RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 RECKO95980 971 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 SLFNL1Q499Z3 407 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 ANKMY2Q8IV38 441 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 ZNF594Q96JF6 807 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 DNAJC2Q99543 621 aaKnown RBP5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 SLAIN2Q9P270 581 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 RBM19Q9Y4C8 960 aaKnown RBP5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 PCDHGA4Q9Y5G9 962 aa5.23□□□□□ -1.57
HMGB1P22-201ENST00000505315 CADPSQ9ULU8 1353 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 ATP5J2-PTCD1G3V325 749 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 PRMT3O60678 531 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 SLC34A2O95436 690 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 BRD2P25440 801 aaKnown RBP5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 GCGRP47871 477 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 FOSBP53539 338 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 ATN1P54259 1190 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 DPYDQ12882 1025 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 NCOA4Q13772 614 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 EAPPQ56P03 285 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 GIMAP6Q6P9H5 292 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 C3orf67Q6ZVT6 689 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 NFATC2IPQ8NCF5 419 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 TMEM134Q9H6X4 195 aa5.22□□□□□ -1.57
HMGB1P22-201ENST00000505315 PTK7Q13308 1070 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 GRIPAP1Q4V328 841 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 PLEKHM2Q8IWE5 1019 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 BACH2Q9BYV9 841 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 ADAM33Q9BZ11 813 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 FAM198AQ9UFP1 575 aa5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 TMA7Q9Y2S6 64 aaKnown RBP5.21□□□□□ -1.58
HMGB1P22-201ENST00000505315 ZBBXA8MT70 800 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 SCAMP3O14828 347 aaKnown RBP5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 GALR2O43603 387 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 FBXO45P0C2W1 286 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 GTF2F1P35269 517 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 IER5LQ5T953 404 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 FBXO33Q7Z6M2 555 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 PACS2Q86VP3 889 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 FAM174AQ8TBP5 190 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 TATDN2Q93075 761 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 PRIMPOLQ96LW4 560 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 MRS2Q9HD23 443 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 DCTN4Q9UJW0 460 aa5.2□□□□□ -1.58
HMGB1P22-201ENST00000505315 SMAPO00193 183 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 PER1O15534 1290 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 LZTS3O60299 673 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 MARCH6O60337 910 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 ATP2B1P20020 1258 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 HDLBPQ00341 1268 aaKnown RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 XPCQ01831 940 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 FAM69CQ0P6D2 419 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 RNF135Q8IUD6 432 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 OGFOD1Q8N543 542 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 TMEM87AQ8NBN3 555 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 TMC1Q8TDI8 760 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 SYMPKQ92797 1274 aaKnown RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 ASB16Q96NS5 453 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 CCSER2Q9H7U1 834 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 CAPN10Q9HC96 672 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 BRPF3Q9ULD4 1205 aa5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 IQSEC3Q9UPP2 1182 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P22-201ENST00000505315 ICMTO60725 284 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 KCNH2Q12809 1159 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 SWI5Q1ZZU3 235 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 EML3Q32P44 896 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 CHRDL2Q6WN34 429 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 ZNF662Q6ZS27 426 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 NOP9Q86U38 636 aaKnown RBP5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 TRIM50Q86XT4 487 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 CERS3Q8IU89 383 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 PMFBP1Q8TBY8 1022 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 PIK3R5Q8WYR1 880 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 DHX38Q92620 1227 aaKnown RBP5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 DNAAF2Q9NVR5 837 aaKnown RBP5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 PRKAG2Q9UGJ0 569 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 EGFL7Q9UHF1 273 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 TSKSQ9UJT2 592 aa5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P22-201ENST00000505315 SLC4A3P48751 1232 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 ATP1A2P50993 1020 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 PSME1Q06323 249 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 GNL2Q13823 731 aaKnown RBP5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 PLPP7Q8NBV4 271 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 HINFPQ9BQA5 517 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 MKNK1Q9BUB5 465 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 LNPKQ9C0E8 428 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 PCDHB9Q9Y5E1 797 aa5.17□□□□□ -1.58
HMGB1P22-201ENST00000505315 LGR5O75473 907 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 FMNL1O95466 1100 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 C7P10643 843 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 COL9A1P20849 921 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 HDGFP51858 240 aaKnown RBP5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 NT5DC4Q86YG4 428 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 POTEDQ86YR6 584 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 ZNF526Q8TF50 670 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 GTF3C2Q8WUA4 911 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 NOD1Q9Y239 953 aa5.16□□□□□ -1.58
HMGB1P22-201ENST00000505315 C3orf80F5H4A9 247 aa5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 C21orf2O43822 256 aa5.15□□□□□ -1.59
HMGB1P22-201ENST00000505315 ITGAEP38570 1179 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms