RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 CCER2I3L3R5 266 aa29.16■■■□□ 2.26
PTP4A3-203ENST00000520105 ZRANB1Q9UGI0 708 aa29.16■■■□□ 2.26
PTP4A3-203ENST00000520105 NSD2O96028 1365 aa29.16■■■□□ 2.26
PTP4A3-203ENST00000520105 CCDC184Q52MB2 194 aa29.15■■■□□ 2.26
PTP4A3-203ENST00000520105 MYBBP1AQ9BQG0 1328 aaKnown RBP29.15■■■□□ 2.26
PTP4A3-203ENST00000520105 XPCQ01831 940 aaPredicted RBP29.14■■■□□ 2.26
PTP4A3-203ENST00000520105 NRKQ7Z2Y5 1582 aa29.14■■■□□ 2.26
PTP4A3-203ENST00000520105 TNNT2P45379 298 aaPredicted RBP29.14■■■□□ 2.26
PTP4A3-203ENST00000520105 KIF20BQ96Q89 1820 aa29.13■■■□□ 2.25
PTP4A3-203ENST00000520105 BRINP3Q76B58 766 aa29.12■■■□□ 2.25
PTP4A3-203ENST00000520105 DDX17Q92841 729 aaKnown RBP29.12■■■□□ 2.25
PTP4A3-203ENST00000520105 PAK3O75914 559 aaPredicted RBP29.12■■■□□ 2.25
PTP4A3-203ENST00000520105 KIF1AQ12756 1690 aa29.11■■■□□ 2.25
PTP4A3-203ENST00000520105 PPP2R1AP30153 589 aa29.1■■■□□ 2.25
PTP4A3-203ENST00000520105 TTC21AQ8NDW8 1320 aa29.09■■■□□ 2.25
PTP4A3-203ENST00000520105 KRT28Q7Z3Y7 464 aa29.08■■■□□ 2.25
PTP4A3-203ENST00000520105 NLRP13Q86W25 1043 aa29.06■■■□□ 2.24
PTP4A3-203ENST00000520105 MRS2Q9HD23 443 aa29.06■■■□□ 2.24
PTP4A3-203ENST00000520105 ANKRD26Q9UPS8 1709 aa29.06■■■□□ 2.24
PTP4A3-203ENST00000520105 COG3Q96JB2 828 aa29.06■■■□□ 2.24
PTP4A3-203ENST00000520105 BRD4O60885 1362 aaPredicted RBP29.04■■■□□ 2.24
PTP4A3-203ENST00000520105 ABTB2Q8N961 1025 aa29.04■■■□□ 2.24
PTP4A3-203ENST00000520105 NPHP3Q7Z494 1330 aa29.04■■■□□ 2.24
PTP4A3-203ENST00000520105 NUTM2GQ5VZR2 741 aa29.04■■■□□ 2.24
PTP4A3-203ENST00000520105 FBLN1P23142 703 aa29.03■■■□□ 2.24
PTP4A3-203ENST00000520105 NLRP6P59044 892 aa29.02■■■□□ 2.24
PTP4A3-203ENST00000520105 PIK3C2AO00443 1686 aa29.01■■■□□ 2.23
PTP4A3-203ENST00000520105 OVOS2A0A0J9YW53 1432 aa28.99■■■□□ 2.23
PTP4A3-203ENST00000520105 OVOS2Q6IE36 1432 aa28.99■■■□□ 2.23
PTP4A3-203ENST00000520105 USP31Q70CQ4 1352 aa28.98■■■□□ 2.23
PTP4A3-203ENST00000520105 TRPM3Q9HCF6 1732 aaPredicted RBP28.98■■■□□ 2.23
PTP4A3-203ENST00000520105 LMOD2Q6P5Q4 547 aa28.97■■■□□ 2.23
PTP4A3-203ENST00000520105 MTHFSP49914 203 aa28.96■■■□□ 2.23
PTP4A3-203ENST00000520105 PXDNQ92626 1479 aa28.95■■■□□ 2.23
PTP4A3-203ENST00000520105 TOM1O60784 492 aa28.95■■■□□ 2.23
PTP4A3-203ENST00000520105 CERKQ8TCT0 537 aa28.95■■■□□ 2.23
PTP4A3-203ENST00000520105 SCAF1Q9H7N4 1312 aaKnown RBP28.94■■■□□ 2.22
PTP4A3-203ENST00000520105 SOX12O15370 315 aa28.94■■■□□ 2.22
PTP4A3-203ENST00000520105 ROBO1Q9Y6N7 1651 aa28.92■■■□□ 2.22
PTP4A3-203ENST00000520105 SBNO1A3KN83 1393 aa28.92■■■□□ 2.22
PTP4A3-203ENST00000520105 SOS2Q07890 1332 aaPredicted RBP28.92■■■□□ 2.22
PTP4A3-203ENST00000520105 UBAP1LF5GYI3 381 aa28.91■■■□□ 2.22
PTP4A3-203ENST00000520105 POLKQ9UBT6 870 aa28.91■■■□□ 2.22
PTP4A3-203ENST00000520105 MAP2P11137 1827 aaKnown RBP28.91■■■□□ 2.22
PTP4A3-203ENST00000520105 PLEKHG5O94827 1062 aa28.91■■■□□ 2.22
PTP4A3-203ENST00000520105 PIP4K2BP78356 416 aa28.91■■■□□ 2.22
PTP4A3-203ENST00000520105 MARF1Q9Y4F3 1742 aaKnown RBP28.91■■■□□ 2.22
PTP4A3-203ENST00000520105 RRS1Q15050 365 aaKnown RBP28.9■■■□□ 2.22
PTP4A3-203ENST00000520105 FAM9BQ8IZU0 186 aa28.9■■■□□ 2.22
PTP4A3-203ENST00000520105 PNISRQ8TF01 805 aaKnown RBP28.89■■■□□ 2.22
PTP4A3-203ENST00000520105 AATKQ6ZMQ8 1374 aa28.89■■■□□ 2.22
PTP4A3-203ENST00000520105 SPATA31A3Q5VYP0 1347 aa28.89■■■□□ 2.22
PTP4A3-203ENST00000520105 PPM1GO15355 546 aaPredicted RBP28.88■■■□□ 2.21
PTP4A3-203ENST00000520105 EMILIN1Q9Y6C2 1016 aa28.88■■■□□ 2.21
PTP4A3-203ENST00000520105 ALS2Q96Q42 1657 aa28.88■■■□□ 2.21
PTP4A3-203ENST00000520105 NHSL1Q5SYE7 1610 aa28.88■■■□□ 2.21
PTP4A3-203ENST00000520105 IQSEC2Q5JU85 1478 aa28.87■■■□□ 2.21
PTP4A3-203ENST00000520105 TNS3Q68CZ2 1445 aa28.86■■■□□ 2.21
PTP4A3-203ENST00000520105 USP54Q70EL1 1684 aa28.86■■■□□ 2.21
PTP4A3-203ENST00000520105 YTHDC1Q96MU7 727 aaKnown RBP28.85■■■□□ 2.21
PTP4A3-203ENST00000520105 CFAP53Q96M91 514 aa28.82■■■□□ 2.2
PTP4A3-203ENST00000520105 GCP02774 474 aa28.8■■■□□ 2.2
PTP4A3-203ENST00000520105 USP19O94966 1318 aa28.8■■■□□ 2.2
PTP4A3-203ENST00000520105 MAP3K19Q56UN5 1328 aa28.8■■■□□ 2.2
PTP4A3-203ENST00000520105 ARHGEF10O15013 1369 aa28.8■■■□□ 2.2
PTP4A3-203ENST00000520105 CABLES1Q8TDN4 633 aa28.79■■■□□ 2.2
PTP4A3-203ENST00000520105 KCNH5Q8NCM2 988 aa28.78■■■□□ 2.2
PTP4A3-203ENST00000520105 PNPLA6Q8IY17 1366 aa28.78■■■□□ 2.2
PTP4A3-203ENST00000520105 AHDC1Q5TGY3 1603 aaPredicted RBP28.77■■■□□ 2.2
PTP4A3-203ENST00000520105 SMG6Q86US8 1419 aaKnown RBP28.77■■■□□ 2.2
PTP4A3-203ENST00000520105 MED1Q15648 1581 aaPredicted RBP28.77■■■□□ 2.2
PTP4A3-203ENST00000520105 SLIT3O75094 1523 aa28.76■■■□□ 2.19
PTP4A3-203ENST00000520105 LRRC59Q96AG4 307 aaKnown RBP28.75■■■□□ 2.19
PTP4A3-203ENST00000520105 NFAT5O94916 1531 aa28.74■■■□□ 2.19
PTP4A3-203ENST00000520105 WDR43Q15061 677 aaKnown RBP eCLIP28.74■■■□□ 2.19
PTP4A3-203ENST00000520105 ADAMTS8Q9UP79 889 aa28.74■■■□□ 2.19
PTP4A3-203ENST00000520105 INSRP06213 1382 aa28.73■■■□□ 2.19
PTP4A3-203ENST00000520105 COL3A1P02461 1466 aaPredicted RBP28.73■■■□□ 2.19
PTP4A3-203ENST00000520105 AMPHP49418 695 aa28.73■■■□□ 2.19
PTP4A3-203ENST00000520105 PEAK1Q9H792 1746 aa28.73■■■□□ 2.19
PTP4A3-203ENST00000520105 CDK12Q9NYV4 1490 aaPredicted RBP28.73■■■□□ 2.19
PTP4A3-203ENST00000520105 ZBTB7CA1YPR0 619 aa28.72■■■□□ 2.19
PTP4A3-203ENST00000520105 DIAPH1O60610 1272 aaKnown RBP28.72■■■□□ 2.19
PTP4A3-203ENST00000520105 HSP90AB2PQ58FF8 381 aa28.72■■■□□ 2.19
PTP4A3-203ENST00000520105 PHLPP1O60346 1717 aa28.7■■■□□ 2.19
PTP4A3-203ENST00000520105 ZC3H6P61129 1189 aaKnown RBP28.7■■■□□ 2.19
PTP4A3-203ENST00000520105 SHPRHQ149N8 1683 aa28.7■■■□□ 2.18
PTP4A3-203ENST00000520105 ARHGEF25Q86VW2 580 aa28.7■■■□□ 2.18
PTP4A3-203ENST00000520105 FLT4P35916 1363 aa28.68■■■□□ 2.18
PTP4A3-203ENST00000520105 LTN1O94822 1766 aa28.68■■■□□ 2.18
PTP4A3-203ENST00000520105 HOXC9P31274 260 aa28.68■■■□□ 2.18
PTP4A3-203ENST00000520105 PHRF1Q9P1Y6 1649 aaKnown RBP28.67■■■□□ 2.18
PTP4A3-203ENST00000520105 U2SURPO15042 1029 aaKnown RBP28.67■■■□□ 2.18
PTP4A3-203ENST00000520105 NUDCQ9Y266 331 aa28.67■■■□□ 2.18
PTP4A3-203ENST00000520105 CRYBG1Q9Y4K1 1723 aa28.67■■■□□ 2.18
PTP4A3-203ENST00000520105 IL13P35225 146 aa28.66■■■□□ 2.18
PTP4A3-203ENST00000520105 COL16A1Q07092 1604 aaPredicted RBP28.66■■■□□ 2.18
PTP4A3-203ENST00000520105 U2AF1L5P0DN76 240 aaPredicted RBP28.65■■■□□ 2.18
PTP4A3-203ENST00000520105 U2AF1Q01081 240 aaKnown RBP eCLIP28.65■■■□□ 2.18
PTP4A3-203ENST00000520105 EIF4A2Q14240 407 aaKnown RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms