RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 SSH2Q76I76 1423 aa12.74□□□□□ -0.37
DHFR-206ENST00000513048 NUTM2FA1L443 756 aa12.74□□□□□ -0.37
DHFR-206ENST00000513048 CNGB1Q14028 1251 aaPredicted RBP12.74□□□□□ -0.37
DHFR-206ENST00000513048 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
DHFR-206ENST00000513048 DCCP43146 1447 aa12.73□□□□□ -0.37
DHFR-206ENST00000513048 NSD2O96028 1365 aa12.73□□□□□ -0.37
DHFR-206ENST00000513048 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
DHFR-206ENST00000513048 ACEP12821 1306 aa12.72□□□□□ -0.37
DHFR-206ENST00000513048 C19orf44Q9H6X5 657 aa12.72□□□□□ -0.37
DHFR-206ENST00000513048 USP6P35125 1406 aa12.71□□□□□ -0.37
DHFR-206ENST00000513048 BRD4O60885 1362 aaPredicted RBP12.71□□□□□ -0.37
DHFR-206ENST00000513048 FYB1O15117 783 aa12.71□□□□□ -0.37
DHFR-206ENST00000513048 PPP2R1AP30153 589 aa12.71□□□□□ -0.37
DHFR-206ENST00000513048 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
DHFR-206ENST00000513048 C1orf167Q5SNV9 1468 aa12.71□□□□□ -0.38
DHFR-206ENST00000513048 MST1RQ04912 1400 aa12.71□□□□□ -0.38
DHFR-206ENST00000513048 NLRP13Q86W25 1043 aa12.7□□□□□ -0.38
DHFR-206ENST00000513048 LTBP4Q8N2S1 1624 aa12.7□□□□□ -0.38
DHFR-206ENST00000513048 C14orf37Q86TY3 774 aa12.69□□□□□ -0.38
DHFR-206ENST00000513048 PMFBP1Q8TBY8 1022 aa12.69□□□□□ -0.38
DHFR-206ENST00000513048 MRS2Q9HD23 443 aa12.69□□□□□ -0.38
DHFR-206ENST00000513048 TTC21BQ7Z4L5 1316 aa12.68□□□□□ -0.38
DHFR-206ENST00000513048 PHF8Q9UPP1 1060 aa12.68□□□□□ -0.38
DHFR-206ENST00000513048 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
DHFR-206ENST00000513048 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
DHFR-206ENST00000513048 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
DHFR-206ENST00000513048 NME9Q86XW9 330 aa12.67□□□□□ -0.38
DHFR-206ENST00000513048 GGNBP2Q9H3C7 697 aa12.67□□□□□ -0.38
DHFR-206ENST00000513048 MSH6P52701 1360 aa12.67□□□□□ -0.38
DHFR-206ENST00000513048 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
DHFR-206ENST00000513048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.66□□□□□ -0.38
DHFR-206ENST00000513048 PNISRQ8TF01 805 aaKnown RBP12.66□□□□□ -0.38
DHFR-206ENST00000513048 ORAI2Q96SN7 254 aa12.66□□□□□ -0.38
DHFR-206ENST00000513048 MARF1Q9Y4F3 1742 aaKnown RBP12.65□□□□□ -0.38
DHFR-206ENST00000513048 OVOS2A0A0J9YW53 1432 aa12.65□□□□□ -0.38
DHFR-206ENST00000513048 OVOS2Q6IE36 1432 aa12.65□□□□□ -0.38
DHFR-206ENST00000513048 PIK3C2AO00443 1686 aa12.65□□□□□ -0.38
DHFR-206ENST00000513048 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
DHFR-206ENST00000513048 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.38
DHFR-206ENST00000513048 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
DHFR-206ENST00000513048 TTC21AQ8NDW8 1320 aa12.64□□□□□ -0.39
DHFR-206ENST00000513048 ABCB7O75027 752 aa12.64□□□□□ -0.39
DHFR-206ENST00000513048 ATF3P18847 181 aa12.64□□□□□ -0.39
DHFR-206ENST00000513048 ESCO1Q5FWF5 840 aa12.64□□□□□ -0.39
DHFR-206ENST00000513048 TRPM3Q9HCF6 1732 aaPredicted RBP12.64□□□□□ -0.39
DHFR-206ENST00000513048 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
DHFR-206ENST00000513048 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
DHFR-206ENST00000513048 SHPRHQ149N8 1683 aa12.61□□□□□ -0.39
DHFR-206ENST00000513048 COL3A1P02461 1466 aaPredicted RBP12.61□□□□□ -0.39
DHFR-206ENST00000513048 AATKQ6ZMQ8 1374 aa12.61□□□□□ -0.39
DHFR-206ENST00000513048 TNNT2P45379 298 aaPredicted RBP12.61□□□□□ -0.39
DHFR-206ENST00000513048 YTHDC1Q96MU7 727 aaKnown RBP12.61□□□□□ -0.39
DHFR-206ENST00000513048 MAP2P11137 1827 aaKnown RBP12.6□□□□□ -0.39
DHFR-206ENST00000513048 INSRP06213 1382 aa12.59□□□□□ -0.39
DHFR-206ENST00000513048 PNPLA6Q8IY17 1366 aa12.59□□□□□ -0.39
DHFR-206ENST00000513048 ALS2Q96Q42 1657 aa12.59□□□□□ -0.39
DHFR-206ENST00000513048 FOXO3O43524 673 aa12.59□□□□□ -0.39
DHFR-206ENST00000513048 MTHFSP49914 203 aa12.59□□□□□ -0.39
DHFR-206ENST00000513048 FAM9BQ8IZU0 186 aa12.59□□□□□ -0.39
DHFR-206ENST00000513048 COG3Q96JB2 828 aa12.59□□□□□ -0.39
DHFR-206ENST00000513048 PXDNQ92626 1479 aa12.59□□□□□ -0.39
DHFR-206ENST00000513048 FBLN1P23142 703 aa12.58□□□□□ -0.4
DHFR-206ENST00000513048 PSME1Q06323 249 aa12.58□□□□□ -0.4
DHFR-206ENST00000513048 SLAIN2Q9P270 581 aa12.58□□□□□ -0.4
DHFR-206ENST00000513048 POLKQ9UBT6 870 aa12.58□□□□□ -0.4
DHFR-206ENST00000513048 BRINP3Q76B58 766 aa12.57□□□□□ -0.4
DHFR-206ENST00000513048 KRT28Q7Z3Y7 464 aa12.57□□□□□ -0.4
DHFR-206ENST00000513048 BLMP54132 1417 aaPredicted RBP12.56□□□□□ -0.4
DHFR-206ENST00000513048 PEAK1Q9H792 1746 aa12.56□□□□□ -0.4
DHFR-206ENST00000513048 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
DHFR-206ENST00000513048 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
DHFR-206ENST00000513048 CDK12Q9NYV4 1490 aaPredicted RBP12.55□□□□□ -0.4
DHFR-206ENST00000513048 XPCQ01831 940 aaPredicted RBP12.55□□□□□ -0.4
DHFR-206ENST00000513048 DDX17Q92841 729 aaKnown RBP12.55□□□□□ -0.4
DHFR-206ENST00000513048 SLIT3O75094 1523 aa12.55□□□□□ -0.4
DHFR-206ENST00000513048 NFAT5O94916 1531 aa12.54□□□□□ -0.4
DHFR-206ENST00000513048 NLRP6P59044 892 aa12.54□□□□□ -0.4
DHFR-206ENST00000513048 ABTB2Q8N961 1025 aa12.54□□□□□ -0.4
DHFR-206ENST00000513048 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
DHFR-206ENST00000513048 ADAMTS8Q9UP79 889 aa12.54□□□□□ -0.4
DHFR-206ENST00000513048 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
DHFR-206ENST00000513048 NPHP3Q7Z494 1330 aa12.54□□□□□ -0.4
DHFR-206ENST00000513048 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
DHFR-206ENST00000513048 NUTM2GQ5VZR2 741 aa12.53□□□□□ -0.4
DHFR-206ENST00000513048 USP19O94966 1318 aa12.53□□□□□ -0.4
DHFR-206ENST00000513048 MED1Q15648 1581 aaPredicted RBP12.52□□□□□ -0.4
DHFR-206ENST00000513048 CRYBG1Q9Y4K1 1723 aa12.52□□□□□ -0.41
DHFR-206ENST00000513048 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.41
DHFR-206ENST00000513048 CFAP53Q96M91 514 aa12.52□□□□□ -0.41
DHFR-206ENST00000513048 SOS2Q07890 1332 aaPredicted RBP12.52□□□□□ -0.41
DHFR-206ENST00000513048 TNS3Q68CZ2 1445 aa12.52□□□□□ -0.41
DHFR-206ENST00000513048 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.416e-6■■■■□ 19.8
DHFR-206ENST00000513048 MAP3K19Q56UN5 1328 aa12.51□□□□□ -0.41
DHFR-206ENST00000513048 SPATA31A3Q5VYP0 1347 aa12.51□□□□□ -0.41
DHFR-206ENST00000513048 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
DHFR-206ENST00000513048 WDR43Q15061 677 aaKnown RBP eCLIP12.5□□□□□ -0.417e-6■■■■■ 27.3
DHFR-206ENST00000513048 ROBO1Q9Y6N7 1651 aa12.5□□□□□ -0.41
DHFR-206ENST00000513048 LTN1O94822 1766 aa12.49□□□□□ -0.41
DHFR-206ENST00000513048 AHDC1Q5TGY3 1603 aaPredicted RBP12.49□□□□□ -0.41
DHFR-206ENST00000513048 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms