RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
CPNE4-209ENST00000512055 BACH2Q9BYV9 841 aa13.2□□□□□ -0.3
CPNE4-209ENST00000512055 C1orf115Q9H7X2 142 aa13.2□□□□□ -0.3
CPNE4-209ENST00000512055 PDZRN3Q9UPQ7 1066 aa13.2□□□□□ -0.3
CPNE4-209ENST00000512055 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
CPNE4-209ENST00000512055 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
CPNE4-209ENST00000512055 KDM6BO15054 1643 aa13.2□□□□□ -0.3
CPNE4-209ENST00000512055 CHMP4AQ9BY43 222 aa13.19□□□□□ -0.3
CPNE4-209ENST00000512055 DENND4BO75064 1496 aaPredicted RBP13.19□□□□□ -0.3
CPNE4-209ENST00000512055 RILPL2Q969X0 211 aa13.19□□□□□ -0.3
CPNE4-209ENST00000512055 CHMP3Q9Y3E7 222 aa13.19□□□□□ -0.3
CPNE4-209ENST00000512055 WDR7Q9Y4E6 1490 aa13.19□□□□□ -0.3
CPNE4-209ENST00000512055 TMPOP42166 694 aaKnown RBP13.19□□□□□ -0.3
CPNE4-209ENST00000512055 DUSP27Q5VZP5 1158 aa13.19□□□□□ -0.3
CPNE4-209ENST00000512055 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
CPNE4-209ENST00000512055 ABTB2Q8N961 1025 aa13.18□□□□□ -0.3
CPNE4-209ENST00000512055 ADGRL2O95490 1459 aa13.18□□□□□ -0.3
CPNE4-209ENST00000512055 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
CPNE4-209ENST00000512055 DYDC1Q8WWB3 177 aa13.18□□□□□ -0.3
CPNE4-209ENST00000512055 NUDT16Q96DE0 195 aaKnown RBP13.18□□□□□ -0.3
CPNE4-209ENST00000512055 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
CPNE4-209ENST00000512055 PHF14O94880 888 aa13.17□□□□□ -0.3
CPNE4-209ENST00000512055 RBM25P49756 843 aaKnown RBP13.17□□□□□ -0.3
CPNE4-209ENST00000512055 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
CPNE4-209ENST00000512055 CSPP1Q1MSJ5 1256 aa13.16□□□□□ -0.3
CPNE4-209ENST00000512055 ISY1Q9ULR0 285 aaKnown RBP13.16□□□□□ -0.3
CPNE4-209ENST00000512055 AAMPQ13685 434 aa13.16□□□□□ -0.3
CPNE4-209ENST00000512055 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
CPNE4-209ENST00000512055 ABCC2Q92887 1545 aa13.16□□□□□ -0.3
CPNE4-209ENST00000512055 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
CPNE4-209ENST00000512055 R3HCC1Q9Y3T6 440 aaKnown RBP13.16□□□□□ -0.3
CPNE4-209ENST00000512055 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
CPNE4-209ENST00000512055 PER1O15534 1290 aaPredicted RBP13.16□□□□□ -0.3
CPNE4-209ENST00000512055 FBLN1P23142 703 aa13.16□□□□□ -0.3
CPNE4-209ENST00000512055 NME9Q86XW9 330 aa13.16□□□□□ -0.3
CPNE4-209ENST00000512055 FOXD4L5Q5VV16 416 aaPredicted RBP13.15□□□□□ -0.3
CPNE4-209ENST00000512055 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
CPNE4-209ENST00000512055 MTERF4Q7Z6M4 381 aaKnown RBP13.15□□□□□ -0.3
CPNE4-209ENST00000512055 FOXD4L4Q8WXT5 416 aaPredicted RBP13.15□□□□□ -0.3
CPNE4-209ENST00000512055 A2MP01023 1474 aa13.15□□□□□ -0.3
CPNE4-209ENST00000512055 TAF3Q5VWG9 929 aa13.15□□□□□ -0.3
CPNE4-209ENST00000512055 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
CPNE4-209ENST00000512055 PES1O00541 588 aaKnown RBP13.15□□□□□ -0.3
CPNE4-209ENST00000512055 ESCO1Q5FWF5 840 aa13.14□□□□□ -0.31
CPNE4-209ENST00000512055 CEBPAP49715 358 aaPredicted RBP13.14□□□□□ -0.31
CPNE4-209ENST00000512055 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
CPNE4-209ENST00000512055 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
CPNE4-209ENST00000512055 THEMISQ8N1K5 641 aaPredicted RBP13.14□□□□□ -0.31
CPNE4-209ENST00000512055 C22orf23Q9BZE7 217 aa13.14□□□□□ -0.31
CPNE4-209ENST00000512055 FCHSD2O94868 740 aa13.14□□□□□ -0.31
CPNE4-209ENST00000512055 RUFY1Q96T51 708 aa13.14□□□□□ -0.31
CPNE4-209ENST00000512055 MSH5O43196 834 aa13.14□□□□□ -0.31
CPNE4-209ENST00000512055 ARGLU1Q9NWB6 273 aaPredicted RBP13.14□□□□□ -0.31
CPNE4-209ENST00000512055 EMILIN1Q9Y6C2 1016 aa13.14□□□□□ -0.31
CPNE4-209ENST00000512055 DDX49Q9Y6V7 483 aaKnown RBP13.14□□□□□ -0.31
CPNE4-209ENST00000512055 ARHGEF12Q9NZN5 1544 aa13.14□□□□□ -0.31
CPNE4-209ENST00000512055 RARSP54136 660 aaKnown RBP13.14□□□□□ -0.31
CPNE4-209ENST00000512055 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
CPNE4-209ENST00000512055 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
CPNE4-209ENST00000512055 GCC2Q8IWJ2 1684 aa13.13□□□□□ -0.31
CPNE4-209ENST00000512055 CCDC9Q9Y3X0 531 aaKnown RBP13.13□□□□□ -0.31
CPNE4-209ENST00000512055 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
CPNE4-209ENST00000512055 DDX11L8A8MPP1 907 aa13.13□□□□□ -0.31
CPNE4-209ENST00000512055 AK7Q96M32 723 aa13.13□□□□□ -0.31
CPNE4-209ENST00000512055 ST18O60284 1047 aa13.12□□□□□ -0.31
CPNE4-209ENST00000512055 DCTN1Q14203 1278 aa13.12□□□□□ -0.31
CPNE4-209ENST00000512055 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
CPNE4-209ENST00000512055 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
CPNE4-209ENST00000512055 UHRF1BP1Q6BDS2 1440 aa13.12□□□□□ -0.31
CPNE4-209ENST00000512055 CDR1P51861 262 aa13.12□□□□□ -0.31
CPNE4-209ENST00000512055 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
CPNE4-209ENST00000512055 HDAC5Q9UQL6 1122 aa13.12□□□□□ -0.31
CPNE4-209ENST00000512055 ZNF518AQ6AHZ1 1483 aa13.12□□□□□ -0.31
CPNE4-209ENST00000512055 SKIDA1Q1XH10 827 aa13.11□□□□□ -0.31
CPNE4-209ENST00000512055 NKTRP30414 1462 aaKnown RBP13.11□□□□□ -0.31
CPNE4-209ENST00000512055 GOLGA6L19H0YKK7 550 aa13.11□□□□□ -0.31
CPNE4-209ENST00000512055 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
CPNE4-209ENST00000512055 DEF6Q9H4E7 631 aa13.11□□□□□ -0.31
CPNE4-209ENST00000512055 NFE2L2Q16236 605 aa13.11□□□□□ -0.31
CPNE4-209ENST00000512055 TSR1Q2NL82 804 aaKnown RBP13.11□□□□□ -0.31
CPNE4-209ENST00000512055 ACBD3Q9H3P7 528 aa13.11□□□□□ -0.31
CPNE4-209ENST00000512055 KIF3AQ9Y496 699 aa13.11□□□□□ -0.31
CPNE4-209ENST00000512055 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
CPNE4-209ENST00000512055 NFKBIBQ15653 356 aa13.1□□□□□ -0.31
CPNE4-209ENST00000512055 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
CPNE4-209ENST00000512055 BECN2A8MW95 431 aa13.1□□□□□ -0.31
CPNE4-209ENST00000512055 RASSF8Q8NHQ8 419 aa13.1□□□□□ -0.31
CPNE4-209ENST00000512055 NLRP2Q9NX02 1062 aa13.1□□□□□ -0.31
CPNE4-209ENST00000512055 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
CPNE4-209ENST00000512055 WASLO00401 505 aaPredicted RBP13.09□□□□□ -0.31
CPNE4-209ENST00000512055 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
CPNE4-209ENST00000512055 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
CPNE4-209ENST00000512055 MNS1Q8NEH6 495 aa13.09□□□□□ -0.31
CPNE4-209ENST00000512055 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
CPNE4-209ENST00000512055 GORABQ5T7V8 394 aa13.09□□□□□ -0.31
CPNE4-209ENST00000512055 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
CPNE4-209ENST00000512055 ASXL1Q8IXJ9 1541 aa13.09□□□□□ -0.31
CPNE4-209ENST00000512055 FOXD4L6Q3SYB3 417 aaPredicted RBP13.09□□□□□ -0.31
CPNE4-209ENST00000512055 FOXD4L3Q6VB84 417 aaPredicted RBP13.09□□□□□ -0.31
CPNE4-209ENST00000512055 GPRASP1Q5JY77 1395 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms