RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 CARD11Q9BXL7 1154 aa26.96■■□□□ 1.91
LPCAT1-206ENST00000514484 RGS12O14924 1447 aa26.96■■□□□ 1.91
LPCAT1-206ENST00000514484 CDK12Q9NYV4 1490 aaPredicted RBP26.95■■□□□ 1.91
LPCAT1-206ENST00000514484 ATRNO75882 1429 aa26.95■■□□□ 1.9
LPCAT1-206ENST00000514484 PHRF1Q9P1Y6 1649 aaKnown RBP26.94■■□□□ 1.9
LPCAT1-206ENST00000514484 PLEKHG3A1L390 1219 aa26.93■■□□□ 1.9
LPCAT1-206ENST00000514484 RBM6P78332 1123 aaKnown RBP26.93■■□□□ 1.9
LPCAT1-206ENST00000514484 SLIT2O94813 1529 aa26.93■■□□□ 1.9
LPCAT1-206ENST00000514484 EVC2Q86UK5 1308 aa26.92■■□□□ 1.9
LPCAT1-206ENST00000514484 TRPC5Q9UL62 973 aaPredicted RBP26.92■■□□□ 1.9
LPCAT1-206ENST00000514484 NWD2Q9ULI1 1742 aa26.92■■□□□ 1.9
LPCAT1-206ENST00000514484 NUTM2GQ5VZR2 741 aa26.89■■□□□ 1.9
LPCAT1-206ENST00000514484 NRAPQ86VF7 1730 aa26.87■■□□□ 1.89
LPCAT1-206ENST00000514484 CABP1Q9NZU7 370 aa26.87■■□□□ 1.89
LPCAT1-206ENST00000514484 AKAP12Q02952 1782 aa26.86■■□□□ 1.89
LPCAT1-206ENST00000514484 COL14A1Q05707 1796 aaKnown RBP26.86■■□□□ 1.89
LPCAT1-206ENST00000514484 GLI3P10071 1580 aa26.85■■□□□ 1.89
LPCAT1-206ENST00000514484 UNC5CLQ8IV45 518 aa26.85■■□□□ 1.89
LPCAT1-206ENST00000514484 SBNO2Q9Y2G9 1366 aa26.84■■□□□ 1.89
LPCAT1-206ENST00000514484 FAM83GA6ND36 823 aa26.83■■□□□ 1.89
LPCAT1-206ENST00000514484 NRKQ7Z2Y5 1582 aa26.83■■□□□ 1.89
LPCAT1-206ENST00000514484 USP6P35125 1406 aa26.82■■□□□ 1.88
LPCAT1-206ENST00000514484 PIK3C2AO00443 1686 aa26.8■■□□□ 1.88
LPCAT1-206ENST00000514484 ABTB2Q8N961 1025 aa26.8■■□□□ 1.88
LPCAT1-206ENST00000514484 GJD4Q96KN9 370 aaPredicted RBP26.8■■□□□ 1.88
LPCAT1-206ENST00000514484 ATAD2Q6PL18 1390 aa26.79■■□□□ 1.88
LPCAT1-206ENST00000514484 BRWD3Q6RI45 1802 aa26.77■■□□□ 1.88
LPCAT1-206ENST00000514484 MON2Q7Z3U7 1717 aa26.77■■□□□ 1.88
LPCAT1-206ENST00000514484 KIAA0232Q92628 1395 aa26.77■■□□□ 1.88
LPCAT1-206ENST00000514484 CLSPNQ9HAW4 1339 aa26.77■■□□□ 1.88
LPCAT1-206ENST00000514484 PRDM11Q9NQV5 511 aa26.76■■□□□ 1.87
LPCAT1-206ENST00000514484 BTG4Q9NY30 223 aa26.76■■□□□ 1.87
LPCAT1-206ENST00000514484 CCDC9Q9Y3X0 531 aaKnown RBP26.75■■□□□ 1.87
LPCAT1-206ENST00000514484 SSH2Q76I76 1423 aa26.74■■□□□ 1.87
LPCAT1-206ENST00000514484 USP19O94966 1318 aa26.74■■□□□ 1.87
LPCAT1-206ENST00000514484 ZC3H6P61129 1189 aaKnown RBP26.74■■□□□ 1.87
LPCAT1-206ENST00000514484 CHRNA2Q15822 529 aa26.74■■□□□ 1.87
LPCAT1-206ENST00000514484 ST20-MTHFSA0A0A6YYL1 179 aa26.73■■□□□ 1.87
LPCAT1-206ENST00000514484 VPS72Q15906 364 aa26.73■■□□□ 1.87
LPCAT1-206ENST00000514484 UPF1Q92900 1129 aaKnown RBP eCLIP26.73■■□□□ 1.87
LPCAT1-206ENST00000514484 BRD4O60885 1362 aaPredicted RBP26.72■■□□□ 1.87
LPCAT1-206ENST00000514484 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
LPCAT1-206ENST00000514484 CPSF1Q10570 1443 aaKnown RBP26.71■■□□□ 1.87
LPCAT1-206ENST00000514484 USP47Q96K76 1375 aa26.71■■□□□ 1.87
LPCAT1-206ENST00000514484 EP400Q96L91 3159 aa26.7■■□□□ 1.87
LPCAT1-206ENST00000514484 TESK2Q96S53 571 aa26.7■■□□□ 1.86
LPCAT1-206ENST00000514484 NLRP13Q86W25 1043 aa26.69■■□□□ 1.86
LPCAT1-206ENST00000514484 KTN1Q86UP2 1357 aaKnown RBP26.69■■□□□ 1.86
LPCAT1-206ENST00000514484 CD163L1Q9NR16 1453 aa26.68■■□□□ 1.86
LPCAT1-206ENST00000514484 TMC1Q8TDI8 760 aa26.68■■□□□ 1.86
LPCAT1-206ENST00000514484 LMO7Q8WWI1 1683 aa26.68■■□□□ 1.86
LPCAT1-206ENST00000514484 SLIT3O75094 1523 aa26.68■■□□□ 1.86
LPCAT1-206ENST00000514484 TTC21BQ7Z4L5 1316 aa26.67■■□□□ 1.86
LPCAT1-206ENST00000514484 NLRP6P59044 892 aa26.67■■□□□ 1.86
LPCAT1-206ENST00000514484 GCP02774 474 aa26.65■■□□□ 1.86
LPCAT1-206ENST00000514484 ZNF692Q9BU19 519 aaPredicted RBP26.65■■□□□ 1.86
LPCAT1-206ENST00000514484 TIMELESSQ9UNS1 1208 aa26.65■■□□□ 1.86
LPCAT1-206ENST00000514484 SLC12A5Q9H2X9 1139 aa26.64■■□□□ 1.86
LPCAT1-206ENST00000514484 STRN4Q9NRL3 753 aa26.64■■□□□ 1.86
LPCAT1-206ENST00000514484 CAMTA1Q9Y6Y1 1673 aa26.63■■□□□ 1.85
LPCAT1-206ENST00000514484 CPDO75976 1380 aa26.63■■□□□ 1.85
LPCAT1-206ENST00000514484 ZBTB7CA1YPR0 619 aa26.63■■□□□ 1.85
LPCAT1-206ENST00000514484 SEPT12Q8IYM1 358 aa26.62■■□□□ 1.85
LPCAT1-206ENST00000514484 A0A0G2JS52 829 aa26.61■■□□□ 1.85
LPCAT1-206ENST00000514484 MYT1Q01538 1121 aa26.61■■□□□ 1.85
LPCAT1-206ENST00000514484 FAM98CQ17RN3 349 aaKnown RBP26.61■■□□□ 1.85
LPCAT1-206ENST00000514484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.61■■□□□ 1.85
LPCAT1-206ENST00000514484 TTC21AQ8NDW8 1320 aa26.61■■□□□ 1.85
LPCAT1-206ENST00000514484 A0A1W2PP64 1363 aa26.6■■□□□ 1.85
LPCAT1-206ENST00000514484 SPATA31A5Q5VU36 1347 aa26.6■■□□□ 1.85
LPCAT1-206ENST00000514484 SPATA31A7Q8IWB4 1347 aa26.6■■□□□ 1.85
LPCAT1-206ENST00000514484 RGPD5Q99666 1765 aa26.59■■□□□ 1.85
LPCAT1-206ENST00000514484 COL18A1P39060 1754 aa26.58■■□□□ 1.85
LPCAT1-206ENST00000514484 USP54Q70EL1 1684 aa26.58■■□□□ 1.85
LPCAT1-206ENST00000514484 THSD7AQ9UPZ6 1657 aa26.58■■□□□ 1.85
LPCAT1-206ENST00000514484 SOX12O15370 315 aa26.58■■□□□ 1.85
LPCAT1-206ENST00000514484 ZRANB1Q9UGI0 708 aa26.58■■□□□ 1.85
LPCAT1-206ENST00000514484 HDGFL2Q7Z4V5 671 aaPredicted RBP26.57■■□□□ 1.84
LPCAT1-206ENST00000514484 NFAT5O94916 1531 aa26.56■■□□□ 1.84
LPCAT1-206ENST00000514484 PUS7Q96PZ0 661 aaKnown RBP26.56■■□□□ 1.84
LPCAT1-206ENST00000514484 NME9Q86XW9 330 aa26.55■■□□□ 1.84
LPCAT1-206ENST00000514484 EDC4Q6P2E9 1401 aaKnown RBP26.55■■□□□ 1.84
LPCAT1-206ENST00000514484 COL5A2P05997 1499 aaPredicted RBP26.55■■□□□ 1.84
LPCAT1-206ENST00000514484 ONECUT3O60422 494 aaPredicted RBP26.54■■□□□ 1.84
LPCAT1-206ENST00000514484 EVA1CP58658 441 aa26.54■■□□□ 1.84
LPCAT1-206ENST00000514484 TERF2IPQ9NYB0 399 aa26.54■■□□□ 1.84
LPCAT1-206ENST00000514484 SPATA31A1Q5TZJ5 1347 aa26.54■■□□□ 1.84
LPCAT1-206ENST00000514484 TMF1P82094 1093 aa26.53■■□□□ 1.84
LPCAT1-206ENST00000514484 USP35Q9P2H5 1018 aa26.53■■□□□ 1.84
LPCAT1-206ENST00000514484 NINLQ9Y2I6 1382 aa26.53■■□□□ 1.84
LPCAT1-206ENST00000514484 LTN1O94822 1766 aa26.53■■□□□ 1.84
LPCAT1-206ENST00000514484 MYOM1P52179 1685 aa26.52■■□□□ 1.84
LPCAT1-206ENST00000514484 LARP1Q6PKG0 1096 aaKnown RBP26.52■■□□□ 1.84
LPCAT1-206ENST00000514484 AATKQ6ZMQ8 1374 aa26.5■■□□□ 1.83
LPCAT1-206ENST00000514484 SLC24A1O60721 1099 aa26.5■■□□□ 1.83
LPCAT1-206ENST00000514484 KRT27Q7Z3Y8 459 aa26.5■■□□□ 1.83
LPCAT1-206ENST00000514484 USP31Q70CQ4 1352 aa26.49■■□□□ 1.83
LPCAT1-206ENST00000514484 KCNH5Q8NCM2 988 aa26.48■■□□□ 1.83
LPCAT1-206ENST00000514484 ARHGEF25Q86VW2 580 aa26.47■■□□□ 1.83
LPCAT1-206ENST00000514484 OVOS2A0A0J9YW53 1432 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms