RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 ATRNO75882 1429 aa10.85□□□□□ -0.67
SFXN1-206ENST00000507017 CARD11Q9BXL7 1154 aa10.85□□□□□ -0.67
SFXN1-206ENST00000507017 ALS2Q96Q42 1657 aa10.85□□□□□ -0.67
SFXN1-206ENST00000507017 PPIP5K1Q6PFW1 1433 aa10.84□□□□□ -0.67
SFXN1-206ENST00000507017 UNC5CLQ8IV45 518 aa10.84□□□□□ -0.67
SFXN1-206ENST00000507017 ABCA3Q99758 1704 aa10.84□□□□□ -0.67
SFXN1-206ENST00000507017 SLIT2O94813 1529 aa10.84□□□□□ -0.67
SFXN1-206ENST00000507017 ZNF692Q9BU19 519 aaPredicted RBP10.83□□□□□ -0.68
SFXN1-206ENST00000507017 ACEP12821 1306 aa10.83□□□□□ -0.68
SFXN1-206ENST00000507017 COL14A1Q05707 1796 aaKnown RBP10.82□□□□□ -0.68
SFXN1-206ENST00000507017 NBPF8Q3BBV2 869 aa10.82□□□□□ -0.68
SFXN1-206ENST00000507017 NLRP13Q86W25 1043 aa10.82□□□□□ -0.68
SFXN1-206ENST00000507017 RGS12O14924 1447 aa10.82□□□□□ -0.68
SFXN1-206ENST00000507017 BCL9LQ86UU0 1499 aa10.81□□□□□ -0.68
SFXN1-206ENST00000507017 GJD4Q96KN9 370 aaPredicted RBP10.81□□□□□ -0.68
SFXN1-206ENST00000507017 PRDM11Q9NQV5 511 aa10.81□□□□□ -0.68
SFXN1-206ENST00000507017 PLCH1Q4KWH8 1693 aa10.81□□□□□ -0.68
SFXN1-206ENST00000507017 NINLQ9Y2I6 1382 aa10.8□□□□□ -0.68
SFXN1-206ENST00000507017 VPS72Q15906 364 aa10.8□□□□□ -0.68
SFXN1-206ENST00000507017 ABTB2Q8N961 1025 aa10.8□□□□□ -0.68
SFXN1-206ENST00000507017 PUS7Q96PZ0 661 aaKnown RBP10.8□□□□□ -0.68
SFXN1-206ENST00000507017 CABP2Q9NPB3 220 aa10.8□□□□□ -0.68
SFXN1-206ENST00000507017 CCDC9Q9Y3X0 531 aaKnown RBP10.8□□□□□ -0.68
SFXN1-206ENST00000507017 USP6P35125 1406 aa10.79□□□□□ -0.68
SFXN1-206ENST00000507017 CCDC125Q86Z20 511 aa10.79□□□□□ -0.68
SFXN1-206ENST00000507017 TTC21AQ8NDW8 1320 aa10.79□□□□□ -0.68
SFXN1-206ENST00000507017 PHRF1Q9P1Y6 1649 aaKnown RBP10.78□□□□□ -0.68
SFXN1-206ENST00000507017 CDCA8Q53HL2 280 aa10.78□□□□□ -0.68
SFXN1-206ENST00000507017 HDGFL2Q7Z4V5 671 aaPredicted RBP10.78□□□□□ -0.68
SFXN1-206ENST00000507017 CABLES1Q8TDN4 633 aa10.78□□□□□ -0.68
SFXN1-206ENST00000507017 PLEKHG5O94827 1062 aa10.77□□□□□ -0.69
SFXN1-206ENST00000507017 TERF2IPQ9NYB0 399 aa10.77□□□□□ -0.69
SFXN1-206ENST00000507017 CABP1Q9NZU7 370 aa10.77□□□□□ -0.69
SFXN1-206ENST00000507017 CRYBG1Q9Y4K1 1723 aa10.77□□□□□ -0.69
SFXN1-206ENST00000507017 USP19O94966 1318 aa10.77□□□□□ -0.69
SFXN1-206ENST00000507017 CPDO75976 1380 aa10.77□□□□□ -0.69
SFXN1-206ENST00000507017 KCNH5Q8NCM2 988 aa10.76□□□□□ -0.69
SFXN1-206ENST00000507017 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
SFXN1-206ENST00000507017 A0A0G2JS52 829 aa10.75□□□□□ -0.69
SFXN1-206ENST00000507017 FAM83GA6ND36 823 aa10.75□□□□□ -0.69
SFXN1-206ENST00000507017 MYT1Q01538 1121 aa10.75□□□□□ -0.69
SFXN1-206ENST00000507017 SF3B2Q13435 895 aaKnown RBP10.75□□□□□ -0.69
SFXN1-206ENST00000507017 UPF1Q92900 1129 aaKnown RBP eCLIP10.75□□□□□ -0.69
SFXN1-206ENST00000507017 KTN1Q86UP2 1357 aaKnown RBP10.75□□□□□ -0.69
SFXN1-206ENST00000507017 KIAA0232Q92628 1395 aa10.75□□□□□ -0.69
SFXN1-206ENST00000507017 NRAPQ86VF7 1730 aa10.75□□□□□ -0.69
SFXN1-206ENST00000507017 NRKQ7Z2Y5 1582 aa10.74□□□□□ -0.69
SFXN1-206ENST00000507017 EVA1CP58658 441 aa10.74□□□□□ -0.69
SFXN1-206ENST00000507017 NLRP6P59044 892 aa10.74□□□□□ -0.69
SFXN1-206ENST00000507017 PCGF6Q9BYE7 350 aa10.74□□□□□ -0.69
SFXN1-206ENST00000507017 AKAP12Q02952 1782 aa10.74□□□□□ -0.69
SFXN1-206ENST00000507017 GLI3P10071 1580 aa10.73□□□□□ -0.69
SFXN1-206ENST00000507017 C11orf95C9JLR9 678 aaPredicted RBP10.73□□□□□ -0.69
SFXN1-206ENST00000507017 TMF1P82094 1093 aa10.73□□□□□ -0.69
SFXN1-206ENST00000507017 CCER1Q8TC90 406 aaPredicted RBP10.73□□□□□ -0.69
SFXN1-206ENST00000507017 CPSF1Q10570 1443 aaKnown RBP10.73□□□□□ -0.69
SFXN1-206ENST00000507017 ABCC6O95255 1503 aa10.73□□□□□ -0.69
SFXN1-206ENST00000507017 ONECUT3O60422 494 aaPredicted RBP10.72□□□□□ -0.69
SFXN1-206ENST00000507017 GCP02774 474 aa10.72□□□□□ -0.69
SFXN1-206ENST00000507017 ZC3H6P61129 1189 aaKnown RBP10.72□□□□□ -0.69
SFXN1-206ENST00000507017 NUTM2GQ5VZR2 741 aa10.72□□□□□ -0.69
SFXN1-206ENST00000507017 SEPT12Q8IYM1 358 aa10.72□□□□□ -0.69
SFXN1-206ENST00000507017 TMC1Q8TDI8 760 aa10.72□□□□□ -0.69
SFXN1-206ENST00000507017 SPATA31A5Q5VU36 1347 aa10.72□□□□□ -0.69
SFXN1-206ENST00000507017 TTC21BQ7Z4L5 1316 aa10.72□□□□□ -0.69
SFXN1-206ENST00000507017 SPATA31A7Q8IWB4 1347 aa10.72□□□□□ -0.69
SFXN1-206ENST00000507017 USP47Q96K76 1375 aa10.72□□□□□ -0.69
SFXN1-206ENST00000507017 EDC4Q6P2E9 1401 aaKnown RBP10.72□□□□□ -0.69
SFXN1-206ENST00000507017 SLIT3O75094 1523 aa10.72□□□□□ -0.69
SFXN1-206ENST00000507017 MON2Q7Z3U7 1717 aa10.72□□□□□ -0.69
SFXN1-206ENST00000507017 AATKQ6ZMQ8 1374 aa10.71□□□□□ -0.69
SFXN1-206ENST00000507017 SSH2Q76I76 1423 aa10.71□□□□□ -0.69
SFXN1-206ENST00000507017 KRT27Q7Z3Y8 459 aa10.71□□□□□ -0.69
SFXN1-206ENST00000507017 THRAP3Q9Y2W1 955 aaKnown RBP10.71□□□□□ -0.69
SFXN1-206ENST00000507017 BLMP54132 1417 aaPredicted RBP10.7□□□□□ -0.7
SFXN1-206ENST00000507017 ST20-MTHFSA0A0A6YYL1 179 aa10.7□□□□□ -0.7
SFXN1-206ENST00000507017 PIK3C2AO00443 1686 aa10.69□□□□□ -0.7
SFXN1-206ENST00000507017 SPATA31A1Q5TZJ5 1347 aa10.69□□□□□ -0.7
SFXN1-206ENST00000507017 CDCA7Q9BWT1 371 aaPredicted RBP10.69□□□□□ -0.7
SFXN1-206ENST00000507017 STRN4Q9NRL3 753 aa10.69□□□□□ -0.7
SFXN1-206ENST00000507017 USP54Q70EL1 1684 aa10.69□□□□□ -0.7
SFXN1-206ENST00000507017 USP31Q70CQ4 1352 aa10.68□□□□□ -0.7
SFXN1-206ENST00000507017 CHRNA2Q15822 529 aa10.68□□□□□ -0.7
SFXN1-206ENST00000507017 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
SFXN1-206ENST00000507017 BARGINQ6ZT62 677 aa10.68□□□□□ -0.7
SFXN1-206ENST00000507017 TCP11L2Q8N4U5 519 aa10.68□□□□□ -0.7
SFXN1-206ENST00000507017 LMO7Q8WWI1 1683 aa10.68□□□□□ -0.7
SFXN1-206ENST00000507017 CRB1P82279 1406 aa10.67□□□□□ -0.7
SFXN1-206ENST00000507017 ZBTB7CA1YPR0 619 aa10.67□□□□□ -0.7
SFXN1-206ENST00000507017 TESK2Q96S53 571 aa10.67□□□□□ -0.7
SFXN1-206ENST00000507017 COL5A2P05997 1499 aaPredicted RBP10.67□□□□□ -0.7
SFXN1-206ENST00000507017 THSD7AQ9UPZ6 1657 aa10.66□□□□□ -0.7
SFXN1-206ENST00000507017 ANKRD36BQ8N2N9 1353 aa10.66□□□□□ -0.7
SFXN1-206ENST00000507017 BAG6P46379 1132 aa10.66□□□□□ -0.7
SFXN1-206ENST00000507017 PDE3BQ13370 1112 aa10.66□□□□□ -0.7
SFXN1-206ENST00000507017 A0A1W2PP64 1363 aa10.65□□□□□ -0.7
SFXN1-206ENST00000507017 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
SFXN1-206ENST00000507017 FAM196AQ6ZSG2 479 aa10.65□□□□□ -0.7
SFXN1-206ENST00000507017 TOM1L2Q6ZVM7 507 aa10.65□□□□□ -0.7
SFXN1-206ENST00000507017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms