RNA–Protein interactions for RNA: ENST00000513268.1

H2AFY-220, Transcript of H2A histone family member Y, humanhuman

TSL 3

Gene H2AFY, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-220ENST00000513268 ILDR2Q71H61 639 aa13□□□□□ -0.33
H2AFY-220ENST00000513268 RGS17Q9UGC6 210 aaPredicted RBP13□□□□□ -0.33
H2AFY-220ENST00000513268 PXDNQ92626 1479 aa12.99□□□□□ -0.33
H2AFY-220ENST00000513268 SBNO1A3KN83 1393 aa12.99□□□□□ -0.33
H2AFY-220ENST00000513268 MINK1Q8N4C8 1332 aaPredicted RBP12.99□□□□□ -0.33
H2AFY-220ENST00000513268 CENPJQ9HC77 1338 aaPredicted RBP12.99□□□□□ -0.33
H2AFY-220ENST00000513268 KRT28Q7Z3Y7 464 aa12.99□□□□□ -0.33
H2AFY-220ENST00000513268 DDX17Q92841 729 aaKnown RBP12.99□□□□□ -0.33
H2AFY-220ENST00000513268 CCDC61Q9Y6R9 512 aa12.99□□□□□ -0.33
H2AFY-220ENST00000513268 TULP4Q9NRJ4 1543 aa12.98□□□□□ -0.33
H2AFY-220ENST00000513268 SPATA31A3Q5VYP0 1347 aa12.98□□□□□ -0.33
H2AFY-220ENST00000513268 NUTM2FA1L443 756 aa12.98□□□□□ -0.33
H2AFY-220ENST00000513268 SOCS7O14512 581 aa12.98□□□□□ -0.33
H2AFY-220ENST00000513268 ROCK2O75116 1388 aaKnown RBP12.97□□□□□ -0.33
H2AFY-220ENST00000513268 ARHGEF28Q8N1W1 1705 aaKnown RBP12.97□□□□□ -0.33
H2AFY-220ENST00000513268 PLEKHG3A1L390 1219 aa12.97□□□□□ -0.33
H2AFY-220ENST00000513268 MEX3CQ5U5Q3 659 aaKnown RBP12.97□□□□□ -0.33
H2AFY-220ENST00000513268 NUDT16Q96DE0 195 aaKnown RBP12.97□□□□□ -0.33
H2AFY-220ENST00000513268 CDK19Q9BWU1 502 aa12.97□□□□□ -0.33
H2AFY-220ENST00000513268 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.33
H2AFY-220ENST00000513268 ARHGEF10O15013 1369 aa12.95□□□□□ -0.34
H2AFY-220ENST00000513268 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
H2AFY-220ENST00000513268 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
H2AFY-220ENST00000513268 PRR36Q9H6K5 1346 aa12.95□□□□□ -0.34
H2AFY-220ENST00000513268 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
H2AFY-220ENST00000513268 LRP6O75581 1613 aa12.95□□□□□ -0.34
H2AFY-220ENST00000513268 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
H2AFY-220ENST00000513268 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
H2AFY-220ENST00000513268 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
H2AFY-220ENST00000513268 FNBP4Q8N3X1 1017 aaPredicted RBP12.94□□□□□ -0.34
H2AFY-220ENST00000513268 PUS7Q96PZ0 661 aaKnown RBP12.94□□□□□ -0.34
H2AFY-220ENST00000513268 PCGF6Q9BYE7 350 aa12.94□□□□□ -0.34
H2AFY-220ENST00000513268 EVC2Q86UK5 1308 aa12.93□□□□□ -0.34
H2AFY-220ENST00000513268 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
H2AFY-220ENST00000513268 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
H2AFY-220ENST00000513268 GALR2O43603 387 aaPredicted RBP12.93□□□□□ -0.34
H2AFY-220ENST00000513268 NUTM2AQ8IVF1 878 aaPredicted RBP12.93□□□□□ -0.34
H2AFY-220ENST00000513268 NGDNQ8NEJ9 315 aaKnown RBP12.93□□□□□ -0.34
H2AFY-220ENST00000513268 CARD11Q9BXL7 1154 aa12.93□□□□□ -0.34
H2AFY-220ENST00000513268 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
H2AFY-220ENST00000513268 USP32Q8NFA0 1604 aa12.92□□□□□ -0.34
H2AFY-220ENST00000513268 TNS3Q68CZ2 1445 aa12.92□□□□□ -0.34
H2AFY-220ENST00000513268 POTEAQ6S8J7 498 aa12.92□□□□□ -0.34
H2AFY-220ENST00000513268 PMFBP1Q8TBY8 1022 aa12.92□□□□□ -0.34
H2AFY-220ENST00000513268 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
H2AFY-220ENST00000513268 ATP7BP35670 1465 aa12.91□□□□□ -0.34
H2AFY-220ENST00000513268 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
H2AFY-220ENST00000513268 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
H2AFY-220ENST00000513268 NGLY1Q96IV0 654 aa12.91□□□□□ -0.34
H2AFY-220ENST00000513268 SRPK2P78362 688 aaKnown RBP12.9□□□□□ -0.34
H2AFY-220ENST00000513268 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.34
H2AFY-220ENST00000513268 AFF2P51816 1311 aa12.89□□□□□ -0.35
H2AFY-220ENST00000513268 RGPD8O14715 1765 aaPredicted RBP12.89□□□□□ -0.35
H2AFY-220ENST00000513268 RXRBP28702 533 aa12.89□□□□□ -0.35
H2AFY-220ENST00000513268 C8orf37Q96NL8 207 aa12.89□□□□□ -0.35
H2AFY-220ENST00000513268 ACEP12821 1306 aa12.88□□□□□ -0.35
H2AFY-220ENST00000513268 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
H2AFY-220ENST00000513268 ADAMTS2O95450 1211 aa12.88□□□□□ -0.35
H2AFY-220ENST00000513268 RBM6P78332 1123 aaKnown RBP12.88□□□□□ -0.35
H2AFY-220ENST00000513268 CDK12Q9NYV4 1490 aaPredicted RBP12.88□□□□□ -0.35
H2AFY-220ENST00000513268 ATAD2Q6PL18 1390 aa12.87□□□□□ -0.35
H2AFY-220ENST00000513268 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
H2AFY-220ENST00000513268 TRPC5Q9UL62 973 aaPredicted RBP12.87□□□□□ -0.35
H2AFY-220ENST00000513268 PHF12Q96QT6 1004 aa12.86□□□□□ -0.35
H2AFY-220ENST00000513268 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
H2AFY-220ENST00000513268 USP21Q9UK80 565 aa12.86□□□□□ -0.35
H2AFY-220ENST00000513268 CABP1Q9NZU7 370 aa12.85□□□□□ -0.35
H2AFY-220ENST00000513268 PPIP5K1Q6PFW1 1433 aa12.85□□□□□ -0.35
H2AFY-220ENST00000513268 QRICH2Q9H0J4 1663 aa12.84□□□□□ -0.35
H2AFY-220ENST00000513268 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
H2AFY-220ENST00000513268 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
H2AFY-220ENST00000513268 UNC5CLQ8IV45 518 aa12.84□□□□□ -0.35
H2AFY-220ENST00000513268 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.35
H2AFY-220ENST00000513268 TRPM3Q9HCF6 1732 aaPredicted RBP12.83□□□□□ -0.36
H2AFY-220ENST00000513268 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
H2AFY-220ENST00000513268 SLIT2O94813 1529 aa12.83□□□□□ -0.36
H2AFY-220ENST00000513268 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
H2AFY-220ENST00000513268 BCL9LQ86UU0 1499 aa12.82□□□□□ -0.36
H2AFY-220ENST00000513268 ALS2Q96Q42 1657 aa12.82□□□□□ -0.36
H2AFY-220ENST00000513268 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
H2AFY-220ENST00000513268 ATRNO75882 1429 aa12.81□□□□□ -0.36
H2AFY-220ENST00000513268 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
H2AFY-220ENST00000513268 ABTB2Q8N961 1025 aa12.81□□□□□ -0.36
H2AFY-220ENST00000513268 TESK2Q96S53 571 aa12.81□□□□□ -0.36
H2AFY-220ENST00000513268 SSH2Q76I76 1423 aa12.8□□□□□ -0.36
H2AFY-220ENST00000513268 MARF1Q9Y4F3 1742 aaKnown RBP12.8□□□□□ -0.36
H2AFY-220ENST00000513268 ST20-MTHFSA0A0A6YYL1 179 aa12.8□□□□□ -0.36
H2AFY-220ENST00000513268 FAM83GA6ND36 823 aa12.8□□□□□ -0.36
H2AFY-220ENST00000513268 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
H2AFY-220ENST00000513268 GJD4Q96KN9 370 aaPredicted RBP12.8□□□□□ -0.36
H2AFY-220ENST00000513268 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
H2AFY-220ENST00000513268 USP6P35125 1406 aa12.79□□□□□ -0.36
H2AFY-220ENST00000513268 CPSF1Q10570 1443 aaKnown RBP12.79□□□□□ -0.36
H2AFY-220ENST00000513268 ONECUT3O60422 494 aaPredicted RBP12.79□□□□□ -0.36
H2AFY-220ENST00000513268 VPS72Q15906 364 aa12.79□□□□□ -0.36
H2AFY-220ENST00000513268 USP19O94966 1318 aa12.79□□□□□ -0.36
H2AFY-220ENST00000513268 OTUD5Q96G74 571 aa12.78□□□□□ -0.36
H2AFY-220ENST00000513268 TERF2IPQ9NYB0 399 aa12.78□□□□□ -0.36
H2AFY-220ENST00000513268 CPDO75976 1380 aa12.78□□□□□ -0.36
H2AFY-220ENST00000513268 TMF1P82094 1093 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms