RNA–Protein interactions for RNA: ENST00000518936.5

PCM1-210, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-210ENST00000518936 ARHGEF10O15013 1369 aa29.26■■■□□ 2.27
PCM1-210ENST00000518936 CGNL1Q0VF96 1302 aa29.23■■■□□ 2.27
PCM1-210ENST00000518936 PAK3O75914 559 aaPredicted RBP29.23■■■□□ 2.27
PCM1-210ENST00000518936 TNS3Q68CZ2 1445 aa29.22■■■□□ 2.27
PCM1-210ENST00000518936 NRKQ7Z2Y5 1582 aa29.22■■■□□ 2.27
PCM1-210ENST00000518936 NSD3Q9BZ95 1437 aa29.21■■■□□ 2.27
PCM1-210ENST00000518936 TRPM3Q9HCF6 1732 aaPredicted RBP29.21■■■□□ 2.27
PCM1-210ENST00000518936 TTC21BQ7Z4L5 1316 aa29.2■■■□□ 2.27
PCM1-210ENST00000518936 NSD2O96028 1365 aa29.2■■■□□ 2.26
PCM1-210ENST00000518936 SSH2Q76I76 1423 aa29.2■■■□□ 2.26
PCM1-210ENST00000518936 ILDR2Q71H61 639 aa29.19■■■□□ 2.26
PCM1-210ENST00000518936 SPATA31A3Q5VYP0 1347 aa29.19■■■□□ 2.26
PCM1-210ENST00000518936 COL16A1Q07092 1604 aaPredicted RBP29.18■■■□□ 2.26
PCM1-210ENST00000518936 ABTB2Q8N961 1025 aa29.17■■■□□ 2.26
PCM1-210ENST00000518936 DDX10Q13206 875 aaKnown RBP29.16■■■□□ 2.26
PCM1-210ENST00000518936 NLRP13Q86W25 1043 aa29.16■■■□□ 2.26
PCM1-210ENST00000518936 SOCS7O14512 581 aa29.15■■■□□ 2.26
PCM1-210ENST00000518936 XPCQ01831 940 aaPredicted RBP29.15■■■□□ 2.26
PCM1-210ENST00000518936 DDX17Q92841 729 aaKnown RBP29.15■■■□□ 2.26
PCM1-210ENST00000518936 KIF20BQ96Q89 1820 aa29.15■■■□□ 2.26
PCM1-210ENST00000518936 ALS2Q96Q42 1657 aa29.15■■■□□ 2.26
PCM1-210ENST00000518936 LMOD2Q6P5Q4 547 aa29.14■■■□□ 2.26
PCM1-210ENST00000518936 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.14■■■□□ 2.262e-9■■□□□ 14.3
PCM1-210ENST00000518936 NPC1L1Q9UHC9 1359 aa29.13■■■□□ 2.25
PCM1-210ENST00000518936 CARD14Q9BXL6 1004 aa29.13■■■□□ 2.25
PCM1-210ENST00000518936 JCADQ9P266 1359 aa29.13■■■□□ 2.25
PCM1-210ENST00000518936 USP31Q70CQ4 1352 aa29.11■■■□□ 2.25
PCM1-210ENST00000518936 COG3Q96JB2 828 aa29.1■■■□□ 2.25
PCM1-210ENST00000518936 SHPRHQ149N8 1683 aa29.09■■■□□ 2.25
PCM1-210ENST00000518936 USP54Q70EL1 1684 aa29.09■■■□□ 2.25
PCM1-210ENST00000518936 PER1O15534 1290 aaPredicted RBP29.09■■■□□ 2.25
PCM1-210ENST00000518936 NLRP6P59044 892 aa29.09■■■□□ 2.25
PCM1-210ENST00000518936 HSPA1LP34931 641 aa29.08■■■□□ 2.25
PCM1-210ENST00000518936 MED1Q15648 1581 aaPredicted RBP29.08■■■□□ 2.25
PCM1-210ENST00000518936 PIK3C2AO00443 1686 aa29.08■■■□□ 2.25
PCM1-210ENST00000518936 KCNH5Q8NCM2 988 aa29.07■■■□□ 2.24
PCM1-210ENST00000518936 COL22A1Q8NFW1 1626 aaPredicted RBP29.07■■■□□ 2.24
PCM1-210ENST00000518936 ANKRD26Q9UPS8 1709 aa29.06■■■□□ 2.24
PCM1-210ENST00000518936 FYB1O15117 783 aa29.05■■■□□ 2.24
PCM1-210ENST00000518936 PNPLA6Q8IY17 1366 aa29.04■■■□□ 2.24
PCM1-210ENST00000518936 SPATA31A6Q5VVP1 1343 aa29.04■■■□□ 2.24
PCM1-210ENST00000518936 HAP1P54257 671 aaPredicted RBP29.04■■■□□ 2.24
PCM1-210ENST00000518936 NME9Q86XW9 330 aa29.03■■■□□ 2.24
PCM1-210ENST00000518936 AMER1Q5JTC6 1135 aaPredicted RBP29.02■■■□□ 2.24
PCM1-210ENST00000518936 OVOS2A0A0J9YW53 1432 aa29.02■■■□□ 2.24
PCM1-210ENST00000518936 OVOS2Q6IE36 1432 aa29.02■■■□□ 2.24
PCM1-210ENST00000518936 USP19O94966 1318 aa29■■■□□ 2.23
PCM1-210ENST00000518936 MORC1Q86VD1 984 aa28.99■■■□□ 2.23
PCM1-210ENST00000518936 GGNBP2Q9H3C7 697 aa28.99■■■□□ 2.23
PCM1-210ENST00000518936 SLIT3O75094 1523 aa28.97■■■□□ 2.23
PCM1-210ENST00000518936 PHRF1Q9P1Y6 1649 aaKnown RBP28.95■■■□□ 2.23
PCM1-210ENST00000518936 NUTM2GQ5VZR2 741 aa28.95■■■□□ 2.22
PCM1-210ENST00000518936 GCP02774 474 aa28.94■■■□□ 2.22
PCM1-210ENST00000518936 RALBP1Q15311 655 aa28.94■■■□□ 2.22
PCM1-210ENST00000518936 CC2D1BQ5T0F9 858 aaKnown RBP28.93■■■□□ 2.22
PCM1-210ENST00000518936 ABCA3Q99758 1704 aa28.92■■■□□ 2.22
PCM1-210ENST00000518936 CRYBG1Q9Y4K1 1723 aa28.92■■■□□ 2.22
PCM1-210ENST00000518936 AATKQ6ZMQ8 1374 aa28.91■■■□□ 2.22
PCM1-210ENST00000518936 ANP32CO43423 234 aa28.9■■■□□ 2.22
PCM1-210ENST00000518936 MARF1Q9Y4F3 1742 aaKnown RBP28.9■■■□□ 2.22
PCM1-210ENST00000518936 KIF24Q5T7B8 1368 aa28.89■■■□□ 2.22
PCM1-210ENST00000518936 CPDO75976 1380 aa28.88■■■□□ 2.21
PCM1-210ENST00000518936 ABCC6O95255 1503 aa28.88■■■□□ 2.21
PCM1-210ENST00000518936 ZRANB1Q9UGI0 708 aa28.86■■■□□ 2.21
PCM1-210ENST00000518936 NFAT5O94916 1531 aa28.85■■■□□ 2.21
PCM1-210ENST00000518936 PARD3Q8TEW0 1356 aa28.85■■■□□ 2.21
PCM1-210ENST00000518936 CABLES1Q8TDN4 633 aa28.84■■■□□ 2.21
PCM1-210ENST00000518936 RTL1A6NKG5 1358 aa28.84■■■□□ 2.21
PCM1-210ENST00000518936 DIEXFQ68CQ4 756 aaKnown RBP28.83■■■□□ 2.21
PCM1-210ENST00000518936 PRDM11Q9NQV5 511 aa28.83■■■□□ 2.21
PCM1-210ENST00000518936 NUTM2BA6NNL0 878 aaPredicted RBP28.82■■■□□ 2.2
PCM1-210ENST00000518936 NUTM2EB1AL46 878 aaPredicted RBP28.82■■■□□ 2.2
PCM1-210ENST00000518936 PLEKHG5O94827 1062 aa28.82■■■□□ 2.2
PCM1-210ENST00000518936 MEX3CQ5U5Q3 659 aaKnown RBP28.82■■■□□ 2.2
PCM1-210ENST00000518936 NUTM2AQ8IVF1 878 aaPredicted RBP28.82■■■□□ 2.2
PCM1-210ENST00000518936 MAP2P11137 1827 aaKnown RBP28.8■■■□□ 2.2
PCM1-210ENST00000518936 LTN1O94822 1766 aa28.8■■■□□ 2.2
PCM1-210ENST00000518936 SOX12O15370 315 aa28.8■■■□□ 2.2
PCM1-210ENST00000518936 ARHGEF25Q86VW2 580 aa28.8■■■□□ 2.2
PCM1-210ENST00000518936 PRKRIP1Q9H875 184 aaPredicted RBP28.8■■■□□ 2.2
PCM1-210ENST00000518936 COL14A1Q05707 1796 aaKnown RBP28.8■■■□□ 2.2
PCM1-210ENST00000518936 AMPHP49418 695 aa28.79■■■□□ 2.2
PCM1-210ENST00000518936 KIAA0232Q92628 1395 aa28.78■■■□□ 2.2
PCM1-210ENST00000518936 MYBBP1AQ9BQG0 1328 aaKnown RBP28.78■■■□□ 2.2
PCM1-210ENST00000518936 TNNT2P45379 298 aaPredicted RBP28.78■■■□□ 2.2
PCM1-210ENST00000518936 ZC3H6P61129 1189 aaKnown RBP28.78■■■□□ 2.2
PCM1-210ENST00000518936 CNGB1Q14028 1251 aaPredicted RBP28.78■■■□□ 2.2
PCM1-210ENST00000518936 BLMP54132 1417 aaPredicted RBP28.77■■■□□ 2.2
PCM1-210ENST00000518936 FLT4P35916 1363 aa28.76■■■□□ 2.2
PCM1-210ENST00000518936 CFAP53Q96M91 514 aa28.76■■■□□ 2.19
PCM1-210ENST00000518936 SMG6Q86US8 1419 aaKnown RBP28.76■■■□□ 2.19
PCM1-210ENST00000518936 ADAMTS2O95450 1211 aa28.75■■■□□ 2.19
PCM1-210ENST00000518936 MAP3K19Q56UN5 1328 aa28.74■■■□□ 2.19
PCM1-210ENST00000518936 IP6K1Q92551 441 aa28.73■■■□□ 2.19
PCM1-210ENST00000518936 CDK12Q9NYV4 1490 aaPredicted RBP28.72■■■□□ 2.19
PCM1-210ENST00000518936 NWD2Q9ULI1 1742 aa28.72■■■□□ 2.19
PCM1-210ENST00000518936 ZBTB7CA1YPR0 619 aa28.72■■■□□ 2.19
PCM1-210ENST00000518936 POLKQ9UBT6 870 aa28.72■■■□□ 2.19
PCM1-210ENST00000518936 PPP2R1AP30153 589 aa28.71■■■□□ 2.19
PCM1-210ENST00000518936 RRS1Q15050 365 aaKnown RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms