RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 PSDA5PKW4 1024 aaPredicted RBP10.9□□□□□ -0.66
PVT1-206ENST00000517838 KRT27Q7Z3Y8 459 aa10.9□□□□□ -0.66
PVT1-206ENST00000517838 CABLES1Q8TDN4 633 aa10.9□□□□□ -0.66
PVT1-206ENST00000517838 PLEKHH1Q9ULM0 1364 aa10.9□□□□□ -0.67
PVT1-206ENST00000517838 ADGRF5Q8IZF2 1346 aa10.89□□□□□ -0.67
PVT1-206ENST00000517838 SP7Q8TDD2 431 aaPredicted RBP10.89□□□□□ -0.67
PVT1-206ENST00000517838 CDC42BPGQ6DT37 1551 aa10.88□□□□□ -0.67
PVT1-206ENST00000517838 TMEM132EQ6IEE7 984 aa10.88□□□□□ -0.67
PVT1-206ENST00000517838 IFNLR1Q8IU57 520 aaPredicted RBP10.88□□□□□ -0.67
PVT1-206ENST00000517838 ABCC11Q96J66 1382 aa10.88□□□□□ -0.67
PVT1-206ENST00000517838 FAM83GA6ND36 823 aa10.87□□□□□ -0.67
PVT1-206ENST00000517838 CCDC9Q9Y3X0 531 aaKnown RBP10.87□□□□□ -0.67
PVT1-206ENST00000517838 TECPR2O15040 1411 aa10.86□□□□□ -0.67
PVT1-206ENST00000517838 NUBP1P53384 320 aa10.86□□□□□ -0.67
PVT1-206ENST00000517838 HAP1P54257 671 aaPredicted RBP10.86□□□□□ -0.67
PVT1-206ENST00000517838 CCDC144AA2RUR9 1427 aa10.85□□□□□ -0.67
PVT1-206ENST00000517838 BAG6P46379 1132 aa10.85□□□□□ -0.67
PVT1-206ENST00000517838 EN1Q05925 392 aaPredicted RBP10.85□□□□□ -0.67
PVT1-206ENST00000517838 PSME1Q06323 249 aa10.85□□□□□ -0.67
PVT1-206ENST00000517838 RGL3Q3MIN7 710 aa10.85□□□□□ -0.67
PVT1-206ENST00000517838 PHF8Q9UPP1 1060 aa10.85□□□□□ -0.67
PVT1-206ENST00000517838 R3HDM1Q15032 1099 aaKnown RBP10.84□□□□□ -0.67
PVT1-206ENST00000517838 FAM98CQ17RN3 349 aaKnown RBP10.84□□□□□ -0.67
PVT1-206ENST00000517838 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
PVT1-206ENST00000517838 TNS3Q68CZ2 1445 aa10.84□□□□□ -0.67
PVT1-206ENST00000517838 FAM182BQ5T319 152 aa10.83□□□□□ -0.68
PVT1-206ENST00000517838 LMOD2Q6P5Q4 547 aa10.83□□□□□ -0.68
PVT1-206ENST00000517838 SIRT1Q96EB6 747 aa10.83□□□□□ -0.68
PVT1-206ENST00000517838 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.83□□□□□ -0.68
PVT1-206ENST00000517838 LRP5O75197 1615 aa10.83□□□□□ -0.68
PVT1-206ENST00000517838 SBNO1A3KN83 1393 aa10.82□□□□□ -0.68
PVT1-206ENST00000517838 A0A0G2JS52 829 aa10.82□□□□□ -0.68
PVT1-206ENST00000517838 MYT1Q01538 1121 aa10.82□□□□□ -0.68
PVT1-206ENST00000517838 BTG4Q9NY30 223 aa10.82□□□□□ -0.68
PVT1-206ENST00000517838 USP32Q8NFA0 1604 aa10.82□□□□□ -0.68
PVT1-206ENST00000517838 RRBP1Q9P2E9 1410 aaKnown RBP10.82□□□□□ -0.68
PVT1-206ENST00000517838 PAK3O75914 559 aaPredicted RBP10.81□□□□□ -0.68
PVT1-206ENST00000517838 KLHL34Q8N239 644 aa10.81□□□□□ -0.68
PVT1-206ENST00000517838 ZNF579Q8NAF0 562 aaKnown RBP10.81□□□□□ -0.68
PVT1-206ENST00000517838 MARF1Q9Y4F3 1742 aaKnown RBP10.81□□□□□ -0.68
PVT1-206ENST00000517838 ARHGEF10O15013 1369 aa10.8□□□□□ -0.68
PVT1-206ENST00000517838 ANKRD30BQ9BXX2 1392 aa10.8□□□□□ -0.68
PVT1-206ENST00000517838 KIF1BO60333 1816 aa10.8□□□□□ -0.68
PVT1-206ENST00000517838 EZH2Q15910 746 aaKnown RBP10.8□□□□□ -0.68
PVT1-206ENST00000517838 PMFBP1Q8TBY8 1022 aa10.8□□□□□ -0.68
PVT1-206ENST00000517838 SPATA31E1Q6ZUB1 1445 aa10.8□□□□□ -0.68
PVT1-206ENST00000517838 YTHDC2Q9H6S0 1430 aaKnown RBP10.8□□□□□ -0.68
PVT1-206ENST00000517838 C14orf93Q9H972 538 aaKnown RBP10.79□□□□□ -0.68
PVT1-206ENST00000517838 BRWD3Q6RI45 1802 aa10.79□□□□□ -0.68
PVT1-206ENST00000517838 PIK3C2GO75747 1445 aa10.78□□□□□ -0.68
PVT1-206ENST00000517838 SAFB2Q14151 953 aaKnown RBP eCLIP10.78□□□□□ -0.68
PVT1-206ENST00000517838 PRAM1Q96QH2 718 aa10.78□□□□□ -0.68
PVT1-206ENST00000517838 CAMKK2Q96RR4 588 aa10.78□□□□□ -0.68
PVT1-206ENST00000517838 NRXN1Q9ULB1 1477 aa10.78□□□□□ -0.68
PVT1-206ENST00000517838 SPATA31A5Q5VU36 1347 aa10.78□□□□□ -0.68
PVT1-206ENST00000517838 SPATA31A7Q8IWB4 1347 aa10.78□□□□□ -0.68
PVT1-206ENST00000517838 CFAP70Q5T0N1 1121 aa10.77□□□□□ -0.69
PVT1-206ENST00000517838 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
PVT1-206ENST00000517838 CCDC61Q9Y6R9 512 aa10.77□□□□□ -0.69
PVT1-206ENST00000517838 PPLO60437 1756 aa10.77□□□□□ -0.69
PVT1-206ENST00000517838 DISP2A7MBM2 1401 aa10.76□□□□□ -0.69
PVT1-206ENST00000517838 KIF1AQ12756 1690 aa10.76□□□□□ -0.69
PVT1-206ENST00000517838 FMN2Q9NZ56 1722 aa10.75□□□□□ -0.69
PVT1-206ENST00000517838 TRIM37O94972 964 aa10.75□□□□□ -0.69
PVT1-206ENST00000517838 MPHOSPH9Q99550 1183 aa10.75□□□□□ -0.69
PVT1-206ENST00000517838 DHX57Q6P158 1386 aaKnown RBP10.75□□□□□ -0.69
PVT1-206ENST00000517838 YY1P25490 414 aa10.74□□□□□ -0.69
PVT1-206ENST00000517838 SPOCK2Q92563 424 aa10.74□□□□□ -0.69
PVT1-206ENST00000517838 PLCH1Q4KWH8 1693 aa10.73□□□□□ -0.69
PVT1-206ENST00000517838 NWD2Q9ULI1 1742 aa10.73□□□□□ -0.69
PVT1-206ENST00000517838 GABBR2O75899 941 aa10.73□□□□□ -0.69
PVT1-206ENST00000517838 APBA3O96018 575 aa10.73□□□□□ -0.69
PVT1-206ENST00000517838 FAM196AQ6ZSG2 479 aa10.73□□□□□ -0.69
PVT1-206ENST00000517838 FAM212AQ96EL1 285 aa10.73□□□□□ -0.69
PVT1-206ENST00000517838 PHF12Q96QT6 1004 aa10.73□□□□□ -0.69
PVT1-206ENST00000517838 HIRIP3Q9BW71 556 aaPredicted RBP10.73□□□□□ -0.69
PVT1-206ENST00000517838 POGKQ9P215 609 aa10.73□□□□□ -0.69
PVT1-206ENST00000517838 PRR36Q9H6K5 1346 aa10.73□□□□□ -0.69
PVT1-206ENST00000517838 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
PVT1-206ENST00000517838 CLCN6P51797 869 aa10.72□□□□□ -0.69
PVT1-206ENST00000517838 PRDM11Q9NQV5 511 aa10.72□□□□□ -0.69
PVT1-206ENST00000517838 SPATA31A1Q5TZJ5 1347 aa10.72□□□□□ -0.69
PVT1-206ENST00000517838 GPRASP1Q5JY77 1395 aa10.72□□□□□ -0.69
PVT1-206ENST00000517838 ANKARQ7Z5J8 1434 aa10.72□□□□□ -0.69
PVT1-206ENST00000517838 CHRNA2Q15822 529 aa10.71□□□□□ -0.69
PVT1-206ENST00000517838 KNDC1Q76NI1 1749 aa10.7□□□□□ -0.7
PVT1-206ENST00000517838 STRN4Q9NRL3 753 aa10.7□□□□□ -0.7
PVT1-206ENST00000517838 TRAK1Q9UPV9 953 aa10.7□□□□□ -0.7
PVT1-206ENST00000517838 PARD3Q8TEW0 1356 aa10.69□□□□□ -0.7
PVT1-206ENST00000517838 KIAA0232Q92628 1395 aa10.69□□□□□ -0.7
PVT1-206ENST00000517838 MINK1Q8N4C8 1332 aaPredicted RBP10.69□□□□□ -0.7
PVT1-206ENST00000517838 WASLO00401 505 aaPredicted RBP10.69□□□□□ -0.7
PVT1-206ENST00000517838 ZC3H6P61129 1189 aaKnown RBP10.69□□□□□ -0.7
PVT1-206ENST00000517838 NGDNQ8NEJ9 315 aaKnown RBP10.69□□□□□ -0.7
PVT1-206ENST00000517838 NRAPQ86VF7 1730 aa10.69□□□□□ -0.7
PVT1-206ENST00000517838 ABCA3Q99758 1704 aa10.68□□□□□ -0.7
PVT1-206ENST00000517838 BARGINQ6ZT62 677 aa10.68□□□□□ -0.7
PVT1-206ENST00000517838 USP35Q9P2H5 1018 aa10.68□□□□□ -0.7
PVT1-206ENST00000517838 THSD7AQ9UPZ6 1657 aa10.68□□□□□ -0.7
PVT1-206ENST00000517838 PDE3BQ13370 1112 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms