RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 FYCO1Q9BQS8 1478 aa17.23■□□□□ 0.35
TRIO-218ENST00000512070 HNRNPMP52272 730 aaKnown RBP eCLIP17.22■□□□□ 0.359e-7■■■□□ 18.1
TRIO-218ENST00000512070 RAD21O60216 631 aa17.21■□□□□ 0.35
TRIO-218ENST00000512070 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.35
TRIO-218ENST00000512070 TRAK2O60296 914 aa17.21■□□□□ 0.35
TRIO-218ENST00000512070 HMGB2P26583 209 aaKnown RBP17.21■□□□□ 0.35
TRIO-218ENST00000512070 GCC1Q96CN9 775 aa17.21■□□□□ 0.35
TRIO-218ENST00000512070 SMC2O95347 1197 aa17.2■□□□□ 0.34
TRIO-218ENST00000512070 APAF1O14727 1248 aa17.2■□□□□ 0.34
TRIO-218ENST00000512070 PPFIBP1Q86W92 1011 aa17.2■□□□□ 0.34
TRIO-218ENST00000512070 WDR33Q9C0J8 1336 aaKnown RBP17.19■□□□□ 0.34
TRIO-218ENST00000512070 MCM3P25205 808 aa17.19■□□□□ 0.34
TRIO-218ENST00000512070 GBP2P32456 591 aaPredicted RBP17.19■□□□□ 0.34
TRIO-218ENST00000512070 CDKL5O76039 1030 aa17.19■□□□□ 0.34
TRIO-218ENST00000512070 SRCIN1Q9C0H9 1055 aa17.19■□□□□ 0.34
TRIO-218ENST00000512070 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRIO-218ENST00000512070 TSPYL4Q9UJ04 414 aa17.19■□□□□ 0.34
TRIO-218ENST00000512070 EIF2S2P20042 333 aaKnown RBP17.18■□□□□ 0.34
TRIO-218ENST00000512070 PLIN1O60240 522 aa17.18■□□□□ 0.34
TRIO-218ENST00000512070 TRIM22Q8IYM9 498 aa17.18■□□□□ 0.34
TRIO-218ENST00000512070 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
TRIO-218ENST00000512070 CFAP45Q9UL16 551 aa17.18■□□□□ 0.34
TRIO-218ENST00000512070 CIZ1Q9ULV3 898 aaPredicted RBP17.17■□□□□ 0.34
TRIO-218ENST00000512070 PDE3AQ14432 1141 aa17.17■□□□□ 0.34
TRIO-218ENST00000512070 NEFHP12036 1026 aa17.17■□□□□ 0.34
TRIO-218ENST00000512070 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
TRIO-218ENST00000512070 TRIM21P19474 475 aaKnown RBP17.17■□□□□ 0.34
TRIO-218ENST00000512070 RRP9O43818 475 aaKnown RBP17.17■□□□□ 0.34
TRIO-218ENST00000512070 CCDC112Q8NEF3 446 aa17.17■□□□□ 0.34
TRIO-218ENST00000512070 DEF6Q9H4E7 631 aa17.17■□□□□ 0.34
TRIO-218ENST00000512070 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
TRIO-218ENST00000512070 GNL3LQ9NVN8 582 aaKnown RBP17.17■□□□□ 0.34
TRIO-218ENST00000512070 CCDC181Q5TID7 509 aa17.16■□□□□ 0.34
TRIO-218ENST00000512070 GBP3Q9H0R5 595 aa17.16■□□□□ 0.34
TRIO-218ENST00000512070 PSME1Q06323 249 aa17.16■□□□□ 0.34
TRIO-218ENST00000512070 WASHC4Q2M389 1173 aa17.16■□□□□ 0.34
TRIO-218ENST00000512070 RIC3Q7Z5B4 369 aa17.16■□□□□ 0.34
TRIO-218ENST00000512070 DNAI2Q9GZS0 605 aa17.16■□□□□ 0.34
TRIO-218ENST00000512070 RAPGEF4Q8WZA2 1011 aa17.15■□□□□ 0.34
TRIO-218ENST00000512070 SLC4A3P48751 1232 aa17.15■□□□□ 0.34
TRIO-218ENST00000512070 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
TRIO-218ENST00000512070 SUPT6HQ7KZ85 1726 aaKnown RBP17.15■□□□□ 0.34
TRIO-218ENST00000512070 KRT85P78386 507 aa17.15■□□□□ 0.34
TRIO-218ENST00000512070 GAS2L2Q8NHY3 880 aa17.15■□□□□ 0.34
TRIO-218ENST00000512070 FAM107BQ9H098 131 aa17.14■□□□□ 0.34
TRIO-218ENST00000512070 FSD1Q9BTV5 496 aa17.14■□□□□ 0.33
TRIO-218ENST00000512070 STK38Q15208 465 aa17.14■□□□□ 0.33
TRIO-218ENST00000512070 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
TRIO-218ENST00000512070 ENOX2Q16206 610 aaKnown RBP17.13■□□□□ 0.33
TRIO-218ENST00000512070 MAP9Q49MG5 647 aa17.13■□□□□ 0.33
TRIO-218ENST00000512070 SLC26A8Q96RN1 970 aa17.13■□□□□ 0.33
TRIO-218ENST00000512070 SERPINC1P01008 464 aa17.13■□□□□ 0.33
TRIO-218ENST00000512070 NACAP1Q9BZK3 213 aa17.13■□□□□ 0.33
TRIO-218ENST00000512070 ZSCAN25Q6NSZ9 544 aa17.12■□□□□ 0.33
TRIO-218ENST00000512070 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
TRIO-218ENST00000512070 DYDC1Q8WWB3 177 aa17.12■□□□□ 0.33
TRIO-218ENST00000512070 KRT18P05783 430 aaKnown RBP17.11■□□□□ 0.33
TRIO-218ENST00000512070 TNMDQ9H2S6 317 aa17.11■□□□□ 0.33
TRIO-218ENST00000512070 CYP46A1Q9Y6A2 500 aa17.11■□□□□ 0.33
TRIO-218ENST00000512070 SMTNL1A8MU46 457 aa17.11■□□□□ 0.33
TRIO-218ENST00000512070 CCT4P50991 539 aaKnown RBP17.11■□□□□ 0.33
TRIO-218ENST00000512070 LRRCC1Q9C099 1032 aa17.11■□□□□ 0.33
TRIO-218ENST00000512070 NEUROD6Q96NK8 337 aa17.11■□□□□ 0.33
TRIO-218ENST00000512070 KRT32Q14532 448 aa17.1■□□□□ 0.33
TRIO-218ENST00000512070 CCDC91Q7Z6B0 441 aa17.1■□□□□ 0.33
TRIO-218ENST00000512070 GNAI2P04899 355 aa17.1■□□□□ 0.33
TRIO-218ENST00000512070 KIF6Q6ZMV9 814 aa17.1■□□□□ 0.33
TRIO-218ENST00000512070 FEZ1Q99689 392 aa17.1■□□□□ 0.33
TRIO-218ENST00000512070 NEK4P51957 841 aa17.09■□□□□ 0.33
TRIO-218ENST00000512070 BMP2KQ9NSY1 1161 aaPredicted RBP17.09■□□□□ 0.33
TRIO-218ENST00000512070 NOL7Q9UMY1 257 aaKnown RBP17.09■□□□□ 0.33
TRIO-218ENST00000512070 PLEKHH2Q8IVE3 1493 aa17.09■□□□□ 0.33
TRIO-218ENST00000512070 WASF1Q92558 559 aa17.09■□□□□ 0.33
TRIO-218ENST00000512070 IMMTQ16891 758 aaKnown RBP17.09■□□□□ 0.33
TRIO-218ENST00000512070 CEP57L1Q8IYX8 460 aa17.09■□□□□ 0.33
TRIO-218ENST00000512070 NCAPD3P42695 1498 aa17.09■□□□□ 0.33
TRIO-218ENST00000512070 CETN2P41208 172 aa17.09■□□□□ 0.33
TRIO-218ENST00000512070 JAKMIP3Q5VZ66 844 aa17.08■□□□□ 0.33
TRIO-218ENST00000512070 ZNF397Q8NF99 534 aaPredicted RBP17.08■□□□□ 0.33
TRIO-218ENST00000512070 FBXW7Q969H0 707 aa17.08■□□□□ 0.33
TRIO-218ENST00000512070 FGD6Q6ZV73 1430 aa17.08■□□□□ 0.32
TRIO-218ENST00000512070 CCDC27Q2M243 656 aa17.08■□□□□ 0.32
TRIO-218ENST00000512070 PAF1Q8N7H5 531 aa17.08■□□□□ 0.32
TRIO-218ENST00000512070 PLEKHH1Q9ULM0 1364 aa17.08■□□□□ 0.32
TRIO-218ENST00000512070 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
TRIO-218ENST00000512070 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
TRIO-218ENST00000512070 IKQ13123 557 aaPredicted RBP17.07■□□□□ 0.32
TRIO-218ENST00000512070 POLA1P09884 1462 aaPredicted RBP17.07■□□□□ 0.32
TRIO-218ENST00000512070 CCDC158Q5M9N0 1113 aa17.07■□□□□ 0.32
TRIO-218ENST00000512070 ZSCAN31Q96LW9 406 aaPredicted RBP17.07■□□□□ 0.32
TRIO-218ENST00000512070 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
TRIO-218ENST00000512070 POTEJP0CG39 1038 aa17.06■□□□□ 0.32
TRIO-218ENST00000512070 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
TRIO-218ENST00000512070 TMEM132AQ24JP5 1023 aa17.06■□□□□ 0.32
TRIO-218ENST00000512070 CTNNA3Q9UI47 895 aa17.06■□□□□ 0.32
TRIO-218ENST00000512070 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
TRIO-218ENST00000512070 CCDC57Q2TAC2 916 aa17.06■□□□□ 0.32
TRIO-218ENST00000512070 PNISRQ8TF01 805 aaKnown RBP17.06■□□□□ 0.32
TRIO-218ENST00000512070 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
TRIO-218ENST00000512070 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms