRKAR2BP31323 418 aa15.81■□□□□ 0.12
TRAPPC9-208ENST00000520857 GCC1Q96CN9 775 aa15.81■□□□□ 0.12
TRAPPC9-208ENST00000520857 PDCL3Q9H2J4 239 aa15.81■□□□□ 0.12
TRAPPC9-208ENST00000520857 ZMYM3Q14202 1370 aa15.81■□□□□ 0.12
TRAPPC9-208ENST00000520857 KLHL40Q2TBA0 621 aa15.81■□□□□ 0.12
TRAPPC9-208ENST00000520857 NOS1P29475 1434 aa15.8■□□□□ 0.12
TRAPPC9-208ENST00000520857 ST18O60284 1047 aa15.8■□□□□ 0.12
TRAPPC9-208ENST00000520857 RBM27Q9P2N5 1060 aaKnown RBP15.8■□□□□ 0.12
TRAPPC9-208ENST00000520857 KDM5AP29375 1690 aaKnown RBP15.8■□□□□ 0.12
TRAPPC9-208ENST00000520857 TERF2IPQ9NYB0 399 aa15.8■□□□□ 0.12
TRAPPC9-208ENST00000520857 TRIM35Q9UPQ4 493 aa15.8■□□□□ 0.12
TRAPPC9-208ENST00000520857 ATP10AO60312 1499 aa15.8■□□□□ 0.12
TRAPPC9-208ENST00000520857 PTPRTO14522 1441 aa15.79■□□□□ 0.12
TRAPPC9-208ENST00000520857 FBLN1P23142 703 aa15.79■□□□□ 0.12
TRAPPC9-208ENST00000520857 PHF23Q9BUL5 403 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC9-208ENST00000520857 RABEP1Q15276 862 aa15.78■□□□□ 0.12
TRAPPC9-208ENST00000520857 UNC13BO14795 1591 aa15.78■□□□□ 0.12
TRAPPC9-208ENST00000520857 UQCRHLA0A096LP55 91 aa15.78■□□□□ 0.12
TRAPPC9-208ENST00000520857 UQCRHP07919 91 aa15.78■□□□□ 0.12
TRAPPC9-208ENST00000520857 HDGFL2Q7Z4V5 671 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC9-208ENST00000520857 IQGAP3Q86VI3 1631 aa15.77■□□□□ 0.12
TRAPPC9-208ENST00000520857 ZSCAN23Q3MJ62 389 aa15.77■□□□□ 0.11
TRAPPC9-208ENST00000520857 MADDQ8WXG6 1647 aa15.77■□□□□ 0.11
TRAPPC9-208ENST00000520857 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.11
TRAPPC9-208ENST00000520857 SYCE3A1L190 88 aa15.76■□□□□ 0.11
TRAPPC9-208ENST00000520857 PREX2Q70Z35 1606 aa15.76■□□□□ 0.11
TRAPPC9-208ENST00000520857 TTC37Q6PGP7 1564 aa15.76■□□□□ 0.11
TRAPPC9-208ENST00000520857 STAG3Q9UJ98 1225 aa15.76■□□□□ 0.11
TRAPPC9-208ENST00000520857 OFD1O75665 1012 aa15.75■□□□□ 0.11
TRAPPC9-208ENST00000520857 PRIM1P49642 420 aaKnown RBP15.75■□□□□ 0.11
TRAPPC9-208ENST00000520857 CHAMP1Q96JM3 812 aa15.75■□□□□ 0.11
TRAPPC9-208ENST00000520857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.75■□□□□ 0.11
TRAPPC9-208ENST00000520857 PKP1Q13835 747 aa15.75■□□□□ 0.11
TRAPPC9-208ENST00000520857 INTS3Q68E01 1043 aaKnown RBP15.75■□□□□ 0.11
TRAPPC9-208ENST00000520857 UGGT1Q9NYU2 1555 aa15.74■□□□□ 0.11
TRAPPC9-208ENST00000520857 C16orf71Q8IYS4 520 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC9-208ENST00000520857 TSPYL6Q8N831 410 aa15.74■□□□□ 0.11
TRAPPC9-208ENST00000520857 RBSNQ9H1K0 784 aa15.74■□□□□ 0.11
TRAPPC9-208ENST00000520857 PLCH2O75038 1416 aa15.74■□□□□ 0.11
TRAPPC9-208ENST00000520857 ABCC11Q96J66 1382 aa15.74■□□□□ 0.11
TRAPPC9-208ENST00000520857 TWISTNBQ3B726 338 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC9-208ENST00000520857 ZGPATQ8N5A5 531 aaKnown RBP15.73■□□□□ 0.11
TRAPPC9-208ENST00000520857 C14orf93Q9H972 538 aaKnown RBP15.73■□□□□ 0.11
TRAPPC9-208ENST00000520857 ALDH1L2Q3SY69 923 aa15.73■□□□□ 0.11
TRAPPC9-208ENST00000520857 SMARCA5O60264 1052 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC9-208ENST00000520857 RTEL1-TNFRSF6BF6WH68 1400 aa15.73■□□□□ 0.11
TRAPPC9-208ENST00000520857 VGFO15240 615 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC9-208ENST00000520857 KIF2CQ99661 725 aa15.72■□□□□ 0.11
TRAPPC9-208ENST00000520857 ZBTB7BO15156 539 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC9-208ENST00000520857 SLC4A10Q6U841 1118 aa15.72■□□□□ 0.11
TRAPPC9-208ENST00000520857 NEK4P51957 841 aa15.72■□□□□ 0.11
TRAPPC9-208ENST00000520857 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
TRAPPC9-208ENST00000520857 PPP1R9BQ96SB3 815 aa15.72■□□□□ 0.11
TRAPPC9-208ENST00000520857 API5Q9BZZ5 524 aaKnown RBP15.72■□□□□ 0.11
TRAPPC9-208ENST00000520857 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.11
TRAPPC9-208ENST00000520857 GNAI1P63096 354 aa15.71■□□□□ 0.11
TRAPPC9-208ENST00000520857 DDIT3P35638 169 aa15.71■□□□□ 0.1
TRAPPC9-208ENST00000520857 ATAD2Q6PL18 1390 aa15.71■□□□□ 0.1
TRAPPC9-208ENST00000520857 RNF17Q9BXT8 1623 aaKnown RBP15.7■□□□□ 0.1
TRAPPC9-208ENST00000520857 REC8O95072 547 aa15.7■□□□□ 0.1
TRAPPC9-208ENST00000520857 VIRMAQ69YN4 1812 aaKnown RBP15.7■□□□□ 0.1
TRAPPC9-208ENST00000520857 IQGAP1P46940 1657 aa15.7■□□□□ 0.1
TRAPPC9-208ENST00000520857 PLXNC1O60486 1568 aa15.7■□□□□ 0.1
TRAPPC9-208ENST00000520857 PRDM10Q9NQV6 1147 aa15.7■□□□□ 0.1
TRAPPC9-208ENST00000520857 CSPP1Q1MSJ5 1256 aa15.7■□□□□ 0.1
TRAPPC9-208ENST00000520857 FYB1O15117 783 aa15.69■□□□□ 0.1
TRAPPC9-208ENST00000520857 TRPM2O94759 1503 aa15.69■□□□□ 0.1
TRAPPC9-208ENST00000520857 KIAA2012Q0VF49 1180 aa15.69■□□□□ 0.1
TRAPPC9-208ENST00000520857 DCTN1Q14203 1278 aa15.69■□□□□ 0.1
TRAPPC9-208ENST00000520857 CCDC39Q9UFE4 941 aa15.69■□□□□ 0.1
TRAPPC9-208ENST00000520857 IL16Q14005 1332 aa15.69■□□□□ 0.1
TRAPPC9-208ENST00000520857 ANKRD36BQ8N2N9 1353 aa15.69■□□□□ 0.1
TRAPPC9-208ENST00000520857 TRIM6-TRIM34B2RNG4 842 aa15.69■□□□□ 0.1
TRAPPC9-208ENST00000520857 OTUD7AQ8TE49 926 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC9-208ENST00000520857 PLEKHF1Q96S99 279 aa15.69■□□□□ 0.1
TRAPPC9-208ENST00000520857 PRAM1Q96QH2 718 aa15.68■□□□□ 0.1
TRAPPC9-208ENST00000520857 LMBRD1Q9NUN5 540 aa15.68■□□□□ 0.1
TRAPPC9-208ENST00000520857 CLTCL1P53675 1640 aa15.68■□□□□ 0.1
TRAPPC9-208ENST00000520857 SOX12O15370 315 aa15.68■□□□□ 0.1
TRAPPC9-208ENST00000520857 CABP1Q9NZU7 370 aa15.68■□□□□ 0.1
TRAPPC9-208ENST00000520857 FCHSD2O94868 740 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms