RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 NFKBIBQ15653 356 aa13.07□□□□□ -0.32
SH2D4A-204ENST00000519207 TMEM132EQ6IEE7 984 aa13.07□□□□□ -0.32
SH2D4A-204ENST00000519207 CENPQQ7L2Z9 268 aaPredicted RBP13.07□□□□□ -0.32
SH2D4A-204ENST00000519207 FRAT1Q92837 279 aaPredicted RBP13.07□□□□□ -0.32
SH2D4A-204ENST00000519207 SLC12A5Q9H2X9 1139 aa13.07□□□□□ -0.32
SH2D4A-204ENST00000519207 NSD2O96028 1365 aa13.06□□□□□ -0.32
SH2D4A-204ENST00000519207 SHPRHQ149N8 1683 aa13.06□□□□□ -0.32
SH2D4A-204ENST00000519207 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
SH2D4A-204ENST00000519207 DDRGK1Q96HY6 314 aa13.05□□□□□ -0.32
SH2D4A-204ENST00000519207 ANKRD36BQ8N2N9 1353 aa13.04□□□□□ -0.32
SH2D4A-204ENST00000519207 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
SH2D4A-204ENST00000519207 TULP4Q9NRJ4 1543 aa13.04□□□□□ -0.32
SH2D4A-204ENST00000519207 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
SH2D4A-204ENST00000519207 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
SH2D4A-204ENST00000519207 WWC1Q8IX03 1113 aa13.03□□□□□ -0.32
SH2D4A-204ENST00000519207 RUNDC1Q96C34 613 aa13.03□□□□□ -0.32
SH2D4A-204ENST00000519207 SLC26A8Q96RN1 970 aa13.03□□□□□ -0.32
SH2D4A-204ENST00000519207 GLIPR1L2Q4G1C9 344 aa13.01□□□□□ -0.33
SH2D4A-204ENST00000519207 CFAP53Q96M91 514 aa13.01□□□□□ -0.33
SH2D4A-204ENST00000519207 TMEM131LA2VDJ0 1609 aa13.01□□□□□ -0.33
SH2D4A-204ENST00000519207 KCNA6P17658 529 aa13□□□□□ -0.33
SH2D4A-204ENST00000519207 PDE3AQ14432 1141 aa13□□□□□ -0.33
SH2D4A-204ENST00000519207 RBM33Q96EV2 1170 aaKnown RBP13□□□□□ -0.33
SH2D4A-204ENST00000519207 MYO5BQ9ULV0 1848 aa13□□□□□ -0.33
SH2D4A-204ENST00000519207 MED1Q15648 1581 aaPredicted RBP13□□□□□ -0.33
SH2D4A-204ENST00000519207 MTHFSP49914 203 aa13□□□□□ -0.33
SH2D4A-204ENST00000519207 CCDC27Q2M243 656 aa13□□□□□ -0.33
SH2D4A-204ENST00000519207 WDR63Q8IWG1 891 aa13□□□□□ -0.33
SH2D4A-204ENST00000519207 ZMYND15Q9H091 742 aa12.99□□□□□ -0.33
SH2D4A-204ENST00000519207 XIRP1Q702N8 1843 aaKnown RBP12.98□□□□□ -0.33
SH2D4A-204ENST00000519207 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
SH2D4A-204ENST00000519207 BCAR3O75815 825 aa12.98□□□□□ -0.33
SH2D4A-204ENST00000519207 NUTM2DQ5VT03 806 aaPredicted RBP12.98□□□□□ -0.33
SH2D4A-204ENST00000519207 NPM2Q86SE8 214 aaKnown RBP12.98□□□□□ -0.33
SH2D4A-204ENST00000519207 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
SH2D4A-204ENST00000519207 TCP11L2Q8N4U5 519 aa12.98□□□□□ -0.33
SH2D4A-204ENST00000519207 ABCC11Q96J66 1382 aa12.97□□□□□ -0.33
SH2D4A-204ENST00000519207 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
SH2D4A-204ENST00000519207 ATAD2Q6PL18 1390 aa12.97□□□□□ -0.33
SH2D4A-204ENST00000519207 AAMPQ13685 434 aa12.96□□□□□ -0.33
SH2D4A-204ENST00000519207 CABP2Q9NPB3 220 aa12.96□□□□□ -0.34
SH2D4A-204ENST00000519207 YTHDC2Q9H6S0 1430 aaKnown RBP12.94□□□□□ -0.34
SH2D4A-204ENST00000519207 HDGFP51858 240 aaKnown RBP12.94□□□□□ -0.34
SH2D4A-204ENST00000519207 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
SH2D4A-204ENST00000519207 ANKRD26Q9UPS8 1709 aa12.94□□□□□ -0.34
SH2D4A-204ENST00000519207 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
SH2D4A-204ENST00000519207 FAM135BQ49AJ0 1406 aa12.94□□□□□ -0.34
SH2D4A-204ENST00000519207 RIMS2Q9UQ26 1411 aa12.94□□□□□ -0.34
SH2D4A-204ENST00000519207 FAM161AQ3B820 660 aa12.94□□□□□ -0.34
SH2D4A-204ENST00000519207 SKAP1Q86WV1 359 aa12.93□□□□□ -0.34
SH2D4A-204ENST00000519207 TERF2IPQ9NYB0 399 aa12.93□□□□□ -0.34
SH2D4A-204ENST00000519207 PLEKHG1Q9ULL1 1385 aa12.93□□□□□ -0.34
SH2D4A-204ENST00000519207 RRP9O43818 475 aaKnown RBP12.92□□□□□ -0.34
SH2D4A-204ENST00000519207 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
SH2D4A-204ENST00000519207 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
SH2D4A-204ENST00000519207 RRAGDQ9NQL2 400 aaPredicted RBP12.92□□□□□ -0.34
SH2D4A-204ENST00000519207 STK26Q9P289 416 aa12.92□□□□□ -0.34
SH2D4A-204ENST00000519207 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
SH2D4A-204ENST00000519207 MYH16Q9H6N6 1097 aa12.92□□□□□ -0.34
SH2D4A-204ENST00000519207 RRP7AQ9Y3A4 280 aaKnown RBP12.92□□□□□ -0.34
SH2D4A-204ENST00000519207 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
SH2D4A-204ENST00000519207 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
SH2D4A-204ENST00000519207 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
SH2D4A-204ENST00000519207 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
SH2D4A-204ENST00000519207 CLUAP1Q96AJ1 413 aa12.91□□□□□ -0.34
SH2D4A-204ENST00000519207 TBX22Q9Y458 520 aa12.91□□□□□ -0.34
SH2D4A-204ENST00000519207 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
SH2D4A-204ENST00000519207 C8orf34Q49A92 452 aa12.9□□□□□ -0.34
SH2D4A-204ENST00000519207 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.9□□□□□ -0.34
SH2D4A-204ENST00000519207 PRAM1Q96QH2 718 aa12.9□□□□□ -0.34
SH2D4A-204ENST00000519207 POGKQ9P215 609 aa12.9□□□□□ -0.34
SH2D4A-204ENST00000519207 CD163L1Q9NR16 1453 aa12.9□□□□□ -0.34
SH2D4A-204ENST00000519207 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
SH2D4A-204ENST00000519207 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
SH2D4A-204ENST00000519207 COL3A1P02461 1466 aaPredicted RBP12.9□□□□□ -0.34
SH2D4A-204ENST00000519207 DLC1Q96QB1 1528 aa12.89□□□□□ -0.35
SH2D4A-204ENST00000519207 SLAIN2Q9P270 581 aa12.89□□□□□ -0.35
SH2D4A-204ENST00000519207 RGS17Q9UGC6 210 aaPredicted RBP12.89□□□□□ -0.35
SH2D4A-204ENST00000519207 MSH6P52701 1360 aa12.89□□□□□ -0.35
SH2D4A-204ENST00000519207 FYB1O15117 783 aa12.89□□□□□ -0.35
SH2D4A-204ENST00000519207 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
SH2D4A-204ENST00000519207 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
SH2D4A-204ENST00000519207 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
SH2D4A-204ENST00000519207 IGHDP01880 384 aa12.88□□□□□ -0.35
SH2D4A-204ENST00000519207 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
SH2D4A-204ENST00000519207 PANK1Q8TE04 598 aa12.88□□□□□ -0.35
SH2D4A-204ENST00000519207 PLEKHF1Q96S99 279 aa12.88□□□□□ -0.35
SH2D4A-204ENST00000519207 COG6Q9Y2V7 657 aa12.88□□□□□ -0.35
SH2D4A-204ENST00000519207 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
SH2D4A-204ENST00000519207 FRAT2O75474 233 aaPredicted RBP12.87□□□□□ -0.35
SH2D4A-204ENST00000519207 MAPK8IP3Q9UPT6 1336 aa12.87□□□□□ -0.35
SH2D4A-204ENST00000519207 ROBO1Q9Y6N7 1651 aa12.87□□□□□ -0.35
SH2D4A-204ENST00000519207 PMFBP1Q8TBY8 1022 aa12.87□□□□□ -0.35
SH2D4A-204ENST00000519207 GGNBP2Q9H3C7 697 aa12.87□□□□□ -0.35
SH2D4A-204ENST00000519207 PNPLA6Q8IY17 1366 aa12.86□□□□□ -0.35
SH2D4A-204ENST00000519207 KIF20BQ96Q89 1820 aa12.86□□□□□ -0.35
SH2D4A-204ENST00000519207 RGS3P49796 1198 aa12.86□□□□□ -0.35
SH2D4A-204ENST00000519207 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
SH2D4A-204ENST00000519207 PNNQ9H307 717 aaKnown RBP12.86□□□□□ -0.35
SH2D4A-204ENST00000519207 IL16Q14005 1332 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms