RNA–Protein interactions for RNA: ENST00000507528.5

PDCD6-206, Transcript of programmed cell death 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDCD6, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-206ENST00000507528 TRAK1Q9UPV9 953 aa28.17■■■□□ 2.1
PDCD6-206ENST00000507528 THSD7AQ9UPZ6 1657 aa28.16■■■□□ 2.1
PDCD6-206ENST00000507528 SPATA31A5Q5VU36 1347 aa28.14■■■□□ 2.09
PDCD6-206ENST00000507528 SPATA31A7Q8IWB4 1347 aa28.14■■■□□ 2.09
PDCD6-206ENST00000507528 MINK1Q8N4C8 1332 aaPredicted RBP28.14■■■□□ 2.09
PDCD6-206ENST00000507528 TNS1Q9HBL0 1735 aaKnown RBP28.12■■■□□ 2.09
PDCD6-206ENST00000507528 WASLO00401 505 aaPredicted RBP28.12■■■□□ 2.09
PDCD6-206ENST00000507528 PSDA5PKW4 1024 aaPredicted RBP28.11■■■□□ 2.09
PDCD6-206ENST00000507528 HRCP23327 699 aa28.11■■■□□ 2.09
PDCD6-206ENST00000507528 ITSN1Q15811 1721 aa28.11■■■□□ 2.09
PDCD6-206ENST00000507528 DISP2A7MBM2 1401 aa28.09■■■□□ 2.09
PDCD6-206ENST00000507528 EN1Q05925 392 aaPredicted RBP28.08■■■□□ 2.09
PDCD6-206ENST00000507528 ARHGEF28Q8N1W1 1705 aaKnown RBP28.08■■■□□ 2.09
PDCD6-206ENST00000507528 RAB3GAP2Q9H2M9 1393 aa28.08■■■□□ 2.09
PDCD6-206ENST00000507528 FAM182BQ5T319 152 aa28.07■■■□□ 2.08
PDCD6-206ENST00000507528 NGDNQ8NEJ9 315 aaKnown RBP28.07■■■□□ 2.08
PDCD6-206ENST00000507528 PHRF1Q9P1Y6 1649 aaKnown RBP28.07■■■□□ 2.08
PDCD6-206ENST00000507528 ATP7BP35670 1465 aa28.05■■■□□ 2.08
PDCD6-206ENST00000507528 PRDM11Q9NQV5 511 aa28.05■■■□□ 2.08
PDCD6-206ENST00000507528 PAK3O75914 559 aaPredicted RBP28.04■■■□□ 2.08
PDCD6-206ENST00000507528 DCAF11Q8TEB1 546 aa28.04■■■□□ 2.08
PDCD6-206ENST00000507528 STAC3Q96MF2 364 aa28.03■■■□□ 2.08
PDCD6-206ENST00000507528 KDM2AQ9Y2K7 1162 aa28.03■■■□□ 2.08
PDCD6-206ENST00000507528 SPATA31A1Q5TZJ5 1347 aa28.02■■■□□ 2.08
PDCD6-206ENST00000507528 KIAA0232Q92628 1395 aa28.01■■■□□ 2.07
PDCD6-206ENST00000507528 NUDT16Q96DE0 195 aaKnown RBP27.99■■■□□ 2.07
PDCD6-206ENST00000507528 TOPAZ1Q8N9V7 1692 aa27.98■■■□□ 2.07
PDCD6-206ENST00000507528 R3HDM1Q15032 1099 aaKnown RBP27.98■■■□□ 2.07
PDCD6-206ENST00000507528 CHRNA2Q15822 529 aa27.96■■■□□ 2.07
PDCD6-206ENST00000507528 EZH2Q15910 746 aaKnown RBP27.96■■■□□ 2.07
PDCD6-206ENST00000507528 FAM196AQ6ZSG2 479 aa27.95■■■□□ 2.06
PDCD6-206ENST00000507528 CAMKK2Q96RR4 588 aa27.95■■■□□ 2.06
PDCD6-206ENST00000507528 POLR3AO14802 1390 aaPredicted RBP27.94■■■□□ 2.06
PDCD6-206ENST00000507528 STRN4Q9NRL3 753 aa27.93■■■□□ 2.06
PDCD6-206ENST00000507528 RREB1Q92766 1687 aa27.92■■■□□ 2.06
PDCD6-206ENST00000507528 TRIM37O94972 964 aa27.92■■■□□ 2.06
PDCD6-206ENST00000507528 NRKQ7Z2Y5 1582 aa27.91■■■□□ 2.06
PDCD6-206ENST00000507528 ZC3H6P61129 1189 aaKnown RBP27.91■■■□□ 2.06
PDCD6-206ENST00000507528 CDK19Q9BWU1 502 aa27.91■■■□□ 2.06
PDCD6-206ENST00000507528 PARD3Q8TEW0 1356 aa27.9■■■□□ 2.06
PDCD6-206ENST00000507528 SSH2Q76I76 1423 aa27.9■■■□□ 2.06
PDCD6-206ENST00000507528 LMO7Q8WWI1 1683 aa27.89■■■□□ 2.06
PDCD6-206ENST00000507528 BARGINQ6ZT62 677 aa27.89■■■□□ 2.06
PDCD6-206ENST00000507528 ACEP12821 1306 aa27.89■■■□□ 2.05
PDCD6-206ENST00000507528 CAMTA1Q9Y6Y1 1673 aa27.88■■■□□ 2.05
PDCD6-206ENST00000507528 NBPF8Q3BBV2 869 aa27.88■■■□□ 2.05
PDCD6-206ENST00000507528 NUTM2GQ5VZR2 741 aa27.88■■■□□ 2.05
PDCD6-206ENST00000507528 KIAA1210Q9ULL0 1709 aa27.88■■■□□ 2.05
PDCD6-206ENST00000507528 CCDC61Q9Y6R9 512 aa27.87■■■□□ 2.05
PDCD6-206ENST00000507528 NUP188Q5SRE5 1749 aa27.87■■■□□ 2.05
PDCD6-206ENST00000507528 PLEKHG3A1L390 1219 aa27.86■■■□□ 2.05
PDCD6-206ENST00000507528 APBA3O96018 575 aa27.86■■■□□ 2.05
PDCD6-206ENST00000507528 USP35Q9P2H5 1018 aa27.86■■■□□ 2.05
PDCD6-206ENST00000507528 CPDO75976 1380 aa27.85■■■□□ 2.05
PDCD6-206ENST00000507528 EVA1CP58658 441 aa27.84■■■□□ 2.05
PDCD6-206ENST00000507528 USP19O94966 1318 aa27.83■■■□□ 2.05
PDCD6-206ENST00000507528 PDE3BQ13370 1112 aa27.82■■■□□ 2.04
PDCD6-206ENST00000507528 LARP1Q6PKG0 1096 aaKnown RBP27.82■■■□□ 2.04
PDCD6-206ENST00000507528 PARP4Q9UKK3 1724 aaKnown RBP27.81■■■□□ 2.04
PDCD6-206ENST00000507528 ABTB2Q8N961 1025 aa27.81■■■□□ 2.04
PDCD6-206ENST00000507528 TCP11L2Q8N4U5 519 aa27.8■■■□□ 2.04
PDCD6-206ENST00000507528 THRAP3Q9Y2W1 955 aaKnown RBP27.78■■■□□ 2.04
PDCD6-206ENST00000507528 COL5A2P05997 1499 aaPredicted RBP27.76■■■□□ 2.03
PDCD6-206ENST00000507528 GCP02774 474 aa27.74■■■□□ 2.03
PDCD6-206ENST00000507528 NLRP13Q86W25 1043 aa27.74■■■□□ 2.03
PDCD6-206ENST00000507528 PPIP5K1Q6PFW1 1433 aa27.74■■■□□ 2.03
PDCD6-206ENST00000507528 PEAK1Q9H792 1746 aa27.72■■■□□ 2.03
PDCD6-206ENST00000507528 NBPF14Q5TI25 921 aa27.72■■■□□ 2.03
PDCD6-206ENST00000507528 BRD4O60885 1362 aaPredicted RBP27.72■■■□□ 2.03
PDCD6-206ENST00000507528 RGPD3A6NKT7 1758 aaPredicted RBP27.71■■■□□ 2.03
PDCD6-206ENST00000507528 RGPD4Q7Z3J3 1758 aa27.71■■■□□ 2.03
PDCD6-206ENST00000507528 NBPF1Q3BBV0 1214 aa27.71■■■□□ 2.03
PDCD6-206ENST00000507528 SBF2Q86WG5 1849 aa27.71■■■□□ 2.03
PDCD6-206ENST00000507528 CRB1P82279 1406 aa27.69■■■□□ 2.02
PDCD6-206ENST00000507528 C11orf95C9JLR9 678 aaPredicted RBP27.69■■■□□ 2.02
PDCD6-206ENST00000507528 SRPK2P78362 688 aaKnown RBP27.68■■■□□ 2.02
PDCD6-206ENST00000507528 QRICH2Q9H0J4 1663 aa27.68■■■□□ 2.02
PDCD6-206ENST00000507528 SLIT3O75094 1523 aa27.67■■■□□ 2.02
PDCD6-206ENST00000507528 LRRC37A3O60309 1634 aa27.67■■■□□ 2.02
PDCD6-206ENST00000507528 CABP2Q9NPB3 220 aa27.66■■■□□ 2.02
PDCD6-206ENST00000507528 OVOS2A0A0G2JMS6 1433 aa27.66■■■□□ 2.02
PDCD6-206ENST00000507528 OVOS2A0A0J9YW53 1432 aa27.66■■■□□ 2.02
PDCD6-206ENST00000507528 OVOS2Q6IE36 1432 aa27.66■■■□□ 2.02
PDCD6-206ENST00000507528 CENPJQ9HC77 1338 aaPredicted RBP27.66■■■□□ 2.02
PDCD6-206ENST00000507528 COL18A1P39060 1754 aa27.65■■■□□ 2.02
PDCD6-206ENST00000507528 USP6P35125 1406 aa27.65■■■□□ 2.02
PDCD6-206ENST00000507528 AATKQ6ZMQ8 1374 aa27.64■■■□□ 2.02
PDCD6-206ENST00000507528 WNK3Q9BYP7 1800 aa27.64■■■□□ 2.01
PDCD6-206ENST00000507528 PIK3C2AO00443 1686 aa27.62■■■□□ 2.01
PDCD6-206ENST00000507528 SPON1Q9HCB6 807 aa27.62■■■□□ 2.01
PDCD6-206ENST00000507528 PLSCR1O15162 318 aa27.61■■■□□ 2.01
PDCD6-206ENST00000507528 KCNQ2O43526 872 aa27.61■■■□□ 2.01
PDCD6-206ENST00000507528 NLRP6P59044 892 aa27.6■■■□□ 2.01
PDCD6-206ENST00000507528 CABP1Q9NZU7 370 aa27.6■■■□□ 2.01
PDCD6-206ENST00000507528 CASZ1Q86V15 1759 aa27.58■■■□□ 2
PDCD6-206ENST00000507528 YY1P25490 414 aa27.57■■■□□ 2
PDCD6-206ENST00000507528 DDB1Q16531 1140 aa27.57■■■□□ 2
PDCD6-206ENST00000507528 AKAP12Q02952 1782 aa27.57■■■□□ 2
PDCD6-206ENST00000507528 NINLQ9Y2I6 1382 aa27.57■■■□□ 2
PDCD6-206ENST00000507528 ZBTB7CA1YPR0 619 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms