RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 PTPRUQ92729 1446 aa27.37■■□□□ 1.97
TTC39B-204ENST00000505732 PRR36Q9H6K5 1346 aa27.36■■□□□ 1.97
TTC39B-204ENST00000505732 CRBNQ96SW2 442 aa27.36■■□□□ 1.97
TTC39B-204ENST00000505732 TBX22Q9Y458 520 aa27.36■■□□□ 1.97
TTC39B-204ENST00000505732 PNPLA6Q8IY17 1366 aa27.36■■□□□ 1.97
TTC39B-204ENST00000505732 CCDC27Q2M243 656 aa27.36■■□□□ 1.97
TTC39B-204ENST00000505732 C20orf194Q5TEA3 1177 aa27.35■■□□□ 1.97
TTC39B-204ENST00000505732 NCBP3Q53F19 620 aaKnown RBP27.34■■□□□ 1.97
TTC39B-204ENST00000505732 WDR63Q8IWG1 891 aa27.34■■□□□ 1.97
TTC39B-204ENST00000505732 DIAPH1O60610 1272 aaKnown RBP27.34■■□□□ 1.97
TTC39B-204ENST00000505732 FBLN1P23142 703 aa27.34■■□□□ 1.97
TTC39B-204ENST00000505732 NME9Q86XW9 330 aa27.34■■□□□ 1.97
TTC39B-204ENST00000505732 AMOTL2Q9Y2J4 779 aa27.34■■□□□ 1.97
TTC39B-204ENST00000505732 PLEKHF1Q96S99 279 aa27.33■■□□□ 1.97
TTC39B-204ENST00000505732 POLKQ9UBT6 870 aa27.33■■□□□ 1.97
TTC39B-204ENST00000505732 CDC42BPGQ6DT37 1551 aa27.33■■□□□ 1.96
TTC39B-204ENST00000505732 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.32■■□□□ 1.96
TTC39B-204ENST00000505732 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.32■■□□□ 1.96
TTC39B-204ENST00000505732 ZNF692Q9BU19 519 aaPredicted RBP27.32■■□□□ 1.96
TTC39B-204ENST00000505732 ZRANB1Q9UGI0 708 aa27.3■■□□□ 1.96
TTC39B-204ENST00000505732 PPM1GO15355 546 aaPredicted RBP27.29■■□□□ 1.96
TTC39B-204ENST00000505732 ADGRB2O60241 1585 aa27.29■■□□□ 1.96
TTC39B-204ENST00000505732 BCAR3O75815 825 aa27.27■■□□□ 1.96
TTC39B-204ENST00000505732 NUTM2FA1L443 756 aa27.26■■□□□ 1.95
TTC39B-204ENST00000505732 COG3Q96JB2 828 aa27.25■■□□□ 1.95
TTC39B-204ENST00000505732 TMPOP42166 694 aaKnown RBP27.25■■□□□ 1.95
TTC39B-204ENST00000505732 PLEKHG3A1L390 1219 aa27.24■■□□□ 1.95
TTC39B-204ENST00000505732 MAPK8IP3Q9UPT6 1336 aa27.24■■□□□ 1.95
TTC39B-204ENST00000505732 MON2Q7Z3U7 1717 aa27.24■■□□□ 1.95
TTC39B-204ENST00000505732 PNNQ9H307 717 aaKnown RBP27.23■■□□□ 1.95
TTC39B-204ENST00000505732 EMILIN1Q9Y6C2 1016 aa27.23■■□□□ 1.95
TTC39B-204ENST00000505732 PTCH1Q13635 1447 aa27.22■■□□□ 1.95
TTC39B-204ENST00000505732 AATKQ6ZMQ8 1374 aa27.22■■□□□ 1.95
TTC39B-204ENST00000505732 ACEP12821 1306 aa27.22■■□□□ 1.95
TTC39B-204ENST00000505732 AKAP12Q02952 1782 aa27.21■■□□□ 1.95
TTC39B-204ENST00000505732 FCHSD2O94868 740 aa27.21■■□□□ 1.95
TTC39B-204ENST00000505732 DIP2AQ14689 1571 aa27.2■■□□□ 1.95
TTC39B-204ENST00000505732 CEP170BQ9Y4F5 1589 aaPredicted RBP27.2■■□□□ 1.94
TTC39B-204ENST00000505732 MYH16Q9H6N6 1097 aa27.19■■□□□ 1.94
TTC39B-204ENST00000505732 TRIM35Q9UPQ4 493 aa27.19■■□□□ 1.94
TTC39B-204ENST00000505732 ITSN1Q15811 1721 aa27.19■■□□□ 1.94
TTC39B-204ENST00000505732 RIMS1Q86UR5 1692 aaKnown RBP27.19■■□□□ 1.94
TTC39B-204ENST00000505732 MAP2P11137 1827 aaKnown RBP27.18■■□□□ 1.94
TTC39B-204ENST00000505732 TTC21BQ7Z4L5 1316 aa27.18■■□□□ 1.94
TTC39B-204ENST00000505732 RIPK4P57078 832 aa27.16■■□□□ 1.94
TTC39B-204ENST00000505732 RRS1Q15050 365 aaKnown RBP27.16■■□□□ 1.94
TTC39B-204ENST00000505732 RSPH6AQ9H0K4 717 aa27.16■■□□□ 1.94
TTC39B-204ENST00000505732 TOPAZ1Q8N9V7 1692 aa27.16■■□□□ 1.94
TTC39B-204ENST00000505732 IL13P35225 146 aa27.15■■□□□ 1.94
TTC39B-204ENST00000505732 RARSP54136 660 aaKnown RBP27.15■■□□□ 1.94
TTC39B-204ENST00000505732 KCNA6P17658 529 aa27.14■■□□□ 1.94
TTC39B-204ENST00000505732 PRKAR2BP31323 418 aa27.14■■□□□ 1.94
TTC39B-204ENST00000505732 CDK12Q9NYV4 1490 aaPredicted RBP27.14■■□□□ 1.93
TTC39B-204ENST00000505732 USP6P35125 1406 aa27.14■■□□□ 1.93
TTC39B-204ENST00000505732 PIK3R4Q99570 1358 aa27.11■■□□□ 1.93
TTC39B-204ENST00000505732 HMOX1P09601 288 aa27.11■■□□□ 1.93
TTC39B-204ENST00000505732 ANKLE2Q86XL3 938 aa27.11■■□□□ 1.93
TTC39B-204ENST00000505732 PMFBP1Q8TBY8 1022 aa27.11■■□□□ 1.93
TTC39B-204ENST00000505732 PDE3AQ14432 1141 aa27.1■■□□□ 1.93
TTC39B-204ENST00000505732 LRRC7Q96NW7 1537 aa27.1■■□□□ 1.93
TTC39B-204ENST00000505732 XRN1Q8IZH2 1706 aaKnown RBP27.1■■□□□ 1.93
TTC39B-204ENST00000505732 NEFMP07197 916 aa27.1■■□□□ 1.93
TTC39B-204ENST00000505732 TSR2Q969E8 191 aaKnown RBP27.09■■□□□ 1.93
TTC39B-204ENST00000505732 NRKQ7Z2Y5 1582 aa27.09■■□□□ 1.93
TTC39B-204ENST00000505732 CANXP27824 592 aaKnown RBP27.08■■□□□ 1.93
TTC39B-204ENST00000505732 IL16Q14005 1332 aa27.08■■□□□ 1.93
TTC39B-204ENST00000505732 FANCIQ9NVI1 1328 aa27.08■■□□□ 1.93
TTC39B-204ENST00000505732 SSH2Q76I76 1423 aa27.07■■□□□ 1.92
TTC39B-204ENST00000505732 FRAT1Q92837 279 aaPredicted RBP27.07■■□□□ 1.92
TTC39B-204ENST00000505732 PHACTR3Q96KR7 559 aa27.07■■□□□ 1.92
TTC39B-204ENST00000505732 OVOS2A0A0J9YW53 1432 aa27.07■■□□□ 1.92
TTC39B-204ENST00000505732 OVOS2Q6IE36 1432 aa27.07■■□□□ 1.92
TTC39B-204ENST00000505732 ADAMTSL3P82987 1691 aa27.07■■□□□ 1.92
TTC39B-204ENST00000505732 NGDNQ8NEJ9 315 aaKnown RBP27.05■■□□□ 1.92
TTC39B-204ENST00000505732 KDM2BQ8NHM5 1336 aa27.05■■□□□ 1.92
TTC39B-204ENST00000505732 BCL2L13Q9BXK5 485 aa27.04■■□□□ 1.92
TTC39B-204ENST00000505732 TCERG1O14776 1098 aaKnown RBP27.04■■□□□ 1.92
TTC39B-204ENST00000505732 CT47B1P0C2W7 299 aaPredicted RBP27.04■■□□□ 1.92
TTC39B-204ENST00000505732 DNAJC5Q9H3Z4 198 aa27.04■■□□□ 1.92
TTC39B-204ENST00000505732 TTC21AQ8NDW8 1320 aa27.03■■□□□ 1.92
TTC39B-204ENST00000505732 EXOSC9Q06265 439 aaKnown RBP27.03■■□□□ 1.92
TTC39B-204ENST00000505732 NFE2L2Q16236 605 aa27.03■■□□□ 1.92
TTC39B-204ENST00000505732 PANK1Q8TE04 598 aa27.03■■□□□ 1.92
TTC39B-204ENST00000505732 CENPQQ7L2Z9 268 aaPredicted RBP27.02■■□□□ 1.92
TTC39B-204ENST00000505732 USP31Q70CQ4 1352 aa27.01■■□□□ 1.91
TTC39B-204ENST00000505732 COG6Q9Y2V7 657 aa27■■□□□ 1.91
TTC39B-204ENST00000505732 ZNF142P52746 1687 aaPredicted RBP27■■□□□ 1.91
TTC39B-204ENST00000505732 ANKARQ7Z5J8 1434 aa26.99■■□□□ 1.91
TTC39B-204ENST00000505732 EIF4A2Q14240 407 aaKnown RBP26.98■■□□□ 1.91
TTC39B-204ENST00000505732 RGPD8O14715 1765 aaPredicted RBP26.97■■□□□ 1.91
TTC39B-204ENST00000505732 SETD1BQ9UPS6 1966 aaKnown RBP26.97■■□□□ 1.91
TTC39B-204ENST00000505732 SOX12O15370 315 aa26.96■■□□□ 1.91
TTC39B-204ENST00000505732 SKAP1Q86WV1 359 aa26.96■■□□□ 1.91
TTC39B-204ENST00000505732 TNNQ9UQP3 1299 aa26.96■■□□□ 1.91
TTC39B-204ENST00000505732 MS4A1P11836 297 aa26.94■■□□□ 1.9
TTC39B-204ENST00000505732 RLBP1P12271 317 aa26.94■■□□□ 1.9
TTC39B-204ENST00000505732 HSP90AB2PQ58FF8 381 aa26.94■■□□□ 1.9
TTC39B-204ENST00000505732 NALCNQ8IZF0 1738 aa26.93■■□□□ 1.9
TTC39B-204ENST00000505732 CLUAP1Q96AJ1 413 aa26.93■■□□□ 1.9
TTC39B-204ENST00000505732 THUMPD2Q9BTF0 503 aaKnown RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms