RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 EID1Q9Y6B2 187 aa23.15■■□□□ 1.3
SFXN1-208ENST00000507823 ITSN1Q15811 1721 aa23.15■■□□□ 1.3
SFXN1-208ENST00000507823 TBX22Q9Y458 520 aa23.14■■□□□ 1.29
SFXN1-208ENST00000507823 PTCH1Q13635 1447 aa23.14■■□□□ 1.29
SFXN1-208ENST00000507823 PLEKHF1Q96S99 279 aa23.12■■□□□ 1.29
SFXN1-208ENST00000507823 THEMISQ8N1K5 641 aaPredicted RBP23.12■■□□□ 1.29
SFXN1-208ENST00000507823 AATKQ6ZMQ8 1374 aa23.11■■□□□ 1.29
SFXN1-208ENST00000507823 PRR36Q9H6K5 1346 aa23.11■■□□□ 1.29
SFXN1-208ENST00000507823 PLIN1O60240 522 aa23.11■■□□□ 1.29
SFXN1-208ENST00000507823 TRHP20396 242 aaPredicted RBP23.11■■□□□ 1.29
SFXN1-208ENST00000507823 U2AF1L5P0DN76 240 aaPredicted RBP23.11■■□□□ 1.29
SFXN1-208ENST00000507823 U2AF1Q01081 240 aaKnown RBP eCLIP23.11■■□□□ 1.29
SFXN1-208ENST00000507823 NRKQ7Z2Y5 1582 aa23.1■■□□□ 1.29
SFXN1-208ENST00000507823 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.1■■□□□ 1.29
SFXN1-208ENST00000507823 XRN1Q8IZH2 1706 aaKnown RBP23.09■■□□□ 1.29
SFXN1-208ENST00000507823 ZNF692Q9BU19 519 aaPredicted RBP23.09■■□□□ 1.29
SFXN1-208ENST00000507823 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.29
SFXN1-208ENST00000507823 CEP170BQ9Y4F5 1589 aaPredicted RBP23.08■■□□□ 1.29
SFXN1-208ENST00000507823 CRBNQ96SW2 442 aa23.08■■□□□ 1.28
SFXN1-208ENST00000507823 POLKQ9UBT6 870 aa23.07■■□□□ 1.28
SFXN1-208ENST00000507823 CDK12Q9NYV4 1490 aaPredicted RBP23.06■■□□□ 1.28
SFXN1-208ENST00000507823 DIAPH1O60610 1272 aaKnown RBP23.06■■□□□ 1.28
SFXN1-208ENST00000507823 PLEKHG3A1L390 1219 aa23.06■■□□□ 1.28
SFXN1-208ENST00000507823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.05■■□□□ 1.28
SFXN1-208ENST00000507823 ZNF142P52746 1687 aaPredicted RBP23.05■■□□□ 1.28
SFXN1-208ENST00000507823 C20orf194Q5TEA3 1177 aa23.04■■□□□ 1.28
SFXN1-208ENST00000507823 PIK3R4Q99570 1358 aa23.04■■□□□ 1.28
SFXN1-208ENST00000507823 ADAMTSL3P82987 1691 aa23.04■■□□□ 1.28
SFXN1-208ENST00000507823 RIMS1Q86UR5 1692 aaKnown RBP23.04■■□□□ 1.28
SFXN1-208ENST00000507823 RRP7AQ9Y3A4 280 aaKnown RBP23.04■■□□□ 1.28
SFXN1-208ENST00000507823 SLC26A8Q96RN1 970 aa23.03■■□□□ 1.28
SFXN1-208ENST00000507823 PNNQ9H307 717 aaKnown RBP23.03■■□□□ 1.28
SFXN1-208ENST00000507823 NCKAP5LQ9HCH0 1330 aa23.02■■□□□ 1.28
SFXN1-208ENST00000507823 AMOTL2Q9Y2J4 779 aa23.02■■□□□ 1.28
SFXN1-208ENST00000507823 NME9Q86XW9 330 aa23.01■■□□□ 1.27
SFXN1-208ENST00000507823 TMPOP42166 694 aaKnown RBP23■■□□□ 1.27
SFXN1-208ENST00000507823 LRRC7Q96NW7 1537 aa23■■□□□ 1.27
SFXN1-208ENST00000507823 U2SURPO15042 1029 aaKnown RBP23■■□□□ 1.27
SFXN1-208ENST00000507823 FCHSD2O94868 740 aa23■■□□□ 1.27
SFXN1-208ENST00000507823 SSH2Q76I76 1423 aa23■■□□□ 1.27
SFXN1-208ENST00000507823 NALCNQ8IZF0 1738 aa22.99■■□□□ 1.27
SFXN1-208ENST00000507823 IL16Q14005 1332 aa22.99■■□□□ 1.27
SFXN1-208ENST00000507823 NEUROD2Q15784 382 aa22.99■■□□□ 1.27
SFXN1-208ENST00000507823 USP6P35125 1406 aa22.98■■□□□ 1.27
SFXN1-208ENST00000507823 MYH16Q9H6N6 1097 aa22.98■■□□□ 1.27
SFXN1-208ENST00000507823 OVOS2A0A0J9YW53 1432 aa22.98■■□□□ 1.27
SFXN1-208ENST00000507823 OVOS2Q6IE36 1432 aa22.98■■□□□ 1.27
SFXN1-208ENST00000507823 TRIM35Q9UPQ4 493 aa22.97■■□□□ 1.27
SFXN1-208ENST00000507823 BCAR3O75815 825 aa22.97■■□□□ 1.27
SFXN1-208ENST00000507823 COG3Q96JB2 828 aa22.97■■□□□ 1.27
SFXN1-208ENST00000507823 PDE3AQ14432 1141 aa22.96■■□□□ 1.27
SFXN1-208ENST00000507823 FANCIQ9NVI1 1328 aa22.96■■□□□ 1.27
SFXN1-208ENST00000507823 RSPH6AQ9H0K4 717 aa22.96■■□□□ 1.27
SFXN1-208ENST00000507823 TTC21BQ7Z4L5 1316 aa22.96■■□□□ 1.27
SFXN1-208ENST00000507823 MAPK8IP3Q9UPT6 1336 aa22.96■■□□□ 1.27
SFXN1-208ENST00000507823 CT47B1P0C2W7 299 aaPredicted RBP22.95■■□□□ 1.27
SFXN1-208ENST00000507823 ACEP12821 1306 aa22.95■■□□□ 1.26
SFXN1-208ENST00000507823 IL13P35225 146 aa22.95■■□□□ 1.26
SFXN1-208ENST00000507823 ZRANB1Q9UGI0 708 aa22.95■■□□□ 1.26
SFXN1-208ENST00000507823 KDM2BQ8NHM5 1336 aa22.94■■□□□ 1.26
SFXN1-208ENST00000507823 RARSP54136 660 aaKnown RBP22.94■■□□□ 1.26
SFXN1-208ENST00000507823 ANKARQ7Z5J8 1434 aa22.94■■□□□ 1.26
SFXN1-208ENST00000507823 EMILIN1Q9Y6C2 1016 aa22.93■■□□□ 1.26
SFXN1-208ENST00000507823 SETD1BQ9UPS6 1966 aaKnown RBP22.93■■□□□ 1.26
SFXN1-208ENST00000507823 USP31Q70CQ4 1352 aa22.92■■□□□ 1.26
SFXN1-208ENST00000507823 FBLN1P23142 703 aa22.92■■□□□ 1.26
SFXN1-208ENST00000507823 CHD2O14647 1828 aaKnown RBP22.91■■□□□ 1.26
SFXN1-208ENST00000507823 FMN2Q9NZ56 1722 aa22.9■■□□□ 1.26
SFXN1-208ENST00000507823 TCERG1O14776 1098 aaKnown RBP22.9■■□□□ 1.26
SFXN1-208ENST00000507823 TTC21AQ8NDW8 1320 aa22.89■■□□□ 1.26
SFXN1-208ENST00000507823 RGPD8O14715 1765 aaPredicted RBP22.88■■□□□ 1.25
SFXN1-208ENST00000507823 PLPPR3Q6T4P5 718 aa22.88■■□□□ 1.25
SFXN1-208ENST00000507823 RIPK4P57078 832 aa22.87■■□□□ 1.25
SFXN1-208ENST00000507823 CENPQQ7L2Z9 268 aaPredicted RBP22.87■■□□□ 1.25
SFXN1-208ENST00000507823 MS4A1P11836 297 aa22.87■■□□□ 1.25
SFXN1-208ENST00000507823 PRKAR2BP31323 418 aa22.87■■□□□ 1.25
SFXN1-208ENST00000507823 USP54Q70EL1 1684 aa22.87■■□□□ 1.25
SFXN1-208ENST00000507823 PPM1GO15355 546 aaPredicted RBP22.85■■□□□ 1.25
SFXN1-208ENST00000507823 KCNA6P17658 529 aa22.85■■□□□ 1.25
SFXN1-208ENST00000507823 AAMPQ13685 434 aa22.85■■□□□ 1.25
SFXN1-208ENST00000507823 NFE2L2Q16236 605 aa22.84■■□□□ 1.25
SFXN1-208ENST00000507823 RGPD1P0DJD0 1748 aa22.84■■□□□ 1.25
SFXN1-208ENST00000507823 PEAK1Q9H792 1746 aa22.84■■□□□ 1.25
SFXN1-208ENST00000507823 ANKLE2Q86XL3 938 aa22.84■■□□□ 1.25
SFXN1-208ENST00000507823 RRS1Q15050 365 aaKnown RBP22.83■■□□□ 1.25
SFXN1-208ENST00000507823 PIK3C2AO00443 1686 aa22.81■■□□□ 1.24
SFXN1-208ENST00000507823 NEFMP07197 916 aa22.8■■□□□ 1.24
SFXN1-208ENST00000507823 PHACTR3Q96KR7 559 aa22.8■■□□□ 1.24
SFXN1-208ENST00000507823 TSR2Q969E8 191 aaKnown RBP22.79■■□□□ 1.24
SFXN1-208ENST00000507823 DLG5Q8TDM6 1919 aa22.79■■□□□ 1.24
SFXN1-208ENST00000507823 NUTM2FA1L443 756 aa22.79■■□□□ 1.24
SFXN1-208ENST00000507823 EXOSC9Q06265 439 aaKnown RBP22.78■■□□□ 1.24
SFXN1-208ENST00000507823 MARF1Q9Y4F3 1742 aaKnown RBP22.78■■□□□ 1.24
SFXN1-208ENST00000507823 HMOX1P09601 288 aa22.78■■□□□ 1.24
SFXN1-208ENST00000507823 CALD1Q05682 793 aaKnown RBP22.77■■□□□ 1.23
SFXN1-208ENST00000507823 PANK1Q8TE04 598 aa22.77■■□□□ 1.23
SFXN1-208ENST00000507823 CANXP27824 592 aaKnown RBP22.76■■□□□ 1.23
SFXN1-208ENST00000507823 EIF4A2Q14240 407 aaKnown RBP22.76■■□□□ 1.23
SFXN1-208ENST00000507823 CLUAP1Q96AJ1 413 aa22.76■■□□□ 1.23
SFXN1-208ENST00000507823 PMFBP1Q8TBY8 1022 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms