RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 USP17L1Q7RTZ2 530 aa6.24□□□□□ -1.41
RNU6-27P-201ENST00000516146 PLEKHM2Q8IWE5 1019 aa6.24□□□□□ -1.41
RNU6-27P-201ENST00000516146 MRPL50Q8N5N7 158 aaKnown RBP6.24□□□□□ -1.41
RNU6-27P-201ENST00000516146 MYT1LQ9UL68 1186 aa6.24□□□□□ -1.41
RNU6-27P-201ENST00000516146 AXIN2Q9Y2T1 843 aa6.24□□□□□ -1.41
RNU6-27P-201ENST00000516146 USP17L5A8MUK1 530 aa6.23□□□□□ -1.41
RNU6-27P-201ENST00000516146 TK2O00142 265 aa6.23□□□□□ -1.41
RNU6-27P-201ENST00000516146 FMNL1O95466 1100 aaPredicted RBP6.23□□□□□ -1.41
RNU6-27P-201ENST00000516146 PTPRNQ16849 979 aa6.23□□□□□ -1.41
RNU6-27P-201ENST00000516146 KANK4Q5T7N3 995 aaPredicted RBP6.23□□□□□ -1.41
RNU6-27P-201ENST00000516146 POTEEQ6S8J3 1075 aa6.23□□□□□ -1.41
RNU6-27P-201ENST00000516146 ARMC2Q8NEN0 867 aa6.23□□□□□ -1.41
RNU6-27P-201ENST00000516146 NOVA2Q9UNW9 492 aaKnown RBP6.23□□□□□ -1.41
RNU6-27P-201ENST00000516146 FAM196BA6NMK8 535 aa6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 BHMG1C9JSJ3 638 aaPredicted RBP6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 NR1I2O75469 434 aa6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 F12P00748 615 aaPredicted RBP6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 JUNDP17535 347 aa6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 SLFNL1Q499Z3 407 aa6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 LARP1Q6PKG0 1096 aaKnown RBP6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 BLOC1S3Q6QNY0 202 aa6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 RNF19BQ6ZMZ0 732 aa6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 GPKOWQ92917 476 aaPredicted RBP eCLIP6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 GPSM3Q9Y4H4 160 aa6.22□□□□□ -1.41
RNU6-27P-201ENST00000516146 ATP5J2-PTCD1G3V325 749 aa6.21□□□□□ -1.42
RNU6-27P-201ENST00000516146 PIK3CDO00329 1044 aa6.21□□□□□ -1.42
RNU6-27P-201ENST00000516146 LZTS3O60299 673 aaPredicted RBP6.21□□□□□ -1.42
RNU6-27P-201ENST00000516146 CTHP32929 405 aa6.21□□□□□ -1.42
RNU6-27P-201ENST00000516146 PTK2Q05397 1052 aa6.21□□□□□ -1.42
RNU6-27P-201ENST00000516146 TMEM164Q5U3C3 297 aa6.21□□□□□ -1.42
RNU6-27P-201ENST00000516146 BRICD5Q6PL45 260 aa6.21□□□□□ -1.42
RNU6-27P-201ENST00000516146 ZMIZ1Q9ULJ6 1067 aa6.21□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L15C9J2P7 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L10C9JJH3 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L13C9JLJ4 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L12C9JPN9 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L11C9JVI0 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L21D6R901 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L18D6R9N7 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L22D6RA61 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L17D6RBQ6 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L19D6RCP7 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L20D6RJB6 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 PPP4CP60510 307 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 USP17L24Q0WX57 530 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 NBPF14Q5TI25 921 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 ZNF687Q8N1G0 1237 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 ANKK1Q8NFD2 765 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 STK32AQ8WU08 396 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 STAC3Q96MF2 364 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 MAP10Q9P2G4 905 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 MKRN1Q9UHC7 482 aaKnown RBP6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 PCDHB3Q9Y5E6 796 aa6.2□□□□□ -1.42
RNU6-27P-201ENST00000516146 GOLGA8CPA6NN73 597 aa6.19□□□□□ -1.42
RNU6-27P-201ENST00000516146 CCNYL3P0C7X3 344 aa6.19□□□□□ -1.42
RNU6-27P-201ENST00000516146 ARID4AP29374 1257 aaPredicted RBP6.19□□□□□ -1.42
RNU6-27P-201ENST00000516146 EMP3P54852 163 aa6.19□□□□□ -1.42
RNU6-27P-201ENST00000516146 PDXDC2PQ6P474 469 aa6.19□□□□□ -1.42
RNU6-27P-201ENST00000516146 RNF135Q8IUD6 432 aa6.19□□□□□ -1.42
RNU6-27P-201ENST00000516146 SCUBE3Q8IX30 993 aa6.19□□□□□ -1.42
RNU6-27P-201ENST00000516146 FAM200AQ8TCP9 573 aa6.19□□□□□ -1.42
RNU6-27P-201ENST00000516146 ZNF428Q96B54 188 aa6.19□□□□□ -1.42
RNU6-27P-201ENST00000516146 RASA1P20936 1047 aa6.18□□□□□ -1.42
RNU6-27P-201ENST00000516146 DEPDC4Q8N2C3 294 aa6.18□□□□□ -1.42
RNU6-27P-201ENST00000516146 FAM174AQ8TBP5 190 aa6.18□□□□□ -1.42
RNU6-27P-201ENST00000516146 CDCA7Q9BWT1 371 aaPredicted RBP6.18□□□□□ -1.42
RNU6-27P-201ENST00000516146 CEP126Q9P2H0 1117 aa6.18□□□□□ -1.42
RNU6-27P-201ENST00000516146 PCDHB9Q9Y5E1 797 aa6.18□□□□□ -1.42
RNU6-27P-201ENST00000516146 ERCC3P19447 782 aa6.17□□□□□ -1.42
RNU6-27P-201ENST00000516146 NCOA4Q13772 614 aa6.17□□□□□ -1.42
RNU6-27P-201ENST00000516146 EML3Q32P44 896 aa6.17□□□□□ -1.42
RNU6-27P-201ENST00000516146 MAP7D1Q3KQU3 841 aa6.17□□□□□ -1.42
RNU6-27P-201ENST00000516146 MSS51Q4VC12 460 aa6.17□□□□□ -1.42
RNU6-27P-201ENST00000516146 TXNDC2Q86VQ3 553 aa6.17□□□□□ -1.42
RNU6-27P-201ENST00000516146 TRIM50Q86XT4 487 aa6.17□□□□□ -1.42
RNU6-27P-201ENST00000516146 PLPP7Q8NBV4 271 aa6.17□□□□□ -1.42
RNU6-27P-201ENST00000516146 THAP11Q96EK4 314 aa6.17□□□□□ -1.42
RNU6-27P-201ENST00000516146 HPS5Q9UPZ3 1129 aa6.17□□□□□ -1.42
RNU6-27P-201ENST00000516146 SOWAHBA6NEL2 793 aa6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 SSFA2P28290 1259 aa6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 ATP1A2P50993 1020 aa6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 PTK7Q13308 1070 aa6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 CRTC2Q53ET0 693 aaPredicted RBP6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 ADGRD1Q6QNK2 874 aa6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 ANKMY2Q8IV38 441 aa6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 CLP1Q92989 425 aaKnown RBP6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 NUDT12Q9BQG2 462 aa6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 EVA1BQ9NVM1 165 aa6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 TSR3Q9UJK0 312 aaKnown RBP6.16□□□□□ -1.42
RNU6-27P-201ENST00000516146 DXOO77932 396 aaKnown RBP6.15□□□□□ -1.42
RNU6-27P-201ENST00000516146 APLP1P51693 650 aa6.15□□□□□ -1.42
RNU6-27P-201ENST00000516146 KCNH2Q12809 1159 aa6.15□□□□□ -1.42
RNU6-27P-201ENST00000516146 SWI5Q1ZZU3 235 aa6.15□□□□□ -1.42
RNU6-27P-201ENST00000516146 ARHGAP9Q9BRR9 750 aa6.15□□□□□ -1.42
RNU6-27P-201ENST00000516146 RBM19Q9Y4C8 960 aaKnown RBP6.15□□□□□ -1.42
RNU6-27P-201ENST00000516146 ATP2B4P23634 1241 aa6.14□□□□□ -1.43
RNU6-27P-201ENST00000516146 ZBTB33Q86T24 672 aa6.14□□□□□ -1.43
RNU6-27P-201ENST00000516146 SPSB2Q99619 263 aa6.14□□□□□ -1.43
RNU6-27P-201ENST00000516146 NOD1Q9Y239 953 aa6.14□□□□□ -1.43
RNU6-27P-201ENST00000516146 FAM205CA6NFA0 338 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms