RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 PPIP5K1Q6PFW1 1433 aa17.55■□□□□ 0.4
MRPS28-202ENST00000518271 TONSLQ96HA7 1378 aa17.55■□□□□ 0.4
MRPS28-202ENST00000518271 PLEKHG3A1L390 1219 aa17.55■□□□□ 0.4
MRPS28-202ENST00000518271 CCDC61Q9Y6R9 512 aa17.55■□□□□ 0.4
MRPS28-202ENST00000518271 NRKQ7Z2Y5 1582 aa17.54■□□□□ 0.4
MRPS28-202ENST00000518271 ACEP12821 1306 aa17.54■□□□□ 0.4
MRPS28-202ENST00000518271 NGDNQ8NEJ9 315 aaKnown RBP17.54■□□□□ 0.4
MRPS28-202ENST00000518271 BRWD3Q6RI45 1802 aa17.54■□□□□ 0.4
MRPS28-202ENST00000518271 CABP2Q9NPB3 220 aa17.53■□□□□ 0.4
MRPS28-202ENST00000518271 TRPC5Q9UL62 973 aaPredicted RBP17.53■□□□□ 0.4
MRPS28-202ENST00000518271 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
MRPS28-202ENST00000518271 LMOD2Q6P5Q4 547 aa17.52■□□□□ 0.4
MRPS28-202ENST00000518271 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
MRPS28-202ENST00000518271 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
MRPS28-202ENST00000518271 MON2Q7Z3U7 1717 aa17.51■□□□□ 0.39
MRPS28-202ENST00000518271 SRPK2P78362 688 aaKnown RBP17.5■□□□□ 0.39
MRPS28-202ENST00000518271 SSH2Q76I76 1423 aa17.49■□□□□ 0.39
MRPS28-202ENST00000518271 UNC5CLQ8IV45 518 aa17.49■□□□□ 0.39
MRPS28-202ENST00000518271 USP6P35125 1406 aa17.48■□□□□ 0.39
MRPS28-202ENST00000518271 LMO7Q8WWI1 1683 aa17.48■□□□□ 0.39
MRPS28-202ENST00000518271 FAM83GA6ND36 823 aa17.47■□□□□ 0.39
MRPS28-202ENST00000518271 PAK3O75914 559 aaPredicted RBP17.47■□□□□ 0.39
MRPS28-202ENST00000518271 UPF1Q92900 1129 aaKnown RBP eCLIP17.47■□□□□ 0.39
MRPS28-202ENST00000518271 EVC2Q86UK5 1308 aa17.47■□□□□ 0.39
MRPS28-202ENST00000518271 HAP1P54257 671 aaPredicted RBP17.46■□□□□ 0.39
MRPS28-202ENST00000518271 GJD4Q96KN9 370 aaPredicted RBP17.46■□□□□ 0.39
MRPS28-202ENST00000518271 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
MRPS28-202ENST00000518271 USP19O94966 1318 aa17.46■□□□□ 0.38
MRPS28-202ENST00000518271 CABP1Q9NZU7 370 aa17.45■□□□□ 0.38
MRPS28-202ENST00000518271 SLIT3O75094 1523 aa17.45■□□□□ 0.38
MRPS28-202ENST00000518271 USP54Q70EL1 1684 aa17.44■□□□□ 0.38
MRPS28-202ENST00000518271 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
MRPS28-202ENST00000518271 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
MRPS28-202ENST00000518271 KIAA0232Q92628 1395 aa17.43■□□□□ 0.38
MRPS28-202ENST00000518271 THSD7AQ9UPZ6 1657 aa17.43■□□□□ 0.38
MRPS28-202ENST00000518271 VPS72Q15906 364 aa17.43■□□□□ 0.38
MRPS28-202ENST00000518271 NUTM2GQ5VZR2 741 aa17.43■□□□□ 0.38
MRPS28-202ENST00000518271 CPSF1Q10570 1443 aaKnown RBP17.43■□□□□ 0.38
MRPS28-202ENST00000518271 ATAD2Q6PL18 1390 aa17.41■□□□□ 0.38
MRPS28-202ENST00000518271 COL18A1P39060 1754 aa17.41■□□□□ 0.38
MRPS28-202ENST00000518271 CAMTA1Q9Y6Y1 1673 aa17.4■□□□□ 0.38
MRPS28-202ENST00000518271 BTG4Q9NY30 223 aa17.4■□□□□ 0.38
MRPS28-202ENST00000518271 CPDO75976 1380 aa17.4■□□□□ 0.38
MRPS28-202ENST00000518271 TESK2Q96S53 571 aa17.39■□□□□ 0.37
MRPS28-202ENST00000518271 PCGF6Q9BYE7 350 aa17.39■□□□□ 0.37
MRPS28-202ENST00000518271 ABTB2Q8N961 1025 aa17.38■□□□□ 0.37
MRPS28-202ENST00000518271 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
MRPS28-202ENST00000518271 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
MRPS28-202ENST00000518271 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
MRPS28-202ENST00000518271 ONECUT3O60422 494 aaPredicted RBP17.37■□□□□ 0.37
MRPS28-202ENST00000518271 CHRNA2Q15822 529 aa17.37■□□□□ 0.37
MRPS28-202ENST00000518271 NFAT5O94916 1531 aa17.37■□□□□ 0.37
MRPS28-202ENST00000518271 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
MRPS28-202ENST00000518271 SPATA31A5Q5VU36 1347 aa17.35■□□□□ 0.37
MRPS28-202ENST00000518271 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
MRPS28-202ENST00000518271 SPATA31A7Q8IWB4 1347 aa17.35■□□□□ 0.37
MRPS28-202ENST00000518271 WNK3Q9BYP7 1800 aa17.35■□□□□ 0.37
MRPS28-202ENST00000518271 ST20-MTHFSA0A0A6YYL1 179 aa17.34■□□□□ 0.37
MRPS28-202ENST00000518271 USP47Q96K76 1375 aa17.34■□□□□ 0.37
MRPS28-202ENST00000518271 KTN1Q86UP2 1357 aaKnown RBP17.33■□□□□ 0.36
MRPS28-202ENST00000518271 GCP02774 474 aa17.33■□□□□ 0.36
MRPS28-202ENST00000518271 NLRP13Q86W25 1043 aa17.33■□□□□ 0.36
MRPS28-202ENST00000518271 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.36
MRPS28-202ENST00000518271 MYOM1P52179 1685 aa17.32■□□□□ 0.36
MRPS28-202ENST00000518271 COL5A2P05997 1499 aaPredicted RBP17.32■□□□□ 0.36
MRPS28-202ENST00000518271 LTN1O94822 1766 aa17.32■□□□□ 0.36
MRPS28-202ENST00000518271 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
MRPS28-202ENST00000518271 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
MRPS28-202ENST00000518271 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
MRPS28-202ENST00000518271 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
MRPS28-202ENST00000518271 PARP4Q9UKK3 1724 aaKnown RBP17.3■□□□□ 0.36
MRPS28-202ENST00000518271 SPATA31A1Q5TZJ5 1347 aa17.3■□□□□ 0.36
MRPS28-202ENST00000518271 NLRP6P59044 892 aa17.3■□□□□ 0.36
MRPS28-202ENST00000518271 FAM98CQ17RN3 349 aaKnown RBP17.3■□□□□ 0.36
MRPS28-202ENST00000518271 PUS7Q96PZ0 661 aaKnown RBP17.3■□□□□ 0.36
MRPS28-202ENST00000518271 TIMELESSQ9UNS1 1208 aa17.3■□□□□ 0.36
MRPS28-202ENST00000518271 SLC12A5Q9H2X9 1139 aa17.29■□□□□ 0.36
MRPS28-202ENST00000518271 TNS1Q9HBL0 1735 aaKnown RBP17.29■□□□□ 0.36
MRPS28-202ENST00000518271 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
MRPS28-202ENST00000518271 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
MRPS28-202ENST00000518271 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
MRPS28-202ENST00000518271 ABCC6O95255 1503 aa17.28■□□□□ 0.36
MRPS28-202ENST00000518271 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
MRPS28-202ENST00000518271 ZRANB1Q9UGI0 708 aa17.27■□□□□ 0.36
MRPS28-202ENST00000518271 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.35
MRPS28-202ENST00000518271 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.35
MRPS28-202ENST00000518271 RGPD1P0DJD0 1748 aa17.26■□□□□ 0.35
MRPS28-202ENST00000518271 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
MRPS28-202ENST00000518271 LRRC37A3O60309 1634 aa17.25■□□□□ 0.35
MRPS28-202ENST00000518271 SRCAPQ6ZRS2 3230 aa17.25■□□□□ 0.35
MRPS28-202ENST00000518271 BLMP54132 1417 aaPredicted RBP17.25■□□□□ 0.35
MRPS28-202ENST00000518271 LARP1Q6PKG0 1096 aaKnown RBP17.25■□□□□ 0.35
MRPS28-202ENST00000518271 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
MRPS28-202ENST00000518271 NME9Q86XW9 330 aa17.25■□□□□ 0.35
MRPS28-202ENST00000518271 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
MRPS28-202ENST00000518271 KIF20BQ96Q89 1820 aa17.24■□□□□ 0.35
MRPS28-202ENST00000518271 ARHGEF25Q86VW2 580 aa17.24■□□□□ 0.35
MRPS28-202ENST00000518271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.23■□□□□ 0.357e-7■■□□□ 13.8
MRPS28-202ENST00000518271 AXIN2Q9Y2T1 843 aa17.23■□□□□ 0.35
MRPS28-202ENST00000518271 PEAK1Q9H792 1746 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms