RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-209	ENST00000518930	NRK	Q7Z2Y5	1582 aa		33.57	■■■□□ 2.96
PCM1-209	ENST00000518930	WASHC2A	Q641Q2	1341 aa		33.55	■■■□□ 2.96
PCM1-209	ENST00000518930	SHPRH	Q149N8	1683 aa		33.55	■■■□□ 2.96
PCM1-209	ENST00000518930	PAK3	O75914	559 aa	Predicted RBP	33.55	■■■□□ 2.96
PCM1-209	ENST00000518930	ALS2	Q96Q42	1657 aa		33.54	■■■□□ 2.96
PCM1-209	ENST00000518930	JCAD	Q9P266	1359 aa		33.53	■■■□□ 2.96
PCM1-209	ENST00000518930	SPATA31A3	Q5VYP0	1347 aa		33.53	■■■□□ 2.96
PCM1-209	ENST00000518930	ARHGEF10	O15013	1369 aa		33.51	■■■□□ 2.96
PCM1-209	ENST00000518930	LMOD2	Q6P5Q4	547 aa		33.51	■■■□□ 2.95
PCM1-209	ENST00000518930	EDC4	Q6P2E9	1401 aa	Known RBP	33.51	■■■□□ 2.95
PCM1-209	ENST00000518930	PNPLA6	Q8IY17	1366 aa		33.48	■■■□□ 2.95
PCM1-209	ENST00000518930	SSH2	Q76I76	1423 aa		33.48	■■■□□ 2.95
PCM1-209	ENST00000518930	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.48	■■■□□ 2.95
PCM1-209	ENST00000518930	TTC21A	Q8NDW8	1320 aa		33.46	■■■□□ 2.95
PCM1-209	ENST00000518930	TTC21B	Q7Z4L5	1316 aa		33.45	■■■□□ 2.95
PCM1-209	ENST00000518930	PIK3C2A	O00443	1686 aa		33.45	■■■□□ 2.94
PCM1-209	ENST00000518930	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.42	■■■□□ 2.94	2e-9	■■□□□ 14.3
PCM1-209	ENST00000518930	ABTB2	Q8N961	1025 aa		33.42	■■■□□ 2.94
PCM1-209	ENST00000518930	NSD3	Q9BZ95	1437 aa		33.42	■■■□□ 2.94
PCM1-209	ENST00000518930	PANK3	Q9H999	370 aa		33.41	■■■□□ 2.94
PCM1-209	ENST00000518930	MED1	Q15648	1581 aa	Predicted RBP	33.41	■■■□□ 2.94
PCM1-209	ENST00000518930	KIF20B	Q96Q89	1820 aa		33.39	■■■□□ 2.94
PCM1-209	ENST00000518930	SPATA31A6	Q5VVP1	1343 aa		33.38	■■■□□ 2.93
PCM1-209	ENST00000518930	ABCA3	Q99758	1704 aa		33.38	■■■□□ 2.93
PCM1-209	ENST00000518930	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.35	■■■□□ 2.93
PCM1-209	ENST00000518930	NUTM2G	Q5VZR2	741 aa		33.35	■■■□□ 2.93
PCM1-209	ENST00000518930	CARD14	Q9BXL6	1004 aa		33.35	■■■□□ 2.93
PCM1-209	ENST00000518930	CRYBG1	Q9Y4K1	1723 aa		33.35	■■■□□ 2.93
PCM1-209	ENST00000518930	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.35	■■■□□ 2.93
PCM1-209	ENST00000518930	USP54	Q70EL1	1684 aa		33.34	■■■□□ 2.93
PCM1-209	ENST00000518930	PLEKHG5	O94827	1062 aa		33.34	■■■□□ 2.93
PCM1-209	ENST00000518930	HAP1	P54257	671 aa	Predicted RBP	33.33	■■■□□ 2.93
PCM1-209	ENST00000518930	NLRP6	P59044	892 aa		33.33	■■■□□ 2.93
PCM1-209	ENST00000518930	NLRP13	Q86W25	1043 aa		33.33	■■■□□ 2.93
PCM1-209	ENST00000518930	NME9	Q86XW9	330 aa		33.32	■■■□□ 2.92
PCM1-209	ENST00000518930	MARF1	Q9Y4F3	1742 aa	Known RBP	33.31	■■■□□ 2.92
PCM1-209	ENST00000518930	CGNL1	Q0VF96	1302 aa		33.3	■■■□□ 2.92
PCM1-209	ENST00000518930	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.3	■■■□□ 2.92
PCM1-209	ENST00000518930	NUTM2E	B1AL46	878 aa	Predicted RBP	33.3	■■■□□ 2.92
PCM1-209	ENST00000518930	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.3	■■■□□ 2.92
PCM1-209	ENST00000518930	CABLES1	Q8TDN4	633 aa		33.28	■■■□□ 2.92
PCM1-209	ENST00000518930	KNSTRN	Q9Y448	316 aa		33.28	■■■□□ 2.92
PCM1-209	ENST00000518930	USP31	Q70CQ4	1352 aa		33.28	■■■□□ 2.92
PCM1-209	ENST00000518930	USP19	O94966	1318 aa		33.28	■■■□□ 2.92
PCM1-209	ENST00000518930	SLIT3	O75094	1523 aa		33.27	■■■□□ 2.92
PCM1-209	ENST00000518930	LRP6	O75581	1613 aa		33.26	■■■□□ 2.91
PCM1-209	ENST00000518930	OVOS2	A0A0J9YW53	1432 aa		33.26	■■■□□ 2.91
PCM1-209	ENST00000518930	OVOS2	Q6IE36	1432 aa		33.26	■■■□□ 2.91
PCM1-209	ENST00000518930	ANKRD26	Q9UPS8	1709 aa		33.25	■■■□□ 2.91
PCM1-209	ENST00000518930	COG3	Q96JB2	828 aa		33.24	■■■□□ 2.91
PCM1-209	ENST00000518930	FYB1	O15117	783 aa		33.23	■■■□□ 2.91
PCM1-209	ENST00000518930	ZRANB1	Q9UGI0	708 aa		33.23	■■■□□ 2.91
PCM1-209	ENST00000518930	MEX3C	Q5U5Q3	659 aa	Known RBP	33.22	■■■□□ 2.91
PCM1-209	ENST00000518930	GGNBP2	Q9H3C7	697 aa		33.22	■■■□□ 2.91
PCM1-209	ENST00000518930	NSD2	O96028	1365 aa		33.21	■■■□□ 2.91
PCM1-209	ENST00000518930	ADAMTS2	O95450	1211 aa		33.18	■■■□□ 2.9
PCM1-209	ENST00000518930	DDX10	Q13206	875 aa	Known RBP	33.18	■■■□□ 2.9
PCM1-209	ENST00000518930	KCNH5	Q8NCM2	988 aa		33.18	■■■□□ 2.9
PCM1-209	ENST00000518930	GC	P02774	474 aa		33.17	■■■□□ 2.9
PCM1-209	ENST00000518930	PER1	O15534	1290 aa	Predicted RBP	33.16	■■■□□ 2.9
PCM1-209	ENST00000518930	SOX12	O15370	315 aa		33.15	■■■□□ 2.9
PCM1-209	ENST00000518930	NFAT5	O94916	1531 aa		33.14	■■■□□ 2.9
PCM1-209	ENST00000518930	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.12	■■■□□ 2.89
PCM1-209	ENST00000518930	ZC3H6	P61129	1189 aa	Known RBP	33.11	■■■□□ 2.89
PCM1-209	ENST00000518930	COL14A1	Q05707	1796 aa	Known RBP	33.11	■■■□□ 2.89
PCM1-209	ENST00000518930	KIAA0232	Q92628	1395 aa		33.1	■■■□□ 2.89
PCM1-209	ENST00000518930	CPD	O75976	1380 aa		33.09	■■■□□ 2.89
PCM1-209	ENST00000518930	NPC1L1	Q9UHC9	1359 aa		33.09	■■■□□ 2.89
PCM1-209	ENST00000518930	LTN1	O94822	1766 aa		33.09	■■■□□ 2.89
PCM1-209	ENST00000518930	C8orf37	Q96NL8	207 aa		33.09	■■■□□ 2.89
PCM1-209	ENST00000518930	PRDM11	Q9NQV5	511 aa		33.09	■■■□□ 2.89
PCM1-209	ENST00000518930	PLCH1	Q4KWH8	1693 aa		33.08	■■■□□ 2.89
PCM1-209	ENST00000518930	ZBTB7C	A1YPR0	619 aa		33.07	■■■□□ 2.88
PCM1-209	ENST00000518930	CC2D1B	Q5T0F9	858 aa	Known RBP	33.06	■■■□□ 2.88
PCM1-209	ENST00000518930	MORC1	Q86VD1	984 aa		33.06	■■■□□ 2.88
PCM1-209	ENST00000518930	NGLY1	Q96IV0	654 aa		33.04	■■■□□ 2.88
PCM1-209	ENST00000518930	CNGB1	Q14028	1251 aa	Predicted RBP	33.03	■■■□□ 2.88
PCM1-209	ENST00000518930	NWD2	Q9ULI1	1742 aa		33.02	■■■□□ 2.88
PCM1-209	ENST00000518930	CHRNA2	Q15822	529 aa		33.01	■■■□□ 2.87
PCM1-209	ENST00000518930	ARHGEF25	Q86VW2	580 aa		33.01	■■■□□ 2.87
PCM1-209	ENST00000518930	ABCC6	O95255	1503 aa		33.01	■■■□□ 2.87
PCM1-209	ENST00000518930	FAM83G	A6ND36	823 aa		33	■■■□□ 2.87
PCM1-209	ENST00000518930	PHF23	Q9BUL5	403 aa	Predicted RBP	33	■■■□□ 2.87
PCM1-209	ENST00000518930	LMO7	Q8WWI1	1683 aa		33	■■■□□ 2.87
PCM1-209	ENST00000518930	TNNT2	P45379	298 aa	Predicted RBP	32.99	■■■□□ 2.87
PCM1-209	ENST00000518930	AFF2	P51816	1311 aa		32.98	■■■□□ 2.87
PCM1-209	ENST00000518930	SLIT2	O94813	1529 aa		32.97	■■■□□ 2.87
PCM1-209	ENST00000518930	AATK	Q6ZMQ8	1374 aa		32.97	■■■□□ 2.87
PCM1-209	ENST00000518930	MAP2	P11137	1827 aa	Known RBP	32.97	■■■□□ 2.87
PCM1-209	ENST00000518930	COL18A1	P39060	1754 aa		32.96	■■■□□ 2.87
PCM1-209	ENST00000518930	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.96	■■■□□ 2.87
PCM1-209	ENST00000518930	NRAP	Q86VF7	1730 aa		32.95	■■■□□ 2.87
PCM1-209	ENST00000518930	FBLN1	P23142	703 aa		32.95	■■■□□ 2.87
PCM1-209	ENST00000518930	RRS1	Q15050	365 aa	Known RBP	32.95	■■■□□ 2.87
PCM1-209	ENST00000518930	MAP3K19	Q56UN5	1328 aa		32.95	■■■□□ 2.86
PCM1-209	ENST00000518930	RTL1	A6NKG5	1358 aa		32.94	■■■□□ 2.86
PCM1-209	ENST00000518930	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.93	■■■□□ 2.86
PCM1-209	ENST00000518930	BTG4	Q9NY30	223 aa		32.93	■■■□□ 2.86
PCM1-209	ENST00000518930	RGPD5	Q99666	1765 aa		32.92	■■■□□ 2.86
PCM1-209	ENST00000518930	AMPH	P49418	695 aa		32.92	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms