RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 LMO7Q8WWI1 1683 aa17.3■□□□□ 0.36
SDHA-219ENST00000515815 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
SDHA-219ENST00000515815 NEUROD1Q13562 356 aa17.3■□□□□ 0.36
SDHA-219ENST00000515815 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
SDHA-219ENST00000515815 LMOD2Q6P5Q4 547 aa17.3■□□□□ 0.36
SDHA-219ENST00000515815 FNBP4Q8N3X1 1017 aaPredicted RBP17.29■□□□□ 0.36
SDHA-219ENST00000515815 NGDNQ8NEJ9 315 aaKnown RBP17.28■□□□□ 0.36
SDHA-219ENST00000515815 QTRT2Q9H974 415 aaKnown RBP17.28■□□□□ 0.36
SDHA-219ENST00000515815 THSD7AQ9UPZ6 1657 aa17.28■□□□□ 0.36
SDHA-219ENST00000515815 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.36
SDHA-219ENST00000515815 LTN1O94822 1766 aa17.27■□□□□ 0.35
SDHA-219ENST00000515815 ATAD2Q6PL18 1390 aa17.27■□□□□ 0.35
SDHA-219ENST00000515815 PLEKHG5O94827 1062 aa17.26■□□□□ 0.35
SDHA-219ENST00000515815 NUDT16Q96DE0 195 aaKnown RBP17.26■□□□□ 0.35
SDHA-219ENST00000515815 CDK19Q9BWU1 502 aa17.25■□□□□ 0.35
SDHA-219ENST00000515815 RGPD5Q99666 1765 aa17.25■□□□□ 0.35
SDHA-219ENST00000515815 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
SDHA-219ENST00000515815 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
SDHA-219ENST00000515815 SLIT3O75094 1523 aa17.24■□□□□ 0.35
SDHA-219ENST00000515815 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
SDHA-219ENST00000515815 TNS1Q9HBL0 1735 aaKnown RBP17.23■□□□□ 0.35
SDHA-219ENST00000515815 SBNO2Q9Y2G9 1366 aa17.23■□□□□ 0.35
SDHA-219ENST00000515815 USP6P35125 1406 aa17.22■□□□□ 0.35
SDHA-219ENST00000515815 UNC5CLQ8IV45 518 aa17.21■□□□□ 0.35
SDHA-219ENST00000515815 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
SDHA-219ENST00000515815 KIF20BQ96Q89 1820 aa17.21■□□□□ 0.35
SDHA-219ENST00000515815 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
SDHA-219ENST00000515815 ACEP12821 1306 aa17.21■□□□□ 0.34
SDHA-219ENST00000515815 EVC2Q86UK5 1308 aa17.21■□□□□ 0.34
SDHA-219ENST00000515815 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
SDHA-219ENST00000515815 MYOM1P52179 1685 aa17.18■□□□□ 0.34
SDHA-219ENST00000515815 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
SDHA-219ENST00000515815 GJD4Q96KN9 370 aaPredicted RBP17.18■□□□□ 0.34
SDHA-219ENST00000515815 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
SDHA-219ENST00000515815 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
SDHA-219ENST00000515815 COL18A1P39060 1754 aa17.17■□□□□ 0.34
SDHA-219ENST00000515815 FAM208AQ9UK61 1670 aaKnown RBP17.16■□□□□ 0.34
SDHA-219ENST00000515815 KIAA0232Q92628 1395 aa17.16■□□□□ 0.34
SDHA-219ENST00000515815 PLEKHG3A1L390 1219 aa17.16■□□□□ 0.34
SDHA-219ENST00000515815 NBPF8Q3BBV2 869 aa17.16■□□□□ 0.34
SDHA-219ENST00000515815 ABCC6O95255 1503 aa17.16■□□□□ 0.34
SDHA-219ENST00000515815 EP400Q96L91 3159 aa17.16■□□□□ 0.34
SDHA-219ENST00000515815 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
SDHA-219ENST00000515815 USP19O94966 1318 aa17.15■□□□□ 0.34
SDHA-219ENST00000515815 VPS72Q15906 364 aa17.14■□□□□ 0.33
SDHA-219ENST00000515815 CARD11Q9BXL7 1154 aa17.14■□□□□ 0.33
SDHA-219ENST00000515815 PRDM11Q9NQV5 511 aa17.14■□□□□ 0.33
SDHA-219ENST00000515815 NFAT5O94916 1531 aa17.13■□□□□ 0.33
SDHA-219ENST00000515815 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
SDHA-219ENST00000515815 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
SDHA-219ENST00000515815 CPDO75976 1380 aa17.12■□□□□ 0.33
SDHA-219ENST00000515815 SSH2Q76I76 1423 aa17.12■□□□□ 0.33
SDHA-219ENST00000515815 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
SDHA-219ENST00000515815 NUTM2GQ5VZR2 741 aa17.11■□□□□ 0.33
SDHA-219ENST00000515815 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
SDHA-219ENST00000515815 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
SDHA-219ENST00000515815 CPSF1Q10570 1443 aaKnown RBP17.1■□□□□ 0.33
SDHA-219ENST00000515815 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
SDHA-219ENST00000515815 A0A0G2JS52 829 aa17.09■□□□□ 0.33
SDHA-219ENST00000515815 MYT1Q01538 1121 aa17.09■□□□□ 0.33
SDHA-219ENST00000515815 CD163L1Q9NR16 1453 aa17.09■□□□□ 0.33
SDHA-219ENST00000515815 RREB1Q92766 1687 aa17.08■□□□□ 0.32
SDHA-219ENST00000515815 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.32
SDHA-219ENST00000515815 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
SDHA-219ENST00000515815 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
SDHA-219ENST00000515815 KTN1Q86UP2 1357 aaKnown RBP17.07■□□□□ 0.32
SDHA-219ENST00000515815 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
SDHA-219ENST00000515815 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
SDHA-219ENST00000515815 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
SDHA-219ENST00000515815 PEAK1Q9H792 1746 aa17.05■□□□□ 0.32
SDHA-219ENST00000515815 SPATA31A5Q5VU36 1347 aa17.05■□□□□ 0.32
SDHA-219ENST00000515815 SPATA31A7Q8IWB4 1347 aa17.05■□□□□ 0.32
SDHA-219ENST00000515815 TTC21AQ8NDW8 1320 aa17.05■□□□□ 0.32
SDHA-219ENST00000515815 ZC3H6P61129 1189 aaKnown RBP17.05■□□□□ 0.32
SDHA-219ENST00000515815 CHRNA2Q15822 529 aa17.05■□□□□ 0.32
SDHA-219ENST00000515815 SEPT12Q8IYM1 358 aa17.05■□□□□ 0.32
SDHA-219ENST00000515815 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
SDHA-219ENST00000515815 NUP188Q5SRE5 1749 aa17.04■□□□□ 0.32
SDHA-219ENST00000515815 USP47Q96K76 1375 aa17.04■□□□□ 0.32
SDHA-219ENST00000515815 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
SDHA-219ENST00000515815 CLSPNQ9HAW4 1339 aa17.03■□□□□ 0.32
SDHA-219ENST00000515815 FAM98CQ17RN3 349 aaKnown RBP17.03■□□□□ 0.32
SDHA-219ENST00000515815 STRN4Q9NRL3 753 aa17.03■□□□□ 0.32
SDHA-219ENST00000515815 A0A1W2PP64 1363 aa17.02■□□□□ 0.32
SDHA-219ENST00000515815 CRB1P82279 1406 aa17.02■□□□□ 0.31
SDHA-219ENST00000515815 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
SDHA-219ENST00000515815 NLRP6P59044 892 aa17.01■□□□□ 0.31
SDHA-219ENST00000515815 KRT27Q7Z3Y8 459 aa17.01■□□□□ 0.31
SDHA-219ENST00000515815 RGPD2P0DJD1 1756 aa17.01■□□□□ 0.31
SDHA-219ENST00000515815 TTC21BQ7Z4L5 1316 aa17■□□□□ 0.31
SDHA-219ENST00000515815 OVOS2A0A0J9YW53 1432 aa17■□□□□ 0.31
SDHA-219ENST00000515815 OVOS2Q6IE36 1432 aa17■□□□□ 0.31
SDHA-219ENST00000515815 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
SDHA-219ENST00000515815 ZBTB7CA1YPR0 619 aa16.99■□□□□ 0.31
SDHA-219ENST00000515815 GCP02774 474 aa16.99■□□□□ 0.31
SDHA-219ENST00000515815 CCDC125Q86Z20 511 aa16.99■□□□□ 0.31
SDHA-219ENST00000515815 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
SDHA-219ENST00000515815 ONECUT3O60422 494 aaPredicted RBP16.98■□□□□ 0.31
SDHA-219ENST00000515815 LRP5O75197 1615 aa16.98■□□□□ 0.31
SDHA-219ENST00000515815 HDGFL2Q7Z4V5 671 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms