RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 WASHC2AQ641Q2 1341 aa18.71■□□□□ 0.59
UBE2D3-221ENST00000507845 NPHP3Q7Z494 1330 aa18.71■□□□□ 0.59
UBE2D3-221ENST00000507845 CPSF1Q10570 1443 aaKnown RBP18.7■□□□□ 0.58
UBE2D3-221ENST00000507845 NRKQ7Z2Y5 1582 aa18.68■□□□□ 0.58
UBE2D3-221ENST00000507845 SOS2Q07890 1332 aaPredicted RBP18.68■□□□□ 0.58
UBE2D3-221ENST00000507845 XPCQ01831 940 aaPredicted RBP18.67■□□□□ 0.58
UBE2D3-221ENST00000507845 PSME1Q06323 249 aa18.67■□□□□ 0.58
UBE2D3-221ENST00000507845 KRT28Q7Z3Y7 464 aa18.67■□□□□ 0.58
UBE2D3-221ENST00000507845 A0A1W2PP64 1363 aa18.67■□□□□ 0.58
UBE2D3-221ENST00000507845 USP6P35125 1406 aa18.66■□□□□ 0.58
UBE2D3-221ENST00000507845 TERF2IPQ9NYB0 399 aa18.66■□□□□ 0.58
UBE2D3-221ENST00000507845 ALS2Q96Q42 1657 aa18.66■□□□□ 0.58
UBE2D3-221ENST00000507845 ANKRD36BQ8N2N9 1353 aa18.66■□□□□ 0.58
UBE2D3-221ENST00000507845 HSPA1LP34931 641 aa18.65■□□□□ 0.58
UBE2D3-221ENST00000507845 ZNF692Q9BU19 519 aaPredicted RBP18.65■□□□□ 0.58
UBE2D3-221ENST00000507845 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
UBE2D3-221ENST00000507845 KTN1Q86UP2 1357 aaKnown RBP18.65■□□□□ 0.58
UBE2D3-221ENST00000507845 HDGFL2Q7Z4V5 671 aaPredicted RBP18.64■□□□□ 0.57
UBE2D3-221ENST00000507845 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
UBE2D3-221ENST00000507845 SSH2Q76I76 1423 aa18.64■□□□□ 0.57
UBE2D3-221ENST00000507845 BRD4O60885 1362 aaPredicted RBP18.63■□□□□ 0.57
UBE2D3-221ENST00000507845 SHPRHQ149N8 1683 aa18.61■□□□□ 0.57
UBE2D3-221ENST00000507845 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
UBE2D3-221ENST00000507845 EDC4Q6P2E9 1401 aaKnown RBP18.61■□□□□ 0.57
UBE2D3-221ENST00000507845 ZNF316A6NFI3 1004 aaPredicted RBP18.61■□□□□ 0.57
UBE2D3-221ENST00000507845 PIK3C2AO00443 1686 aa18.6■□□□□ 0.57
UBE2D3-221ENST00000507845 SPATA31A3Q5VYP0 1347 aa18.6■□□□□ 0.57
UBE2D3-221ENST00000507845 TTC21BQ7Z4L5 1316 aa18.59■□□□□ 0.57
UBE2D3-221ENST00000507845 KIF20BQ96Q89 1820 aa18.59■□□□□ 0.57
UBE2D3-221ENST00000507845 LRRC59Q96AG4 307 aaKnown RBP18.59■□□□□ 0.57
UBE2D3-221ENST00000507845 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
UBE2D3-221ENST00000507845 PANK3Q9H999 370 aa18.59■□□□□ 0.57
UBE2D3-221ENST00000507845 COL22A1Q8NFW1 1626 aaPredicted RBP18.59■□□□□ 0.57
UBE2D3-221ENST00000507845 PAK3O75914 559 aaPredicted RBP18.58■□□□□ 0.56
UBE2D3-221ENST00000507845 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
UBE2D3-221ENST00000507845 MARF1Q9Y4F3 1742 aaKnown RBP18.57■□□□□ 0.56
UBE2D3-221ENST00000507845 CAPN15O75808 1086 aa18.57■□□□□ 0.56
UBE2D3-221ENST00000507845 CRYBG1Q9Y4K1 1723 aa18.57■□□□□ 0.56
UBE2D3-221ENST00000507845 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
UBE2D3-221ENST00000507845 PNPLA6Q8IY17 1366 aa18.56■□□□□ 0.56
UBE2D3-221ENST00000507845 TTC21AQ8NDW8 1320 aa18.56■□□□□ 0.56
UBE2D3-221ENST00000507845 ABCA3Q99758 1704 aa18.56■□□□□ 0.56
UBE2D3-221ENST00000507845 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
UBE2D3-221ENST00000507845 JCADQ9P266 1359 aa18.55■□□□□ 0.56
UBE2D3-221ENST00000507845 ILDR1Q86SU0 546 aaPredicted RBP18.55■□□□□ 0.56
UBE2D3-221ENST00000507845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.55■□□□□ 0.56
UBE2D3-221ENST00000507845 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
UBE2D3-221ENST00000507845 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
UBE2D3-221ENST00000507845 ABTB2Q8N961 1025 aa18.53■□□□□ 0.56
UBE2D3-221ENST00000507845 FOXD4L1Q9NU39 408 aa18.53■□□□□ 0.56
UBE2D3-221ENST00000507845 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.56
UBE2D3-221ENST00000507845 ANKRD26Q9UPS8 1709 aa18.52■□□□□ 0.56
UBE2D3-221ENST00000507845 NME9Q86XW9 330 aa18.52■□□□□ 0.56
UBE2D3-221ENST00000507845 NUTM2GQ5VZR2 741 aa18.51■□□□□ 0.55
UBE2D3-221ENST00000507845 USP31Q70CQ4 1352 aa18.51■□□□□ 0.55
UBE2D3-221ENST00000507845 PER1O15534 1290 aaPredicted RBP18.5■□□□□ 0.55
UBE2D3-221ENST00000507845 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
UBE2D3-221ENST00000507845 ZRANB1Q9UGI0 708 aa18.5■□□□□ 0.55
UBE2D3-221ENST00000507845 FYB1O15117 783 aa18.49■□□□□ 0.55
UBE2D3-221ENST00000507845 MYCNP04198 464 aaPredicted RBP18.49■□□□□ 0.55
UBE2D3-221ENST00000507845 NLRP6P59044 892 aa18.49■□□□□ 0.55
UBE2D3-221ENST00000507845 SLIT3O75094 1523 aa18.49■□□□□ 0.55
UBE2D3-221ENST00000507845 OVOS2A0A0J9YW53 1432 aa18.49■□□□□ 0.55
UBE2D3-221ENST00000507845 OVOS2Q6IE36 1432 aa18.49■□□□□ 0.55
UBE2D3-221ENST00000507845 USP19O94966 1318 aa18.49■□□□□ 0.55
UBE2D3-221ENST00000507845 CGNL1Q0VF96 1302 aa18.49■□□□□ 0.55
UBE2D3-221ENST00000507845 NLRP13Q86W25 1043 aa18.48■□□□□ 0.55
UBE2D3-221ENST00000507845 KNSTRNQ9Y448 316 aa18.48■□□□□ 0.55
UBE2D3-221ENST00000507845 ZBTB22O15209 634 aa18.47■□□□□ 0.55
UBE2D3-221ENST00000507845 CABLES1Q8TDN4 633 aa18.47■□□□□ 0.55
UBE2D3-221ENST00000507845 SPATA31A6Q5VVP1 1343 aa18.47■□□□□ 0.55
UBE2D3-221ENST00000507845 PLEKHG5O94827 1062 aa18.46■□□□□ 0.55
UBE2D3-221ENST00000507845 AMER1Q5JTC6 1135 aaPredicted RBP18.46■□□□□ 0.55
UBE2D3-221ENST00000507845 GGNBP2Q9H3C7 697 aa18.46■□□□□ 0.55
UBE2D3-221ENST00000507845 NSD2O96028 1365 aa18.44■□□□□ 0.54
UBE2D3-221ENST00000507845 LRP6O75581 1613 aa18.44■□□□□ 0.54
UBE2D3-221ENST00000507845 NFAT5O94916 1531 aa18.44■□□□□ 0.54
UBE2D3-221ENST00000507845 NPC1L1Q9UHC9 1359 aa18.43■□□□□ 0.54
UBE2D3-221ENST00000507845 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
UBE2D3-221ENST00000507845 COG3Q96JB2 828 aa18.43■□□□□ 0.54
UBE2D3-221ENST00000507845 NUTM2BA6NNL0 878 aaPredicted RBP18.42■□□□□ 0.54
UBE2D3-221ENST00000507845 NUTM2EB1AL46 878 aaPredicted RBP18.42■□□□□ 0.54
UBE2D3-221ENST00000507845 NUTM2AQ8IVF1 878 aaPredicted RBP18.42■□□□□ 0.54
UBE2D3-221ENST00000507845 LTN1O94822 1766 aa18.41■□□□□ 0.54
UBE2D3-221ENST00000507845 GCP02774 474 aa18.41■□□□□ 0.54
UBE2D3-221ENST00000507845 MAP2P11137 1827 aaKnown RBP18.4■□□□□ 0.54
UBE2D3-221ENST00000507845 HAP1P54257 671 aaPredicted RBP18.4■□□□□ 0.54
UBE2D3-221ENST00000507845 KCNH5Q8NCM2 988 aa18.39■□□□□ 0.53
UBE2D3-221ENST00000507845 CC2D1BQ5T0F9 858 aaKnown RBP18.38■□□□□ 0.53
UBE2D3-221ENST00000507845 SOX12O15370 315 aa18.37■□□□□ 0.53
UBE2D3-221ENST00000507845 ADAMTS2O95450 1211 aa18.37■□□□□ 0.53
UBE2D3-221ENST00000507845 CPDO75976 1380 aa18.37■□□□□ 0.53
UBE2D3-221ENST00000507845 COL18A1P39060 1754 aa18.37■□□□□ 0.53
UBE2D3-221ENST00000507845 COL14A1Q05707 1796 aaKnown RBP18.37■□□□□ 0.53
UBE2D3-221ENST00000507845 ZC3H6P61129 1189 aaKnown RBP18.36■□□□□ 0.53
UBE2D3-221ENST00000507845 PLCH1Q4KWH8 1693 aa18.36■□□□□ 0.53
UBE2D3-221ENST00000507845 MORC1Q86VD1 984 aa18.36■□□□□ 0.53
UBE2D3-221ENST00000507845 KIAA0232Q92628 1395 aa18.36■□□□□ 0.53
UBE2D3-221ENST00000507845 RGPD5Q99666 1765 aa18.35■□□□□ 0.53
UBE2D3-221ENST00000507845 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms