RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 SMC4Q9NTJ3 1288 aa12.49□□□□□ -0.41
SEC31A-227ENST00000508502 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
SEC31A-227ENST00000508502 CD163L1Q9NR16 1453 aa12.49□□□□□ -0.41
SEC31A-227ENST00000508502 DZIP1LQ8IYY4 767 aaKnown RBP12.49□□□□□ -0.41
SEC31A-227ENST00000508502 CABP1Q9NZU7 370 aa12.49□□□□□ -0.41
SEC31A-227ENST00000508502 PDZRN3Q9UPQ7 1066 aa12.49□□□□□ -0.41
SEC31A-227ENST00000508502 COL3A1P02461 1466 aaPredicted RBP12.49□□□□□ -0.41
SEC31A-227ENST00000508502 USP19O94966 1318 aa12.49□□□□□ -0.41
SEC31A-227ENST00000508502 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
SEC31A-227ENST00000508502 DIAPH1O60610 1272 aaKnown RBP12.48□□□□□ -0.41
SEC31A-227ENST00000508502 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
SEC31A-227ENST00000508502 RIPK4P57078 832 aa12.47□□□□□ -0.41
SEC31A-227ENST00000508502 VIRMAQ69YN4 1812 aaKnown RBP12.47□□□□□ -0.41
SEC31A-227ENST00000508502 ALKQ9UM73 1620 aa12.47□□□□□ -0.41
SEC31A-227ENST00000508502 NLRP1Q9C000 1473 aa12.47□□□□□ -0.41
SEC31A-227ENST00000508502 MED14O60244 1454 aa12.46□□□□□ -0.41
SEC31A-227ENST00000508502 SSH1Q8WYL5 1049 aa12.46□□□□□ -0.41
SEC31A-227ENST00000508502 CLTCQ00610 1675 aaKnown RBP12.46□□□□□ -0.41
SEC31A-227ENST00000508502 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.46□□□□□ -0.414e-7■■□□□ 13.2
SEC31A-227ENST00000508502 TRIM27P14373 513 aa12.45□□□□□ -0.42
SEC31A-227ENST00000508502 ANKRD26Q9UPS8 1709 aa12.45□□□□□ -0.42
SEC31A-227ENST00000508502 ARHGEF40Q8TER5 1519 aa12.45□□□□□ -0.42
SEC31A-227ENST00000508502 FAM69CQ0P6D2 419 aa12.45□□□□□ -0.42
SEC31A-227ENST00000508502 WAPLQ7Z5K2 1190 aa12.45□□□□□ -0.42
SEC31A-227ENST00000508502 PNNQ9H307 717 aaKnown RBP12.45□□□□□ -0.42
SEC31A-227ENST00000508502 IL16Q14005 1332 aa12.45□□□□□ -0.42
SEC31A-227ENST00000508502 ITPRIPQ8IWB1 547 aa12.44□□□□□ -0.42
SEC31A-227ENST00000508502 FBLN1P23142 703 aa12.44□□□□□ -0.42
SEC31A-227ENST00000508502 ATF7IPQ6VMQ6 1270 aa12.44□□□□□ -0.42
SEC31A-227ENST00000508502 NOB1Q9ULX3 412 aaKnown RBP12.44□□□□□ -0.42
SEC31A-227ENST00000508502 PNPLA6Q8IY17 1366 aa12.43□□□□□ -0.42
SEC31A-227ENST00000508502 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
SEC31A-227ENST00000508502 DDX19BQ9UMR2 479 aa12.42□□□□□ -0.42
SEC31A-227ENST00000508502 FCHSD2O94868 740 aa12.42□□□□□ -0.42
SEC31A-227ENST00000508502 BECN1Q14457 450 aa12.42□□□□□ -0.42
SEC31A-227ENST00000508502 ZMYM3Q14202 1370 aa12.42□□□□□ -0.42
SEC31A-227ENST00000508502 FRAT2O75474 233 aaPredicted RBP12.42□□□□□ -0.42
SEC31A-227ENST00000508502 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
SEC31A-227ENST00000508502 GSE1Q14687 1217 aa12.42□□□□□ -0.42
SEC31A-227ENST00000508502 MLECQ14165 292 aa12.41□□□□□ -0.42
SEC31A-227ENST00000508502 POLKQ9UBT6 870 aa12.41□□□□□ -0.42
SEC31A-227ENST00000508502 KIF20BQ96Q89 1820 aa12.41□□□□□ -0.42
SEC31A-227ENST00000508502 TMEM57Q8N5G2 664 aa12.41□□□□□ -0.42
SEC31A-227ENST00000508502 A2ML1A8K2U0 1454 aa12.4□□□□□ -0.42
SEC31A-227ENST00000508502 RIMS2Q9UQ26 1411 aa12.4□□□□□ -0.42
SEC31A-227ENST00000508502 RSPH6AQ9H0K4 717 aa12.4□□□□□ -0.42
SEC31A-227ENST00000508502 HDAC1Q13547 482 aaPredicted RBP12.4□□□□□ -0.42
SEC31A-227ENST00000508502 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
SEC31A-227ENST00000508502 IPO8O15397 1037 aaKnown RBP12.39□□□□□ -0.43
SEC31A-227ENST00000508502 HMOX1P09601 288 aa12.39□□□□□ -0.43
SEC31A-227ENST00000508502 TBC1D32Q96NH3 1257 aa12.39□□□□□ -0.43
SEC31A-227ENST00000508502 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
SEC31A-227ENST00000508502 PPP6R1Q9UPN7 881 aa12.39□□□□□ -0.43
SEC31A-227ENST00000508502 ATP7BP35670 1465 aa12.38□□□□□ -0.43
SEC31A-227ENST00000508502 DLC1Q96QB1 1528 aa12.38□□□□□ -0.43
SEC31A-227ENST00000508502 TSPOAP1O95153 1857 aa12.38□□□□□ -0.43
SEC31A-227ENST00000508502 PHACTR3Q96KR7 559 aa12.38□□□□□ -0.43
SEC31A-227ENST00000508502 SLKQ9H2G2 1235 aaPredicted RBP12.38□□□□□ -0.43
SEC31A-227ENST00000508502 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
SEC31A-227ENST00000508502 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
SEC31A-227ENST00000508502 ALDH1L2Q3SY69 923 aa12.37□□□□□ -0.43
SEC31A-227ENST00000508502 ZBTB40Q9NUA8 1239 aa12.37□□□□□ -0.43
SEC31A-227ENST00000508502 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
SEC31A-227ENST00000508502 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
SEC31A-227ENST00000508502 NME9Q86XW9 330 aa12.37□□□□□ -0.43
SEC31A-227ENST00000508502 WASLO00401 505 aaPredicted RBP12.36□□□□□ -0.43
SEC31A-227ENST00000508502 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
SEC31A-227ENST00000508502 AGLP35573 1532 aa12.36□□□□□ -0.43
SEC31A-227ENST00000508502 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
SEC31A-227ENST00000508502 TXNDC2Q86VQ3 553 aa12.36□□□□□ -0.43
SEC31A-227ENST00000508502 SMC5Q8IY18 1101 aa12.36□□□□□ -0.43
SEC31A-227ENST00000508502 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
SEC31A-227ENST00000508502 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
SEC31A-227ENST00000508502 SPATA31D1Q6ZQQ2 1576 aa12.35□□□□□ -0.43
SEC31A-227ENST00000508502 DIP2BQ9P265 1576 aa12.35□□□□□ -0.43
SEC31A-227ENST00000508502 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
SEC31A-227ENST00000508502 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
SEC31A-227ENST00000508502 MFAP1P55081 439 aaKnown RBP12.34□□□□□ -0.43
SEC31A-227ENST00000508502 TBC1D2Q9BYX2 928 aa12.34□□□□□ -0.43
SEC31A-227ENST00000508502 MAP2P11137 1827 aaKnown RBP12.34□□□□□ -0.43
SEC31A-227ENST00000508502 METP08581 1390 aa12.34□□□□□ -0.43
SEC31A-227ENST00000508502 IL13P35225 146 aa12.34□□□□□ -0.43
SEC31A-227ENST00000508502 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
SEC31A-227ENST00000508502 RIMBP3CA6NJZ7 1639 aa12.34□□□□□ -0.43
SEC31A-227ENST00000508502 RIMBP3BA6NNM3 1639 aa12.34□□□□□ -0.43
SEC31A-227ENST00000508502 RIMBP3Q9UFD9 1639 aa12.34□□□□□ -0.43
SEC31A-227ENST00000508502 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
SEC31A-227ENST00000508502 CALD1Q05682 793 aaKnown RBP12.34□□□□□ -0.43
SEC31A-227ENST00000508502 NUDT16Q96DE0 195 aaKnown RBP12.34□□□□□ -0.43
SEC31A-227ENST00000508502 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
SEC31A-227ENST00000508502 ZNF428Q96B54 188 aa12.33□□□□□ -0.44
SEC31A-227ENST00000508502 ELL2O00472 640 aaPredicted RBP12.33□□□□□ -0.44
SEC31A-227ENST00000508502 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.33□□□□□ -0.44
SEC31A-227ENST00000508502 VAMP4O75379 141 aa12.33□□□□□ -0.44
SEC31A-227ENST00000508502 TSPYL6Q8N831 410 aa12.33□□□□□ -0.44
SEC31A-227ENST00000508502 COG3Q96JB2 828 aa12.33□□□□□ -0.44
SEC31A-227ENST00000508502 C22orf23Q9BZE7 217 aa12.33□□□□□ -0.44
SEC31A-227ENST00000508502 GNAI1P63096 354 aa12.32□□□□□ -0.44
SEC31A-227ENST00000508502 RRS1Q15050 365 aaKnown RBP12.32□□□□□ -0.44
SEC31A-227ENST00000508502 ESF1Q9H501 851 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms