RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 EDC4Q6P2E9 1401 aaKnown RBP23.17■■□□□ 1.3
TSNARE1-205ENST00000520166 SSH2Q76I76 1423 aa23.17■■□□□ 1.3
TSNARE1-205ENST00000520166 NPC1L1Q9UHC9 1359 aa23.15■■□□□ 1.3
TSNARE1-205ENST00000520166 BRINP3Q76B58 766 aa23.15■■□□□ 1.3
TSNARE1-205ENST00000520166 PSME1Q06323 249 aa23.14■■□□□ 1.3
TSNARE1-205ENST00000520166 RALBP1Q15311 655 aa23.14■■□□□ 1.3
TSNARE1-205ENST00000520166 NUTM2GQ5VZR2 741 aa23.13■■□□□ 1.29
TSNARE1-205ENST00000520166 MORC1Q86VD1 984 aa23.13■■□□□ 1.29
TSNARE1-205ENST00000520166 PAK3O75914 559 aaPredicted RBP23.13■■□□□ 1.29
TSNARE1-205ENST00000520166 NRKQ7Z2Y5 1582 aa23.13■■□□□ 1.29
TSNARE1-205ENST00000520166 PPP2R1AP30153 589 aa23.11■■□□□ 1.29
TSNARE1-205ENST00000520166 KRT28Q7Z3Y7 464 aa23.1■■□□□ 1.29
TSNARE1-205ENST00000520166 MYBBP1AQ9BQG0 1328 aaKnown RBP23.09■■□□□ 1.29
TSNARE1-205ENST00000520166 KIF20BQ96Q89 1820 aa23.08■■□□□ 1.28
TSNARE1-205ENST00000520166 CCER2I3L3R5 266 aa23.08■■□□□ 1.28
TSNARE1-205ENST00000520166 PLEKHG5O94827 1062 aa23.07■■□□□ 1.28
TSNARE1-205ENST00000520166 NSD2O96028 1365 aa23.05■■□□□ 1.28
TSNARE1-205ENST00000520166 ABTB2Q8N961 1025 aa23.05■■□□□ 1.28
TSNARE1-205ENST00000520166 MRS2Q9HD23 443 aa23.05■■□□□ 1.28
TSNARE1-205ENST00000520166 PIK3C2AO00443 1686 aa23.04■■□□□ 1.28
TSNARE1-205ENST00000520166 KIF1AQ12756 1690 aa23.04■■□□□ 1.28
TSNARE1-205ENST00000520166 SOX12O15370 315 aa23.04■■□□□ 1.28
TSNARE1-205ENST00000520166 COG3Q96JB2 828 aa23.03■■□□□ 1.28
TSNARE1-205ENST00000520166 TTC21AQ8NDW8 1320 aa23.03■■□□□ 1.28
TSNARE1-205ENST00000520166 NLRP6P59044 892 aa23.02■■□□□ 1.28
TSNARE1-205ENST00000520166 LMOD2Q6P5Q4 547 aa23.02■■□□□ 1.28
TSNARE1-205ENST00000520166 NLRP13Q86W25 1043 aa23.02■■□□□ 1.28
TSNARE1-205ENST00000520166 PIP4K2BP78356 416 aa23.01■■□□□ 1.27
TSNARE1-205ENST00000520166 TRPM3Q9HCF6 1732 aaPredicted RBP23.01■■□□□ 1.27
TSNARE1-205ENST00000520166 ANKRD26Q9UPS8 1709 aa23.01■■□□□ 1.27
TSNARE1-205ENST00000520166 CERKQ8TCT0 537 aa23■■□□□ 1.27
TSNARE1-205ENST00000520166 OVOS2A0A0J9YW53 1432 aa23■■□□□ 1.27
TSNARE1-205ENST00000520166 OVOS2Q6IE36 1432 aa23■■□□□ 1.27
TSNARE1-205ENST00000520166 PXDNQ92626 1479 aa23■■□□□ 1.27
TSNARE1-205ENST00000520166 MTHFSP49914 203 aa22.99■■□□□ 1.27
TSNARE1-205ENST00000520166 NPHP3Q7Z494 1330 aa22.99■■□□□ 1.27
TSNARE1-205ENST00000520166 RRS1Q15050 365 aaKnown RBP22.99■■□□□ 1.27
TSNARE1-205ENST00000520166 MARF1Q9Y4F3 1742 aaKnown RBP22.98■■□□□ 1.27
TSNARE1-205ENST00000520166 USP31Q70CQ4 1352 aa22.97■■□□□ 1.27
TSNARE1-205ENST00000520166 UBAP1LF5GYI3 381 aa22.97■■□□□ 1.27
TSNARE1-205ENST00000520166 EMILIN1Q9Y6C2 1016 aa22.97■■□□□ 1.27
TSNARE1-205ENST00000520166 BRD4O60885 1362 aaPredicted RBP22.97■■□□□ 1.27
TSNARE1-205ENST00000520166 POLKQ9UBT6 870 aa22.96■■□□□ 1.27
TSNARE1-205ENST00000520166 ROBO1Q9Y6N7 1651 aa22.96■■□□□ 1.27
TSNARE1-205ENST00000520166 FAM9BQ8IZU0 186 aa22.96■■□□□ 1.27
TSNARE1-205ENST00000520166 SOS2Q07890 1332 aaPredicted RBP22.95■■□□□ 1.26
TSNARE1-205ENST00000520166 YTHDC1Q96MU7 727 aaKnown RBP22.95■■□□□ 1.26
TSNARE1-205ENST00000520166 SCAF1Q9H7N4 1312 aaKnown RBP22.94■■□□□ 1.26
TSNARE1-205ENST00000520166 PPM1GO15355 546 aaPredicted RBP22.94■■□□□ 1.26
TSNARE1-205ENST00000520166 TOM1O60784 492 aa22.94■■□□□ 1.26
TSNARE1-205ENST00000520166 CABLES1Q8TDN4 633 aa22.94■■□□□ 1.26
TSNARE1-205ENST00000520166 PNISRQ8TF01 805 aaKnown RBP22.94■■□□□ 1.26
TSNARE1-205ENST00000520166 SPATA31A3Q5VYP0 1347 aa22.93■■□□□ 1.26
TSNARE1-205ENST00000520166 SBNO1A3KN83 1393 aa22.92■■□□□ 1.26
TSNARE1-205ENST00000520166 ALS2Q96Q42 1657 aa22.92■■□□□ 1.26
TSNARE1-205ENST00000520166 SENP3-EIF4A1A0A087X0R7 540 aa22.91■■□□□ 1.26
TSNARE1-205ENST00000520166 MAP2P11137 1827 aaKnown RBP22.91■■□□□ 1.26
TSNARE1-205ENST00000520166 NHSL1Q5SYE7 1610 aa22.9■■□□□ 1.26
TSNARE1-205ENST00000520166 TNS3Q68CZ2 1445 aa22.9■■□□□ 1.26
TSNARE1-205ENST00000520166 AATKQ6ZMQ8 1374 aa22.88■■□□□ 1.25
TSNARE1-205ENST00000520166 MED1Q15648 1581 aaPredicted RBP22.87■■□□□ 1.25
TSNARE1-205ENST00000520166 MAP3K19Q56UN5 1328 aa22.87■■□□□ 1.25
TSNARE1-205ENST00000520166 GCP02774 474 aa22.87■■□□□ 1.25
TSNARE1-205ENST00000520166 USP54Q70EL1 1684 aa22.85■■□□□ 1.25
TSNARE1-205ENST00000520166 USP19O94966 1318 aa22.85■■□□□ 1.25
TSNARE1-205ENST00000520166 PEAK1Q9H792 1746 aa22.85■■□□□ 1.25
TSNARE1-205ENST00000520166 ZBTB7CA1YPR0 619 aa22.85■■□□□ 1.25
TSNARE1-205ENST00000520166 HSP90AB2PQ58FF8 381 aa22.84■■□□□ 1.25
TSNARE1-205ENST00000520166 ADAMTS8Q9UP79 889 aa22.84■■□□□ 1.25
TSNARE1-205ENST00000520166 ZC3H6P61129 1189 aaKnown RBP22.83■■□□□ 1.25
TSNARE1-205ENST00000520166 COL3A1P02461 1466 aaPredicted RBP22.83■■□□□ 1.24
TSNARE1-205ENST00000520166 IQSEC2Q5JU85 1478 aa22.83■■□□□ 1.24
TSNARE1-205ENST00000520166 NFAT5O94916 1531 aa22.83■■□□□ 1.24
TSNARE1-205ENST00000520166 PNPLA6Q8IY17 1366 aa22.82■■□□□ 1.24
TSNARE1-205ENST00000520166 AHDC1Q5TGY3 1603 aaPredicted RBP22.81■■□□□ 1.24
TSNARE1-205ENST00000520166 SMG6Q86US8 1419 aaKnown RBP22.81■■□□□ 1.24
TSNARE1-205ENST00000520166 SLIT3O75094 1523 aa22.81■■□□□ 1.24
TSNARE1-205ENST00000520166 ARHGEF10O15013 1369 aa22.8■■□□□ 1.24
TSNARE1-205ENST00000520166 CFAP53Q96M91 514 aa22.79■■□□□ 1.24
TSNARE1-205ENST00000520166 SHPRHQ149N8 1683 aa22.79■■□□□ 1.24
TSNARE1-205ENST00000520166 AMPHP49418 695 aa22.79■■□□□ 1.24
TSNARE1-205ENST00000520166 ARHGEF25Q86VW2 580 aa22.78■■□□□ 1.24
TSNARE1-205ENST00000520166 KCNH5Q8NCM2 988 aa22.78■■□□□ 1.24
TSNARE1-205ENST00000520166 LRRC59Q96AG4 307 aaKnown RBP22.78■■□□□ 1.24
TSNARE1-205ENST00000520166 PHLPP1O60346 1717 aa22.78■■□□□ 1.24
TSNARE1-205ENST00000520166 DIAPH1O60610 1272 aaKnown RBP22.77■■□□□ 1.23
TSNARE1-205ENST00000520166 HOXC9P31274 260 aa22.77■■□□□ 1.23
TSNARE1-205ENST00000520166 IL13P35225 146 aa22.77■■□□□ 1.23
TSNARE1-205ENST00000520166 INSRP06213 1382 aa22.76■■□□□ 1.23
TSNARE1-205ENST00000520166 CRYBG1Q9Y4K1 1723 aa22.76■■□□□ 1.23
TSNARE1-205ENST00000520166 EIF4A2Q14240 407 aaKnown RBP22.76■■□□□ 1.23
TSNARE1-205ENST00000520166 WDR43Q15061 677 aaKnown RBP eCLIP22.76■■□□□ 1.23
TSNARE1-205ENST00000520166 CHRNA2Q15822 529 aa22.76■■□□□ 1.23
TSNARE1-205ENST00000520166 AXIN2Q9Y2T1 843 aa22.76■■□□□ 1.23
TSNARE1-205ENST00000520166 COL16A1Q07092 1604 aaPredicted RBP22.76■■□□□ 1.23
TSNARE1-205ENST00000520166 CDK12Q9NYV4 1490 aaPredicted RBP22.75■■□□□ 1.23
TSNARE1-205ENST00000520166 PHRF1Q9P1Y6 1649 aaKnown RBP22.75■■□□□ 1.23
TSNARE1-205ENST00000520166 U2SURPO15042 1029 aaKnown RBP22.75■■□□□ 1.23
TSNARE1-205ENST00000520166 CCDC146Q8IYE0 955 aa22.75■■□□□ 1.23
TSNARE1-205ENST00000520166 LTN1O94822 1766 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms