RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 FNBP4Q8N3X1 1017 aaPredicted RBP10.76□□□□□ -0.69
NPM1-206ENST00000519955 FKBPLQ9UIM3 349 aa10.76□□□□□ -0.69
NPM1-206ENST00000519955 ZC3H4Q9UPT8 1303 aaKnown RBP10.76□□□□□ -0.69
NPM1-206ENST00000519955 TRAK2O60296 914 aa10.75□□□□□ -0.69
NPM1-206ENST00000519955 RNF223E7ERA6 249 aa10.74□□□□□ -0.69
NPM1-206ENST00000519955 PPP1R18Q6NYC8 613 aa10.74□□□□□ -0.69
NPM1-206ENST00000519955 ANKLE1Q8NAG6 615 aa10.74□□□□□ -0.69
NPM1-206ENST00000519955 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.74□□□□□ -0.69
NPM1-206ENST00000519955 GPR37L1O60883 481 aa10.73□□□□□ -0.69
NPM1-206ENST00000519955 GPKOWQ92917 476 aaPredicted RBP eCLIP10.73□□□□□ -0.69
NPM1-206ENST00000519955 UNC93B1Q9H1C4 597 aa10.73□□□□□ -0.69
NPM1-206ENST00000519955 PPEF1O14829 653 aaPredicted RBP10.72□□□□□ -0.69
NPM1-206ENST00000519955 IRF5Q13568 498 aa10.72□□□□□ -0.69
NPM1-206ENST00000519955 WASHC4Q2M389 1173 aa10.72□□□□□ -0.69
NPM1-206ENST00000519955 NBPF14Q5TI25 921 aa10.72□□□□□ -0.69
NPM1-206ENST00000519955 PTCRAQ6ISU1 281 aaPredicted RBP10.72□□□□□ -0.69
NPM1-206ENST00000519955 ZNF330Q9Y3S2 320 aaPredicted RBP10.71□□□□□ -0.69
NPM1-206ENST00000519955 ZBTB24O43167 697 aaPredicted RBP10.69□□□□□ -0.7
NPM1-206ENST00000519955 PDXDC2PQ6P474 469 aa10.68□□□□□ -0.7
NPM1-206ENST00000519955 GPSM3Q9Y4H4 160 aa10.68□□□□□ -0.7
NPM1-206ENST00000519955 SUPT5HO00267 1087 aaKnown RBP10.67□□□□□ -0.7
NPM1-206ENST00000519955 ZBBXA8MT70 800 aa10.66□□□□□ -0.7
NPM1-206ENST00000519955 PTK2Q05397 1052 aa10.66□□□□□ -0.7
NPM1-206ENST00000519955 RPIAP49247 311 aa10.65□□□□□ -0.7
NPM1-206ENST00000519955 NR1H3Q13133 447 aa10.65□□□□□ -0.7
NPM1-206ENST00000519955 PLA2G2CQ5R387 149 aa10.65□□□□□ -0.7
NPM1-206ENST00000519955 BAP1Q92560 729 aa10.64□□□□□ -0.71
NPM1-206ENST00000519955 FBXO45P0C2W1 286 aa10.63□□□□□ -0.71
NPM1-206ENST00000519955 VAC14Q08AM6 782 aa10.63□□□□□ -0.71
NPM1-206ENST00000519955 TRIM32Q13049 653 aa10.63□□□□□ -0.71
NPM1-206ENST00000519955 ZNF511Q8NB15 262 aa10.63□□□□□ -0.71
NPM1-206ENST00000519955 ZNF777Q9ULD5 760 aaPredicted RBP10.63□□□□□ -0.71
NPM1-206ENST00000519955 SOX11P35716 441 aa10.62□□□□□ -0.71
NPM1-206ENST00000519955 SH3BP5LQ7L8J4 393 aa10.62□□□□□ -0.71
NPM1-206ENST00000519955 POM121CA8CG34 1229 aa10.61□□□□□ -0.71
NPM1-206ENST00000519955 EIF4G2P78344 907 aaKnown RBP eCLIP10.61□□□□□ -0.71
NPM1-206ENST00000519955 LINC01559Q495D7 138 aa10.61□□□□□ -0.71
NPM1-206ENST00000519955 BPHLQ86WA6 291 aaPredicted RBP10.61□□□□□ -0.71
NPM1-206ENST00000519955 ARHGAP9Q9BRR9 750 aa10.61□□□□□ -0.71
NPM1-206ENST00000519955 ARID3CA6NKF2 412 aa10.6□□□□□ -0.71
NPM1-206ENST00000519955 CD2BP2O95400 341 aaKnown RBP10.6□□□□□ -0.71
NPM1-206ENST00000519955 WNT7BP56706 349 aa10.6□□□□□ -0.71
NPM1-206ENST00000519955 ZNF592Q92610 1267 aa10.6□□□□□ -0.71
NPM1-206ENST00000519955 SH3BP2P78314 561 aa10.59□□□□□ -0.71
NPM1-206ENST00000519955 AGERQ15109 404 aa10.59□□□□□ -0.71
NPM1-206ENST00000519955 SH3RF1Q7Z6J0 888 aa10.59□□□□□ -0.71
NPM1-206ENST00000519955 Q6ZNB5 142 aa10.58□□□□□ -0.72
NPM1-206ENST00000519955 LIAT1Q6ZQX7 453 aa10.58□□□□□ -0.72
NPM1-206ENST00000519955 ZBTB33Q86T24 672 aa10.58□□□□□ -0.72
NPM1-206ENST00000519955 GLMNQ92990 594 aa10.58□□□□□ -0.72
NPM1-206ENST00000519955 OCSTAMPQ9BR26 566 aa10.58□□□□□ -0.72
NPM1-206ENST00000519955 SLC19A1P41440 591 aa10.57□□□□□ -0.72
NPM1-206ENST00000519955 MCCD1P59942 119 aaPredicted RBP10.57□□□□□ -0.72
NPM1-206ENST00000519955 FOXJ1Q92949 421 aa10.57□□□□□ -0.72
NPM1-206ENST00000519955 CALR3Q96L12 384 aaKnown RBP10.57□□□□□ -0.72
NPM1-206ENST00000519955 C1orf115Q9H7X2 142 aa10.57□□□□□ -0.72
NPM1-206ENST00000519955 MAGEB6P1A0A0J9YX57 407 aa10.56□□□□□ -0.72
NPM1-206ENST00000519955 LCE2BO14633 110 aa10.56□□□□□ -0.72
NPM1-206ENST00000519955 SEMA3FQ13275 785 aa10.56□□□□□ -0.72
NPM1-206ENST00000519955 ADAM32Q8TC27 787 aa10.56□□□□□ -0.72
NPM1-206ENST00000519955 ALG2Q9H553 416 aa10.56□□□□□ -0.72
NPM1-206ENST00000519955 HDGFL1Q5TGJ6 251 aa10.55□□□□□ -0.72
NPM1-206ENST00000519955 EMID1Q96A84 441 aaPredicted RBP10.55□□□□□ -0.72
NPM1-206ENST00000519955 CARD14Q9BXL6 1004 aa10.55□□□□□ -0.72
NPM1-206ENST00000519955 SKOR1P84550 965 aa10.54□□□□□ -0.72
NPM1-206ENST00000519955 C4orf48Q5BLP8 95 aa10.54□□□□□ -0.72
NPM1-206ENST00000519955 VARSP26640 1264 aaKnown RBP10.53□□□□□ -0.72
NPM1-206ENST00000519955 ERFEQ4G0M1 354 aa10.53□□□□□ -0.72
NPM1-206ENST00000519955 ADAMTS19Q8TE59 1207 aa10.53□□□□□ -0.72
NPM1-206ENST00000519955 C1QTNF2Q9BXJ5 285 aa10.53□□□□□ -0.72
NPM1-206ENST00000519955 SERPINA10Q9UK55 444 aa10.53□□□□□ -0.72
NPM1-206ENST00000519955 PCDHB9Q9Y5E1 797 aa10.53□□□□□ -0.72
NPM1-206ENST00000519955 CCDC97Q96F63 343 aaPredicted RBP10.52□□□□□ -0.73
NPM1-206ENST00000519955 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
NPM1-206ENST00000519955 SPRYD7Q5W111 196 aa10.51□□□□□ -0.73
NPM1-206ENST00000519955 DZIP3Q86Y13 1208 aaKnown RBP10.51□□□□□ -0.73
NPM1-206ENST00000519955 TRMT44Q8IYL2 757 aaKnown RBP10.51□□□□□ -0.73
NPM1-206ENST00000519955 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
NPM1-206ENST00000519955 FAM174AQ8TBP5 190 aa10.51□□□□□ -0.73
NPM1-206ENST00000519955 RC3H1Q5TC82 1133 aaKnown RBP10.5□□□□□ -0.73
NPM1-206ENST00000519955 EHBP1Q8NDI1 1231 aa10.5□□□□□ -0.73
NPM1-206ENST00000519955 SLC10A4Q96EP9 437 aa10.5□□□□□ -0.73
NPM1-206ENST00000519955 PRKD2Q9BZL6 878 aa10.5□□□□□ -0.73
NPM1-206ENST00000519955 CDV3Q9UKY7 258 aaKnown RBP10.5□□□□□ -0.73
NPM1-206ENST00000519955 WNT7AO00755 349 aa10.48□□□□□ -0.73
NPM1-206ENST00000519955 ZNF598Q86UK7 904 aaKnown RBP10.48□□□□□ -0.73
NPM1-206ENST00000519955 NBPF20Q3BBV1 942 aa10.47□□□□□ -0.73
NPM1-206ENST00000519955 ZNF697Q5TEC3 545 aa10.47□□□□□ -0.73
NPM1-206ENST00000519955 CEP126Q9P2H0 1117 aa10.47□□□□□ -0.73
NPM1-206ENST00000519955 MPNDQ8N594 471 aa10.45□□□□□ -0.74
NPM1-206ENST00000519955 MAP4K5Q9Y4K4 846 aa10.45□□□□□ -0.74
NPM1-206ENST00000519955 SLFNL1Q499Z3 407 aa10.44□□□□□ -0.74
NPM1-206ENST00000519955 NFATC2IPQ8NCF5 419 aa10.44□□□□□ -0.74
NPM1-206ENST00000519955 UCN2Q96RP3 112 aa10.44□□□□□ -0.74
NPM1-206ENST00000519955 ARID3AQ99856 593 aa10.44□□□□□ -0.74
NPM1-206ENST00000519955 MRGPRX2Q96LB1 330 aa10.43□□□□□ -0.74
NPM1-206ENST00000519955 CDK15Q96Q40 435 aa10.43□□□□□ -0.74
NPM1-206ENST00000519955 PPP1R12CQ9BZL4 782 aa10.43□□□□□ -0.74
NPM1-206ENST00000519955 SIAH2O43255 324 aa10.42□□□□□ -0.74
NPM1-206ENST00000519955 RNF20Q5VTR2 975 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms