RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 NGDNQ8NEJ9 315 aaKnown RBP26.47■■□□□ 1.83
CLDND1-217ENST00000508071 WASLO00401 505 aaPredicted RBP26.46■■□□□ 1.83
CLDND1-217ENST00000508071 KDM2AQ9Y2K7 1162 aa26.46■■□□□ 1.83
CLDND1-217ENST00000508071 PSDA5PKW4 1024 aaPredicted RBP26.45■■□□□ 1.82
CLDND1-217ENST00000508071 PAK3O75914 559 aaPredicted RBP26.45■■□□□ 1.82
CLDND1-217ENST00000508071 RGPD1P0DJD0 1748 aa26.45■■□□□ 1.82
CLDND1-217ENST00000508071 RAB3GAP2Q9H2M9 1393 aa26.45■■□□□ 1.82
CLDND1-217ENST00000508071 SPATA31A5Q5VU36 1347 aa26.44■■□□□ 1.82
CLDND1-217ENST00000508071 SPATA31A7Q8IWB4 1347 aa26.44■■□□□ 1.82
CLDND1-217ENST00000508071 DCAF11Q8TEB1 546 aa26.43■■□□□ 1.82
CLDND1-217ENST00000508071 CRYBG1Q9Y4K1 1723 aa26.42■■□□□ 1.82
CLDND1-217ENST00000508071 PRDM11Q9NQV5 511 aa26.42■■□□□ 1.82
CLDND1-217ENST00000508071 ITSN1Q15811 1721 aa26.4■■□□□ 1.82
CLDND1-217ENST00000508071 HRCP23327 699 aa26.4■■□□□ 1.82
CLDND1-217ENST00000508071 EN1Q05925 392 aaPredicted RBP26.4■■□□□ 1.82
CLDND1-217ENST00000508071 FAM182BQ5T319 152 aa26.4■■□□□ 1.82
CLDND1-217ENST00000508071 THSD7AQ9UPZ6 1657 aa26.39■■□□□ 1.82
CLDND1-217ENST00000508071 STAC3Q96MF2 364 aa26.39■■□□□ 1.82
CLDND1-217ENST00000508071 ARHGEF28Q8N1W1 1705 aaKnown RBP26.35■■□□□ 1.81
CLDND1-217ENST00000508071 NUDT16Q96DE0 195 aaKnown RBP26.35■■□□□ 1.81
CLDND1-217ENST00000508071 KIAA0232Q92628 1395 aa26.34■■□□□ 1.81
CLDND1-217ENST00000508071 TNS1Q9HBL0 1735 aaKnown RBP26.34■■□□□ 1.81
CLDND1-217ENST00000508071 DISP2A7MBM2 1401 aa26.33■■□□□ 1.81
CLDND1-217ENST00000508071 ATP7BP35670 1465 aa26.33■■□□□ 1.81
CLDND1-217ENST00000508071 SPATA31A1Q5TZJ5 1347 aa26.33■■□□□ 1.81
CLDND1-217ENST00000508071 R3HDM1Q15032 1099 aaKnown RBP26.32■■□□□ 1.8
CLDND1-217ENST00000508071 CHRNA2Q15822 529 aa26.32■■□□□ 1.8
CLDND1-217ENST00000508071 PHRF1Q9P1Y6 1649 aaKnown RBP26.32■■□□□ 1.8
CLDND1-217ENST00000508071 STRN4Q9NRL3 753 aa26.31■■□□□ 1.8
CLDND1-217ENST00000508071 ZC3H6P61129 1189 aaKnown RBP26.29■■□□□ 1.8
CLDND1-217ENST00000508071 NUTM2GQ5VZR2 741 aa26.29■■□□□ 1.8
CLDND1-217ENST00000508071 FAM196AQ6ZSG2 479 aa26.29■■□□□ 1.8
CLDND1-217ENST00000508071 EZH2Q15910 746 aaKnown RBP26.28■■□□□ 1.8
CLDND1-217ENST00000508071 CDK19Q9BWU1 502 aa26.28■■□□□ 1.8
CLDND1-217ENST00000508071 TRIM37O94972 964 aa26.27■■□□□ 1.8
CLDND1-217ENST00000508071 EVA1CP58658 441 aa26.25■■□□□ 1.79
CLDND1-217ENST00000508071 USP35Q9P2H5 1018 aa26.25■■□□□ 1.79
CLDND1-217ENST00000508071 POLR3AO14802 1390 aaPredicted RBP26.24■■□□□ 1.79
CLDND1-217ENST00000508071 ACEP12821 1306 aa26.24■■□□□ 1.79
CLDND1-217ENST00000508071 CAMKK2Q96RR4 588 aa26.24■■□□□ 1.79
CLDND1-217ENST00000508071 TOPAZ1Q8N9V7 1692 aa26.24■■□□□ 1.79
CLDND1-217ENST00000508071 NBPF8Q3BBV2 869 aa26.23■■□□□ 1.79
CLDND1-217ENST00000508071 CCDC61Q9Y6R9 512 aa26.23■■□□□ 1.79
CLDND1-217ENST00000508071 APBA3O96018 575 aa26.22■■□□□ 1.79
CLDND1-217ENST00000508071 SSH2Q76I76 1423 aa26.22■■□□□ 1.79
CLDND1-217ENST00000508071 PARD3Q8TEW0 1356 aa26.21■■□□□ 1.79
CLDND1-217ENST00000508071 PDE3BQ13370 1112 aa26.21■■□□□ 1.79
CLDND1-217ENST00000508071 BARGINQ6ZT62 677 aa26.21■■□□□ 1.79
CLDND1-217ENST00000508071 ABTB2Q8N961 1025 aa26.2■■□□□ 1.78
CLDND1-217ENST00000508071 PLEKHG3A1L390 1219 aa26.19■■□□□ 1.78
CLDND1-217ENST00000508071 NRKQ7Z2Y5 1582 aa26.19■■□□□ 1.78
CLDND1-217ENST00000508071 KIAA1210Q9ULL0 1709 aa26.17■■□□□ 1.78
CLDND1-217ENST00000508071 LARP1Q6PKG0 1096 aaKnown RBP26.17■■□□□ 1.78
CLDND1-217ENST00000508071 TCP11L2Q8N4U5 519 aa26.17■■□□□ 1.78
CLDND1-217ENST00000508071 CAMTA1Q9Y6Y1 1673 aa26.17■■□□□ 1.78
CLDND1-217ENST00000508071 CPDO75976 1380 aa26.16■■□□□ 1.78
CLDND1-217ENST00000508071 RREB1Q92766 1687 aa26.15■■□□□ 1.78
CLDND1-217ENST00000508071 LMO7Q8WWI1 1683 aa26.14■■□□□ 1.78
CLDND1-217ENST00000508071 USP19O94966 1318 aa26.14■■□□□ 1.77
CLDND1-217ENST00000508071 NBPF14Q5TI25 921 aa26.12■■□□□ 1.77
CLDND1-217ENST00000508071 NLRP13Q86W25 1043 aa26.12■■□□□ 1.77
CLDND1-217ENST00000508071 THRAP3Q9Y2W1 955 aaKnown RBP26.12■■□□□ 1.77
CLDND1-217ENST00000508071 NUP188Q5SRE5 1749 aa26.11■■□□□ 1.77
CLDND1-217ENST00000508071 SRPK2P78362 688 aaKnown RBP26.11■■□□□ 1.77
CLDND1-217ENST00000508071 GCP02774 474 aa26.1■■□□□ 1.77
CLDND1-217ENST00000508071 PPIP5K1Q6PFW1 1433 aa26.1■■□□□ 1.77
CLDND1-217ENST00000508071 NBPF1Q3BBV0 1214 aa26.09■■□□□ 1.77
CLDND1-217ENST00000508071 PARP4Q9UKK3 1724 aaKnown RBP26.08■■□□□ 1.76
CLDND1-217ENST00000508071 COL5A2P05997 1499 aaPredicted RBP26.06■■□□□ 1.76
CLDND1-217ENST00000508071 C11orf95C9JLR9 678 aaPredicted RBP26.06■■□□□ 1.76
CLDND1-217ENST00000508071 CABP2Q9NPB3 220 aa26.06■■□□□ 1.76
CLDND1-217ENST00000508071 CENPJQ9HC77 1338 aaPredicted RBP26.06■■□□□ 1.76
CLDND1-217ENST00000508071 BRD4O60885 1362 aaPredicted RBP26.06■■□□□ 1.76
CLDND1-217ENST00000508071 ZBTB7CA1YPR0 619 aa26.04■■□□□ 1.76
CLDND1-217ENST00000508071 CRB1P82279 1406 aa26.03■■□□□ 1.76
CLDND1-217ENST00000508071 QRICH2Q9H0J4 1663 aa26.01■■□□□ 1.75
CLDND1-217ENST00000508071 OVOS2A0A0G2JMS6 1433 aa26■■□□□ 1.75
CLDND1-217ENST00000508071 OVOS2A0A0J9YW53 1432 aa26■■□□□ 1.75
CLDND1-217ENST00000508071 OVOS2Q6IE36 1432 aa26■■□□□ 1.75
CLDND1-217ENST00000508071 NLRP6P59044 892 aa26■■□□□ 1.75
CLDND1-217ENST00000508071 CABP1Q9NZU7 370 aa25.99■■□□□ 1.75
CLDND1-217ENST00000508071 PPP1R1BQ9UD71 204 aaPredicted RBP25.99■■□□□ 1.75
CLDND1-217ENST00000508071 USP6P35125 1406 aa25.98■■□□□ 1.75
CLDND1-217ENST00000508071 AATKQ6ZMQ8 1374 aa25.98■■□□□ 1.75
CLDND1-217ENST00000508071 SPON1Q9HCB6 807 aa25.98■■□□□ 1.75
CLDND1-217ENST00000508071 PEAK1Q9H792 1746 aa25.97■■□□□ 1.75
CLDND1-217ENST00000508071 SBF2Q86WG5 1849 aa25.96■■□□□ 1.75
CLDND1-217ENST00000508071 DDB1Q16531 1140 aa25.96■■□□□ 1.75
CLDND1-217ENST00000508071 TOM1L2Q6ZVM7 507 aa25.96■■□□□ 1.75
CLDND1-217ENST00000508071 SLIT3O75094 1523 aa25.96■■□□□ 1.75
CLDND1-217ENST00000508071 LRRC37A3O60309 1634 aa25.96■■□□□ 1.75
CLDND1-217ENST00000508071 RGPD3A6NKT7 1758 aaPredicted RBP25.95■■□□□ 1.75
CLDND1-217ENST00000508071 RGPD4Q7Z3J3 1758 aa25.95■■□□□ 1.75
CLDND1-217ENST00000508071 KCNQ2O43526 872 aa25.95■■□□□ 1.74
CLDND1-217ENST00000508071 PLSCR1O15162 318 aa25.93■■□□□ 1.74
CLDND1-217ENST00000508071 YY1P25490 414 aa25.93■■□□□ 1.74
CLDND1-217ENST00000508071 PIK3C2AO00443 1686 aa25.92■■□□□ 1.74
CLDND1-217ENST00000508071 COL18A1P39060 1754 aa25.92■■□□□ 1.74
CLDND1-217ENST00000508071 WNK3Q9BYP7 1800 aa25.91■■□□□ 1.74
CLDND1-217ENST00000508071 DCAF8L1A6NGE4 600 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms