RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 PLEKHG3A1L390 1219 aa13.71□□□□□ -0.21
RACK1-234ENST00000515417 TESK2Q96S53 571 aa13.71□□□□□ -0.21
RACK1-234ENST00000515417 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.22
RACK1-234ENST00000515417 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
RACK1-234ENST00000515417 NUTM2GQ5VZR2 741 aa13.7□□□□□ -0.22
RACK1-234ENST00000515417 FNBP4Q8N3X1 1017 aaPredicted RBP13.7□□□□□ -0.22
RACK1-234ENST00000515417 POLR3AO14802 1390 aaPredicted RBP13.7□□□□□ -0.22
RACK1-234ENST00000515417 TRPC5Q9UL62 973 aaPredicted RBP13.69□□□□□ -0.22
RACK1-234ENST00000515417 ATRNO75882 1429 aa13.69□□□□□ -0.22
RACK1-234ENST00000515417 TRPM3Q9HCF6 1732 aaPredicted RBP13.69□□□□□ -0.22
RACK1-234ENST00000515417 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
RACK1-234ENST00000515417 BCL9LQ86UU0 1499 aa13.68□□□□□ -0.22
RACK1-234ENST00000515417 ARHGEF10O15013 1369 aa13.68□□□□□ -0.22
RACK1-234ENST00000515417 ATAD2Q6PL18 1390 aa13.68□□□□□ -0.22
RACK1-234ENST00000515417 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
RACK1-234ENST00000515417 TMC1Q8TDI8 760 aa13.66□□□□□ -0.22
RACK1-234ENST00000515417 DEFB132Q7Z7B7 95 aa13.65□□□□□ -0.22
RACK1-234ENST00000515417 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
RACK1-234ENST00000515417 ALS2Q96Q42 1657 aa13.65□□□□□ -0.22
RACK1-234ENST00000515417 USP6P35125 1406 aa13.64□□□□□ -0.23
RACK1-234ENST00000515417 SLC12A5Q9H2X9 1139 aa13.64□□□□□ -0.23
RACK1-234ENST00000515417 HSPA5P11021 654 aaKnown RBP13.63□□□□□ -0.23
RACK1-234ENST00000515417 GJD4Q96KN9 370 aaPredicted RBP13.63□□□□□ -0.23
RACK1-234ENST00000515417 ABTB2Q8N961 1025 aa13.62□□□□□ -0.23
RACK1-234ENST00000515417 ABCA3Q99758 1704 aa13.61□□□□□ -0.23
RACK1-234ENST00000515417 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
RACK1-234ENST00000515417 KTN1Q86UP2 1357 aaKnown RBP13.61□□□□□ -0.23
RACK1-234ENST00000515417 TMF1P82094 1093 aa13.61□□□□□ -0.23
RACK1-234ENST00000515417 CPSF1Q10570 1443 aaKnown RBP13.61□□□□□ -0.23
RACK1-234ENST00000515417 GLI3P10071 1580 aa13.61□□□□□ -0.23
RACK1-234ENST00000515417 TTC21BQ7Z4L5 1316 aa13.61□□□□□ -0.23
RACK1-234ENST00000515417 EIF4G2P78344 907 aaKnown RBP eCLIP13.6□□□□□ -0.23
RACK1-234ENST00000515417 SSH2Q76I76 1423 aa13.6□□□□□ -0.23
RACK1-234ENST00000515417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
RACK1-234ENST00000515417 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
RACK1-234ENST00000515417 A0A1W2PP64 1363 aa13.59□□□□□ -0.23
RACK1-234ENST00000515417 FAM83GA6ND36 823 aa13.59□□□□□ -0.23
RACK1-234ENST00000515417 BRWD3Q6RI45 1802 aa13.59□□□□□ -0.23
RACK1-234ENST00000515417 MARF1Q9Y4F3 1742 aaKnown RBP13.59□□□□□ -0.23
RACK1-234ENST00000515417 NLRP6P59044 892 aa13.58□□□□□ -0.24
RACK1-234ENST00000515417 ZC3H6P61129 1189 aaKnown RBP13.58□□□□□ -0.24
RACK1-234ENST00000515417 CHRNA2Q15822 529 aa13.58□□□□□ -0.24
RACK1-234ENST00000515417 HDGFL2Q7Z4V5 671 aaPredicted RBP13.58□□□□□ -0.24
RACK1-234ENST00000515417 USP19O94966 1318 aa13.58□□□□□ -0.24
RACK1-234ENST00000515417 KIAA0232Q92628 1395 aa13.58□□□□□ -0.24
RACK1-234ENST00000515417 CRYBG1Q9Y4K1 1723 aa13.57□□□□□ -0.24
RACK1-234ENST00000515417 ZBTB7CA1YPR0 619 aa13.57□□□□□ -0.24
RACK1-234ENST00000515417 SOX12O15370 315 aa13.57□□□□□ -0.24
RACK1-234ENST00000515417 NME9Q86XW9 330 aa13.57□□□□□ -0.24
RACK1-234ENST00000515417 UNC5CLQ8IV45 518 aa13.57□□□□□ -0.24
RACK1-234ENST00000515417 PUS7Q96PZ0 661 aaKnown RBP13.57□□□□□ -0.24
RACK1-234ENST00000515417 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
RACK1-234ENST00000515417 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
RACK1-234ENST00000515417 AKAP12Q02952 1782 aa13.57□□□□□ -0.24
RACK1-234ENST00000515417 PIK3C2AO00443 1686 aa13.56□□□□□ -0.24
RACK1-234ENST00000515417 SLIT2O94813 1529 aa13.56□□□□□ -0.24
RACK1-234ENST00000515417 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
RACK1-234ENST00000515417 NLRP13Q86W25 1043 aa13.56□□□□□ -0.24
RACK1-234ENST00000515417 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
RACK1-234ENST00000515417 TERF2IPQ9NYB0 399 aa13.56□□□□□ -0.24
RACK1-234ENST00000515417 NRKQ7Z2Y5 1582 aa13.56□□□□□ -0.24
RACK1-234ENST00000515417 PHRF1Q9P1Y6 1649 aaKnown RBP13.56□□□□□ -0.24
RACK1-234ENST00000515417 BRD4O60885 1362 aaPredicted RBP13.56□□□□□ -0.24
RACK1-234ENST00000515417 FAM182BQ5T319 152 aa13.55□□□□□ -0.24
RACK1-234ENST00000515417 MON2Q7Z3U7 1717 aa13.54□□□□□ -0.24
RACK1-234ENST00000515417 SLC24A1O60721 1099 aa13.54□□□□□ -0.24
RACK1-234ENST00000515417 GCP02774 474 aa13.54□□□□□ -0.24
RACK1-234ENST00000515417 BTG4Q9NY30 223 aa13.54□□□□□ -0.24
RACK1-234ENST00000515417 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
RACK1-234ENST00000515417 NINLQ9Y2I6 1382 aa13.54□□□□□ -0.24
RACK1-234ENST00000515417 EDC4Q6P2E9 1401 aaKnown RBP13.54□□□□□ -0.24
RACK1-234ENST00000515417 PLCH1Q4KWH8 1693 aa13.53□□□□□ -0.24
RACK1-234ENST00000515417 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
RACK1-234ENST00000515417 CDCA8Q53HL2 280 aa13.53□□□□□ -0.24
RACK1-234ENST00000515417 CCDC125Q86Z20 511 aa13.53□□□□□ -0.24
RACK1-234ENST00000515417 CCDC9Q9Y3X0 531 aaKnown RBP13.52□□□□□ -0.25
RACK1-234ENST00000515417 ANKRD36BQ8N2N9 1353 aa13.52□□□□□ -0.25
RACK1-234ENST00000515417 BLMP54132 1417 aaPredicted RBP13.52□□□□□ -0.25
RACK1-234ENST00000515417 SLIT3O75094 1523 aa13.51□□□□□ -0.25
RACK1-234ENST00000515417 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
RACK1-234ENST00000515417 COL14A1Q05707 1796 aaKnown RBP13.5□□□□□ -0.25
RACK1-234ENST00000515417 MYOM1P52179 1685 aa13.5□□□□□ -0.25
RACK1-234ENST00000515417 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.5□□□□□ -0.25
RACK1-234ENST00000515417 CPDO75976 1380 aa13.49□□□□□ -0.25
RACK1-234ENST00000515417 VPS72Q15906 364 aa13.49□□□□□ -0.25
RACK1-234ENST00000515417 CARD14Q9BXL6 1004 aa13.49□□□□□ -0.25
RACK1-234ENST00000515417 NSD3Q9BZ95 1437 aa13.48□□□□□ -0.25
RACK1-234ENST00000515417 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
RACK1-234ENST00000515417 NRAPQ86VF7 1730 aa13.48□□□□□ -0.25
RACK1-234ENST00000515417 FAM98CQ17RN3 349 aaKnown RBP13.48□□□□□ -0.25
RACK1-234ENST00000515417 KRT27Q7Z3Y8 459 aa13.48□□□□□ -0.25
RACK1-234ENST00000515417 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
RACK1-234ENST00000515417 NFAT5O94916 1531 aa13.48□□□□□ -0.25
RACK1-234ENST00000515417 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
RACK1-234ENST00000515417 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
RACK1-234ENST00000515417 A0A0G2JS52 829 aa13.47□□□□□ -0.25
RACK1-234ENST00000515417 ONECUT3O60422 494 aaPredicted RBP13.47□□□□□ -0.25
RACK1-234ENST00000515417 FBLN1P23142 703 aa13.47□□□□□ -0.25
RACK1-234ENST00000515417 MYT1Q01538 1121 aa13.47□□□□□ -0.25
RACK1-234ENST00000515417 EN1Q05925 392 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms