RNA–Protein interactions for RNA: ENST00000513027.3

RACK1-229, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-229ENST00000513027 SHPRHQ149N8 1683 aa16.41■□□□□ 0.22
RACK1-229ENST00000513027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.41■□□□□ 0.22
RACK1-229ENST00000513027 SSH2Q76I76 1423 aa16.41■□□□□ 0.22
RACK1-229ENST00000513027 NCKAP5LQ9HCH0 1330 aa16.41■□□□□ 0.22
RACK1-229ENST00000513027 TNNT2P45379 298 aaPredicted RBP16.4■□□□□ 0.22
RACK1-229ENST00000513027 RUNDC1Q96C34 613 aa16.4■□□□□ 0.22
RACK1-229ENST00000513027 NGDNQ8NEJ9 315 aaKnown RBP16.39■□□□□ 0.21
RACK1-229ENST00000513027 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
RACK1-229ENST00000513027 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
RACK1-229ENST00000513027 CDK12Q9NYV4 1490 aaPredicted RBP16.38■□□□□ 0.21
RACK1-229ENST00000513027 LRRC7Q96NW7 1537 aa16.38■□□□□ 0.21
RACK1-229ENST00000513027 DCCP43146 1447 aa16.37■□□□□ 0.21
RACK1-229ENST00000513027 COL3A1P02461 1466 aaPredicted RBP16.37■□□□□ 0.21
RACK1-229ENST00000513027 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
RACK1-229ENST00000513027 OVOS2A0A0J9YW53 1432 aa16.36■□□□□ 0.21
RACK1-229ENST00000513027 OVOS2Q6IE36 1432 aa16.36■□□□□ 0.21
RACK1-229ENST00000513027 KDM4FA0A1W2PPD8 638 aa16.36■□□□□ 0.21
RACK1-229ENST00000513027 CCDC27Q2M243 656 aa16.36■□□□□ 0.21
RACK1-229ENST00000513027 NME9Q86XW9 330 aa16.36■□□□□ 0.21
RACK1-229ENST00000513027 POLKQ9UBT6 870 aa16.36■□□□□ 0.21
RACK1-229ENST00000513027 ZNF521Q96K83 1311 aa16.36■□□□□ 0.21
RACK1-229ENST00000513027 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
RACK1-229ENST00000513027 PROSER2Q86WR7 435 aaPredicted RBP16.35■□□□□ 0.21
RACK1-229ENST00000513027 C19orf44Q9H6X5 657 aa16.35■□□□□ 0.21
RACK1-229ENST00000513027 KIF24Q5T7B8 1368 aa16.35■□□□□ 0.21
RACK1-229ENST00000513027 USP54Q70EL1 1684 aa16.34■□□□□ 0.21
RACK1-229ENST00000513027 FCHSD2O94868 740 aa16.34■□□□□ 0.21
RACK1-229ENST00000513027 PHF8Q9UPP1 1060 aa16.34■□□□□ 0.21
RACK1-229ENST00000513027 SUPT16HQ9Y5B9 1047 aaKnown RBP16.34■□□□□ 0.21
RACK1-229ENST00000513027 MAP2P11137 1827 aaKnown RBP16.33■□□□□ 0.21
RACK1-229ENST00000513027 APAF1O14727 1248 aa16.33■□□□□ 0.2
RACK1-229ENST00000513027 U2AF1L5P0DN76 240 aaPredicted RBP16.33■□□□□ 0.2
RACK1-229ENST00000513027 U2AF1Q01081 240 aaKnown RBP eCLIP16.33■□□□□ 0.2
RACK1-229ENST00000513027 RNF123Q5XPI4 1314 aa16.33■□□□□ 0.2
RACK1-229ENST00000513027 LMTK3Q96Q04 1460 aa16.33■□□□□ 0.2
RACK1-229ENST00000513027 RGPD8O14715 1765 aaPredicted RBP16.32■□□□□ 0.2
RACK1-229ENST00000513027 NEFMP07197 916 aa16.32■□□□□ 0.2
RACK1-229ENST00000513027 C14orf37Q86TY3 774 aa16.32■□□□□ 0.2
RACK1-229ENST00000513027 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
RACK1-229ENST00000513027 WDR63Q8IWG1 891 aa16.31■□□□□ 0.2
RACK1-229ENST00000513027 IQSEC2Q5JU85 1478 aa16.3■□□□□ 0.2
RACK1-229ENST00000513027 E9PSI1 815 aa16.3■□□□□ 0.2
RACK1-229ENST00000513027 FKBP8Q14318 412 aa16.3■□□□□ 0.2
RACK1-229ENST00000513027 PMFBP1Q8TBY8 1022 aa16.3■□□□□ 0.2
RACK1-229ENST00000513027 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
RACK1-229ENST00000513027 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
RACK1-229ENST00000513027 MAPK8IP3Q9UPT6 1336 aa16.29■□□□□ 0.2
RACK1-229ENST00000513027 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
RACK1-229ENST00000513027 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
RACK1-229ENST00000513027 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
RACK1-229ENST00000513027 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
RACK1-229ENST00000513027 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
RACK1-229ENST00000513027 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
RACK1-229ENST00000513027 SLFN5Q08AF3 891 aa16.27■□□□□ 0.2
RACK1-229ENST00000513027 CADPS2Q86UW7 1296 aa16.27■□□□□ 0.2
RACK1-229ENST00000513027 RCAN3Q9UKA8 241 aa16.27■□□□□ 0.2
RACK1-229ENST00000513027 ATF3P18847 181 aa16.26■□□□□ 0.19
RACK1-229ENST00000513027 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
RACK1-229ENST00000513027 WWC1Q8IX03 1113 aa16.26■□□□□ 0.19
RACK1-229ENST00000513027 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
RACK1-229ENST00000513027 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
RACK1-229ENST00000513027 IL13P35225 146 aa16.25■□□□□ 0.19
RACK1-229ENST00000513027 PSME1Q06323 249 aa16.25■□□□□ 0.19
RACK1-229ENST00000513027 SBNO1A3KN83 1393 aa16.25■□□□□ 0.19
RACK1-229ENST00000513027 TMEM94Q12767 1356 aa16.25■□□□□ 0.19
RACK1-229ENST00000513027 PIK3C2AO00443 1686 aa16.24■□□□□ 0.19
RACK1-229ENST00000513027 C1orf167Q5SNV9 1468 aa16.24■□□□□ 0.19
RACK1-229ENST00000513027 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
RACK1-229ENST00000513027 NLRP6P59044 892 aa16.24■□□□□ 0.19
RACK1-229ENST00000513027 DUSP27Q5VZP5 1158 aa16.24■□□□□ 0.19
RACK1-229ENST00000513027 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
RACK1-229ENST00000513027 EMILIN1Q9Y6C2 1016 aa16.24■□□□□ 0.19
RACK1-229ENST00000513027 MST1RQ04912 1400 aa16.24■□□□□ 0.19
RACK1-229ENST00000513027 FLT4P35916 1363 aa16.24■□□□□ 0.19
RACK1-229ENST00000513027 MSH6P52701 1360 aa16.24■□□□□ 0.19
RACK1-229ENST00000513027 STRCQ7RTU9 1775 aa16.23■□□□□ 0.19
RACK1-229ENST00000513027 IL16Q14005 1332 aa16.23■□□□□ 0.19
RACK1-229ENST00000513027 HSPA2P54652 639 aa16.23■□□□□ 0.19
RACK1-229ENST00000513027 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
RACK1-229ENST00000513027 ZRANB1Q9UGI0 708 aa16.23■□□□□ 0.19
RACK1-229ENST00000513027 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
RACK1-229ENST00000513027 CALD1Q05682 793 aaKnown RBP16.22■□□□□ 0.19
RACK1-229ENST00000513027 CDCA7LQ96GN5 454 aa16.22■□□□□ 0.19
RACK1-229ENST00000513027 RSPH6AQ9H0K4 717 aa16.22■□□□□ 0.19
RACK1-229ENST00000513027 MYH16Q9H6N6 1097 aa16.22■□□□□ 0.19
RACK1-229ENST00000513027 CT47B1P0C2W7 299 aaPredicted RBP16.21■□□□□ 0.19
RACK1-229ENST00000513027 TMPOP42166 694 aaKnown RBP16.21■□□□□ 0.19
RACK1-229ENST00000513027 LMOD3Q0VAK6 560 aa16.21■□□□□ 0.19
RACK1-229ENST00000513027 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.21■□□□□ 0.19
RACK1-229ENST00000513027 RRS1Q15050 365 aaKnown RBP16.2■□□□□ 0.18
RACK1-229ENST00000513027 STRCP1A6NGW2 1772 aa16.2■□□□□ 0.18
RACK1-229ENST00000513027 PPP4R2Q9NY27 417 aa16.19■□□□□ 0.18
RACK1-229ENST00000513027 MAP3K19Q56UN5 1328 aa16.19■□□□□ 0.18
RACK1-229ENST00000513027 ARHGEF10O15013 1369 aa16.18■□□□□ 0.18
RACK1-229ENST00000513027 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
RACK1-229ENST00000513027 AMPHP49418 695 aa16.18■□□□□ 0.18
RACK1-229ENST00000513027 RRP1P56182 461 aaKnown RBP16.18■□□□□ 0.18
RACK1-229ENST00000513027 PHRF1Q9P1Y6 1649 aaKnown RBP16.17■□□□□ 0.18
RACK1-229ENST00000513027 PRKAR2BP31323 418 aa16.17■□□□□ 0.18
RACK1-229ENST00000513027 EIF4A2Q14240 407 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms