RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
CALCOCO2-212ENST00000509014 PPP1R18Q6NYC8 613 aa9.79□□□□□ -0.84
CALCOCO2-212ENST00000509014 LYPD8Q6UX82 237 aa9.79□□□□□ -0.84
CALCOCO2-212ENST00000509014 HELBQ8NG08 1087 aaPredicted RBP9.79□□□□□ -0.84
CALCOCO2-212ENST00000509014 RNF223E7ERA6 249 aa9.78□□□□□ -0.84
CALCOCO2-212ENST00000509014 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
CALCOCO2-212ENST00000509014 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
CALCOCO2-212ENST00000509014 PTPRNQ16849 979 aa9.77□□□□□ -0.85
CALCOCO2-212ENST00000509014 LRRN4Q8WUT4 740 aa9.77□□□□□ -0.85
CALCOCO2-212ENST00000509014 PRKD2Q9BZL6 878 aa9.77□□□□□ -0.85
CALCOCO2-212ENST00000509014 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
CALCOCO2-212ENST00000509014 ZNF608Q9ULD9 1512 aaPredicted RBP9.77□□□□□ -0.85
CALCOCO2-212ENST00000509014 LCE2BO14633 110 aa9.76□□□□□ -0.85
CALCOCO2-212ENST00000509014 TRAF7Q6Q0C0 670 aa9.76□□□□□ -0.85
CALCOCO2-212ENST00000509014 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
CALCOCO2-212ENST00000509014 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.76□□□□□ -0.85
CALCOCO2-212ENST00000509014 SNRKQ9NRH2 765 aa9.76□□□□□ -0.85
CALCOCO2-212ENST00000509014 FCF1Q9Y324 198 aaKnown RBP9.76□□□□□ -0.85
CALCOCO2-212ENST00000509014 NUDT12Q9BQG2 462 aa9.75□□□□□ -0.85
CALCOCO2-212ENST00000509014 CHD1O14646 1710 aa9.74□□□□□ -0.85
CALCOCO2-212ENST00000509014 F12P00748 615 aaPredicted RBP9.74□□□□□ -0.85
CALCOCO2-212ENST00000509014 CCNYL3P0C7X3 344 aa9.74□□□□□ -0.85
CALCOCO2-212ENST00000509014 MCM6Q14566 821 aa9.74□□□□□ -0.85
CALCOCO2-212ENST00000509014 PLA2G2CQ5R387 149 aa9.74□□□□□ -0.85
CALCOCO2-212ENST00000509014 MTMR14Q8NCE2 650 aa9.74□□□□□ -0.85
CALCOCO2-212ENST00000509014 GGCXP38435 758 aa9.73□□□□□ -0.85
CALCOCO2-212ENST00000509014 CYB5RLQ6IPT4 315 aa9.73□□□□□ -0.85
CALCOCO2-212ENST00000509014 ANKLE1Q8NAG6 615 aa9.73□□□□□ -0.85
CALCOCO2-212ENST00000509014 EVA1BQ9NVM1 165 aa9.72□□□□□ -0.85
CALCOCO2-212ENST00000509014 MAP10Q9P2G4 905 aa9.72□□□□□ -0.85
CALCOCO2-212ENST00000509014 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
CALCOCO2-212ENST00000509014 IFT140Q96RY7 1462 aa9.72□□□□□ -0.85
CALCOCO2-212ENST00000509014 SOCS7O14512 581 aa9.71□□□□□ -0.86
CALCOCO2-212ENST00000509014 EMID1Q96A84 441 aaPredicted RBP9.71□□□□□ -0.86
CALCOCO2-212ENST00000509014 GJD4Q96KN9 370 aaPredicted RBP9.71□□□□□ -0.86
CALCOCO2-212ENST00000509014 TRIM34Q9BYJ4 488 aa9.71□□□□□ -0.86
CALCOCO2-212ENST00000509014 EIF4G3O43432 1585 aaKnown RBP9.71□□□□□ -0.86
CALCOCO2-212ENST00000509014 PTCRAQ6ISU1 281 aaPredicted RBP9.7□□□□□ -0.86
CALCOCO2-212ENST00000509014 EPS8L1Q8TE68 723 aa9.7□□□□□ -0.86
CALCOCO2-212ENST00000509014 NRG2O14511 850 aaPredicted RBP9.69□□□□□ -0.86
CALCOCO2-212ENST00000509014 TOP2AP11388 1531 aaKnown RBP9.69□□□□□ -0.86
CALCOCO2-212ENST00000509014 KCNH2Q12809 1159 aa9.69□□□□□ -0.86
CALCOCO2-212ENST00000509014 CCDC24Q8N4L8 307 aa9.69□□□□□ -0.86
CALCOCO2-212ENST00000509014 FLIIQ13045 1269 aa9.68□□□□□ -0.86
CALCOCO2-212ENST00000509014 NR6A1Q15406 480 aa9.68□□□□□ -0.86
CALCOCO2-212ENST00000509014 V9GY48 417 aaPredicted RBP9.67□□□□□ -0.86
CALCOCO2-212ENST00000509014 TOPBP1Q92547 1522 aa9.66□□□□□ -0.86
CALCOCO2-212ENST00000509014 GPR37L1O60883 481 aa9.66□□□□□ -0.86
CALCOCO2-212ENST00000509014 CTHP32929 405 aa9.66□□□□□ -0.86
CALCOCO2-212ENST00000509014 UNC93B1Q9H1C4 597 aa9.66□□□□□ -0.86
CALCOCO2-212ENST00000509014 LIAT1Q6ZQX7 453 aa9.65□□□□□ -0.86
CALCOCO2-212ENST00000509014 TARBP1Q13395 1621 aaKnown RBP9.64□□□□□ -0.87
CALCOCO2-212ENST00000509014 PDZRN3Q9UPQ7 1066 aa9.64□□□□□ -0.87
CALCOCO2-212ENST00000509014 RSF1Q96T23 1441 aaPredicted RBP9.63□□□□□ -0.87
CALCOCO2-212ENST00000509014 POM121Q96HA1 1249 aa9.62□□□□□ -0.87
CALCOCO2-212ENST00000509014 TBC1D2BQ9UPU7 963 aa9.62□□□□□ -0.87
CALCOCO2-212ENST00000509014 AQRO60306 1485 aaKnown RBP eCLIP9.61□□□□□ -0.871e-6■■■■□ 26.1
CALCOCO2-212ENST00000509014 RPIAP49247 311 aa9.61□□□□□ -0.87
CALCOCO2-212ENST00000509014 TRIM32Q13049 653 aa9.61□□□□□ -0.87
CALCOCO2-212ENST00000509014 FKBPLQ9UIM3 349 aa9.61□□□□□ -0.87
CALCOCO2-212ENST00000509014 DNMBPQ6XZF7 1577 aa9.6□□□□□ -0.87
CALCOCO2-212ENST00000509014 APBB1O00213 710 aa9.6□□□□□ -0.87
CALCOCO2-212ENST00000509014 SLC19A1P41440 591 aa9.6□□□□□ -0.87
CALCOCO2-212ENST00000509014 COG6Q9Y2V7 657 aa9.6□□□□□ -0.87
CALCOCO2-212ENST00000509014 NDUFB9Q9Y6M9 179 aa9.6□□□□□ -0.87
CALCOCO2-212ENST00000509014 ABCC8Q09428 1581 aa9.59□□□□□ -0.87
CALCOCO2-212ENST00000509014 UBTFP17480 764 aaKnown RBP9.59□□□□□ -0.87
CALCOCO2-212ENST00000509014 ZNF787Q6DD87 383 aa9.59□□□□□ -0.87
CALCOCO2-212ENST00000509014 BAP1Q92560 729 aa9.59□□□□□ -0.87
CALCOCO2-212ENST00000509014 GDPD2Q9HCC8 539 aa9.59□□□□□ -0.87
CALCOCO2-212ENST00000509014 CLASP1Q7Z460 1538 aa9.58□□□□□ -0.88
CALCOCO2-212ENST00000509014 ZBTB24O43167 697 aaPredicted RBP9.58□□□□□ -0.88
CALCOCO2-212ENST00000509014 SKOR1P84550 965 aa9.58□□□□□ -0.88
CALCOCO2-212ENST00000509014 LINC01559Q495D7 138 aa9.58□□□□□ -0.88
CALCOCO2-212ENST00000509014 CCDC88BA6NC98 1476 aa9.58□□□□□ -0.88
CALCOCO2-212ENST00000509014 SPRYD7Q5W111 196 aa9.57□□□□□ -0.88
CALCOCO2-212ENST00000509014 ZNF511Q8NB15 262 aa9.57□□□□□ -0.88
CALCOCO2-212ENST00000509014 ARMC2Q8NEN0 867 aa9.57□□□□□ -0.88
CALCOCO2-212ENST00000509014 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
CALCOCO2-212ENST00000509014 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
CALCOCO2-212ENST00000509014 SH3BP2P78314 561 aa9.56□□□□□ -0.88
CALCOCO2-212ENST00000509014 IRF5Q13568 498 aa9.56□□□□□ -0.88
CALCOCO2-212ENST00000509014 NBPF14Q5TI25 921 aa9.55□□□□□ -0.88
CALCOCO2-212ENST00000509014 SH3BP5LQ7L8J4 393 aa9.55□□□□□ -0.88
CALCOCO2-212ENST00000509014 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
CALCOCO2-212ENST00000509014 OCSTAMPQ9BR26 566 aa9.55□□□□□ -0.88
CALCOCO2-212ENST00000509014 WNT7BP56706 349 aa9.54□□□□□ -0.88
CALCOCO2-212ENST00000509014 FOXJ1Q92949 421 aa9.54□□□□□ -0.88
CALCOCO2-212ENST00000509014 POLA1P09884 1462 aaPredicted RBP9.53□□□□□ -0.88
CALCOCO2-212ENST00000509014 CD2BP2O95400 341 aaKnown RBP9.53□□□□□ -0.88
CALCOCO2-212ENST00000509014 ABL2P42684 1182 aa9.53□□□□□ -0.88
CALCOCO2-212ENST00000509014 C4orf48Q5BLP8 95 aa9.53□□□□□ -0.88
CALCOCO2-212ENST00000509014 PDXDC2PQ6P474 469 aa9.53□□□□□ -0.88
CALCOCO2-212ENST00000509014 SH3RF1Q7Z6J0 888 aa9.53□□□□□ -0.88
CALCOCO2-212ENST00000509014 PNMA1Q8ND90 353 aa9.53□□□□□ -0.88
CALCOCO2-212ENST00000509014 PRM3Q9NNZ6 103 aa9.53□□□□□ -0.88
CALCOCO2-212ENST00000509014 ZNF697Q5TEC3 545 aa9.52□□□□□ -0.89
CALCOCO2-212ENST00000509014 ZNF598Q86UK7 904 aaKnown RBP9.52□□□□□ -0.89
CALCOCO2-212ENST00000509014 RAD54L2Q9Y4B4 1467 aa9.52□□□□□ -0.89
CALCOCO2-212ENST00000509014 SYNJ1O43426 1573 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms