RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 MON2Q7Z3U7 1717 aa34.84■■■■□ 3.17
COL13A1-210ENST00000517713 DNAJC5Q9H3Z4 198 aa34.84■■■■□ 3.17
COL13A1-210ENST00000517713 AKAP12Q02952 1782 aa34.83■■■■□ 3.17
COL13A1-210ENST00000517713 ITSN1Q15811 1721 aa34.83■■■■□ 3.17
COL13A1-210ENST00000517713 CCDC136Q96JN2 1154 aa34.81■■■■□ 3.16
COL13A1-210ENST00000517713 ZNF692Q9BU19 519 aaPredicted RBP34.81■■■■□ 3.16
COL13A1-210ENST00000517713 PTCH1Q13635 1447 aa34.81■■■■□ 3.16
COL13A1-210ENST00000517713 PNPLA6Q8IY17 1366 aa34.81■■■■□ 3.16
COL13A1-210ENST00000517713 ADAMTSL3P82987 1691 aa34.8■■■■□ 3.16
COL13A1-210ENST00000517713 DMRT2Q9Y5R5 561 aa34.79■■■■□ 3.16
COL13A1-210ENST00000517713 NKTRP30414 1462 aaKnown RBP34.79■■■■□ 3.16
COL13A1-210ENST00000517713 NEUROD2Q15784 382 aa34.79■■■■□ 3.16
COL13A1-210ENST00000517713 RRP7AQ9Y3A4 280 aaKnown RBP34.79■■■■□ 3.16
COL13A1-210ENST00000517713 EXOC6Q8TAG9 804 aa34.78■■■■□ 3.16
COL13A1-210ENST00000517713 U2SURPO15042 1029 aaKnown RBP34.77■■■■□ 3.16
COL13A1-210ENST00000517713 PLIN1O60240 522 aa34.77■■■■□ 3.16
COL13A1-210ENST00000517713 NME9Q86XW9 330 aa34.77■■■■□ 3.16
COL13A1-210ENST00000517713 TOPAZ1Q8N9V7 1692 aa34.77■■■■□ 3.16
COL13A1-210ENST00000517713 NCBP3Q53F19 620 aaKnown RBP34.77■■■■□ 3.16
COL13A1-210ENST00000517713 DIAPH1O60610 1272 aaKnown RBP34.76■■■■□ 3.16
COL13A1-210ENST00000517713 PHF23Q9BUL5 403 aaPredicted RBP34.76■■■■□ 3.16
COL13A1-210ENST00000517713 CCDC27Q2M243 656 aa34.75■■■■□ 3.15
COL13A1-210ENST00000517713 POLKQ9UBT6 870 aa34.75■■■■□ 3.15
COL13A1-210ENST00000517713 XRN1Q8IZH2 1706 aaKnown RBP34.73■■■■□ 3.15
COL13A1-210ENST00000517713 PLEKHG3A1L390 1219 aa34.72■■■■□ 3.15
COL13A1-210ENST00000517713 ZNF142P52746 1687 aaPredicted RBP34.71■■■■□ 3.15
COL13A1-210ENST00000517713 WDR63Q8IWG1 891 aa34.71■■■■□ 3.15
COL13A1-210ENST00000517713 MAP2P11137 1827 aaKnown RBP34.71■■■■□ 3.15
COL13A1-210ENST00000517713 COG3Q96JB2 828 aa34.71■■■■□ 3.15
COL13A1-210ENST00000517713 PLEKHF1Q96S99 279 aa34.71■■■■□ 3.15
COL13A1-210ENST00000517713 ZRANB1Q9UGI0 708 aa34.71■■■■□ 3.15
COL13A1-210ENST00000517713 FBLN1P23142 703 aa34.7■■■■□ 3.15
COL13A1-210ENST00000517713 NUTM2FA1L443 756 aa34.69■■■■□ 3.14
COL13A1-210ENST00000517713 PIK3R4Q99570 1358 aa34.69■■■■□ 3.14
COL13A1-210ENST00000517713 ACEP12821 1306 aa34.69■■■■□ 3.14
COL13A1-210ENST00000517713 AATKQ6ZMQ8 1374 aa34.68■■■■□ 3.14
COL13A1-210ENST00000517713 PPM1GO15355 546 aaPredicted RBP34.67■■■■□ 3.14
COL13A1-210ENST00000517713 ANKLE2Q86XL3 938 aa34.67■■■■□ 3.14
COL13A1-210ENST00000517713 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.65■■■■□ 3.14
COL13A1-210ENST00000517713 NRKQ7Z2Y5 1582 aa34.65■■■■□ 3.14
COL13A1-210ENST00000517713 PNNQ9H307 717 aaKnown RBP34.65■■■■□ 3.14
COL13A1-210ENST00000517713 TTC21BQ7Z4L5 1316 aa34.63■■■■□ 3.13
COL13A1-210ENST00000517713 MAPK8IP3Q9UPT6 1336 aa34.63■■■■□ 3.13
COL13A1-210ENST00000517713 KCNA6P17658 529 aa34.62■■■■□ 3.13
COL13A1-210ENST00000517713 CRBNQ96SW2 442 aa34.62■■■■□ 3.13
COL13A1-210ENST00000517713 EMILIN1Q9Y6C2 1016 aa34.62■■■■□ 3.13
COL13A1-210ENST00000517713 USP6P35125 1406 aa34.61■■■■□ 3.13
COL13A1-210ENST00000517713 CDK12Q9NYV4 1490 aaPredicted RBP34.6■■■■□ 3.13
COL13A1-210ENST00000517713 TMPOP42166 694 aaKnown RBP34.6■■■■□ 3.13
COL13A1-210ENST00000517713 C20orf194Q5TEA3 1177 aa34.6■■■■□ 3.13
COL13A1-210ENST00000517713 SETD1BQ9UPS6 1966 aaKnown RBP34.59■■■■□ 3.13
COL13A1-210ENST00000517713 FCHSD2O94868 740 aa34.59■■■■□ 3.13
COL13A1-210ENST00000517713 BCAR3O75815 825 aa34.54■■■■□ 3.12
COL13A1-210ENST00000517713 MYH16Q9H6N6 1097 aa34.54■■■■□ 3.12
COL13A1-210ENST00000517713 RRS1Q15050 365 aaKnown RBP34.53■■■■□ 3.12
COL13A1-210ENST00000517713 LRRC7Q96NW7 1537 aa34.53■■■■□ 3.12
COL13A1-210ENST00000517713 RGPD8O14715 1765 aaPredicted RBP34.53■■■■□ 3.12
COL13A1-210ENST00000517713 CHD2O14647 1828 aaKnown RBP34.53■■■■□ 3.12
COL13A1-210ENST00000517713 IL13P35225 146 aa34.52■■■■□ 3.12
COL13A1-210ENST00000517713 PMFBP1Q8TBY8 1022 aa34.52■■■■□ 3.12
COL13A1-210ENST00000517713 RSPH6AQ9H0K4 717 aa34.52■■■■□ 3.12
COL13A1-210ENST00000517713 SSH2Q76I76 1423 aa34.52■■■■□ 3.12
COL13A1-210ENST00000517713 TRIM35Q9UPQ4 493 aa34.52■■■■□ 3.12
COL13A1-210ENST00000517713 RBM19Q9Y4C8 960 aaKnown RBP34.52■■■■□ 3.12
COL13A1-210ENST00000517713 OVOS2A0A0J9YW53 1432 aa34.51■■■■□ 3.12
COL13A1-210ENST00000517713 OVOS2Q6IE36 1432 aa34.51■■■■□ 3.12
COL13A1-210ENST00000517713 ANKARQ7Z5J8 1434 aa34.5■■■■□ 3.11
COL13A1-210ENST00000517713 RIPK4P57078 832 aa34.48■■■■□ 3.11
COL13A1-210ENST00000517713 TTC21AQ8NDW8 1320 aa34.48■■■■□ 3.11
COL13A1-210ENST00000517713 PRKAR2BP31323 418 aa34.48■■■■□ 3.11
COL13A1-210ENST00000517713 NGDNQ8NEJ9 315 aaKnown RBP34.48■■■■□ 3.11
COL13A1-210ENST00000517713 NEFMP07197 916 aa34.47■■■■□ 3.11
COL13A1-210ENST00000517713 FMN2Q9NZ56 1722 aa34.47■■■■□ 3.11
COL13A1-210ENST00000517713 NALCNQ8IZF0 1738 aa34.45■■■■□ 3.11
COL13A1-210ENST00000517713 HMOX1P09601 288 aa34.44■■■■□ 3.1
COL13A1-210ENST00000517713 IL16Q14005 1332 aa34.43■■■■□ 3.1
COL13A1-210ENST00000517713 USP31Q70CQ4 1352 aa34.43■■■■□ 3.1
COL13A1-210ENST00000517713 RARSP54136 660 aaKnown RBP34.42■■■■□ 3.1
COL13A1-210ENST00000517713 NPHP4O75161 1426 aaPredicted RBP34.4■■■■□ 3.1
COL13A1-210ENST00000517713 FANCIQ9NVI1 1328 aa34.39■■■■□ 3.1
COL13A1-210ENST00000517713 PHACTR3Q96KR7 559 aa34.37■■■■□ 3.09
COL13A1-210ENST00000517713 PDE3AQ14432 1141 aa34.37■■■■□ 3.09
COL13A1-210ENST00000517713 NFE2L2Q16236 605 aa34.37■■■■□ 3.09
COL13A1-210ENST00000517713 TSR2Q969E8 191 aaKnown RBP34.36■■■■□ 3.09
COL13A1-210ENST00000517713 CT47B1P0C2W7 299 aaPredicted RBP34.35■■■■□ 3.09
COL13A1-210ENST00000517713 CANXP27824 592 aaKnown RBP34.35■■■■□ 3.09
COL13A1-210ENST00000517713 EIF4A2Q14240 407 aaKnown RBP34.32■■■■□ 3.08
COL13A1-210ENST00000517713 PEAK1Q9H792 1746 aa34.32■■■■□ 3.08
COL13A1-210ENST00000517713 PIK3C2AO00443 1686 aa34.32■■■■□ 3.08
COL13A1-210ENST00000517713 EXOSC9Q06265 439 aaKnown RBP34.3■■■■□ 3.08
COL13A1-210ENST00000517713 FRAT1Q92837 279 aaPredicted RBP34.3■■■■□ 3.08
COL13A1-210ENST00000517713 RBM33Q96EV2 1170 aaKnown RBP34.29■■■■□ 3.08
COL13A1-210ENST00000517713 SOX12O15370 315 aa34.28■■■■□ 3.08
COL13A1-210ENST00000517713 ADGRL3Q9HAR2 1447 aa34.28■■■■□ 3.08
COL13A1-210ENST00000517713 HSP90AB2PQ58FF8 381 aa34.26■■■■□ 3.07
COL13A1-210ENST00000517713 BCL2L13Q9BXK5 485 aa34.25■■■■□ 3.07
COL13A1-210ENST00000517713 MAP3K19Q56UN5 1328 aa34.25■■■■□ 3.07
COL13A1-210ENST00000517713 PHF8Q9UPP1 1060 aa34.25■■■■□ 3.07
COL13A1-210ENST00000517713 CALD1Q05682 793 aaKnown RBP34.24■■■■□ 3.07
COL13A1-210ENST00000517713 NLRP6P59044 892 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms