RNA–Protein interactions for RNA: ENST00000503868.5

PTCD2-207, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,653 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-207ENST00000503868 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
PTCD2-207ENST00000503868 MST1RQ04912 1400 aa18.31■□□□□ 0.52
PTCD2-207ENST00000503868 ATF3P18847 181 aa18.31■□□□□ 0.52
PTCD2-207ENST00000503868 MSH6P52701 1360 aa18.3■□□□□ 0.52
PTCD2-207ENST00000503868 ESCO1Q5FWF5 840 aa18.3■□□□□ 0.52
PTCD2-207ENST00000503868 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
PTCD2-207ENST00000503868 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
PTCD2-207ENST00000503868 NME9Q86XW9 330 aa18.29■□□□□ 0.52
PTCD2-207ENST00000503868 ORAI2Q96SN7 254 aa18.29■□□□□ 0.52
PTCD2-207ENST00000503868 TTC21AQ8NDW8 1320 aa18.28■□□□□ 0.52
PTCD2-207ENST00000503868 KIF1AQ12756 1690 aa18.28■□□□□ 0.52
PTCD2-207ENST00000503868 FAM9BQ8IZU0 186 aa18.27■□□□□ 0.52
PTCD2-207ENST00000503868 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.51
PTCD2-207ENST00000503868 TNNT2P45379 298 aaPredicted RBP18.26■□□□□ 0.51
PTCD2-207ENST00000503868 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
PTCD2-207ENST00000503868 LTBP4Q8N2S1 1624 aa18.26■□□□□ 0.51
PTCD2-207ENST00000503868 OVOS2A0A0J9YW53 1432 aa18.25■□□□□ 0.51
PTCD2-207ENST00000503868 PIK3C2AO00443 1686 aa18.25■□□□□ 0.51
PTCD2-207ENST00000503868 OVOS2Q6IE36 1432 aa18.25■□□□□ 0.51
PTCD2-207ENST00000503868 USP31Q70CQ4 1352 aa18.25■□□□□ 0.51
PTCD2-207ENST00000503868 MAP2P11137 1827 aaKnown RBP18.24■□□□□ 0.51
PTCD2-207ENST00000503868 USP54Q70EL1 1684 aa18.24■□□□□ 0.51
PTCD2-207ENST00000503868 COG3Q96JB2 828 aa18.24■□□□□ 0.51
PTCD2-207ENST00000503868 MTHFSP49914 203 aa18.23■□□□□ 0.51
PTCD2-207ENST00000503868 AATKQ6ZMQ8 1374 aa18.22■□□□□ 0.51
PTCD2-207ENST00000503868 MARF1Q9Y4F3 1742 aaKnown RBP18.22■□□□□ 0.51
PTCD2-207ENST00000503868 FOXO3O43524 673 aa18.22■□□□□ 0.51
PTCD2-207ENST00000503868 PSME1Q06323 249 aa18.22■□□□□ 0.51
PTCD2-207ENST00000503868 TRPM3Q9HCF6 1732 aaPredicted RBP18.21■□□□□ 0.51
PTCD2-207ENST00000503868 INSRP06213 1382 aa18.2■□□□□ 0.5
PTCD2-207ENST00000503868 SLAIN2Q9P270 581 aa18.19■□□□□ 0.5
PTCD2-207ENST00000503868 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
PTCD2-207ENST00000503868 FBLN1P23142 703 aa18.18■□□□□ 0.5
PTCD2-207ENST00000503868 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
PTCD2-207ENST00000503868 PNPLA6Q8IY17 1366 aa18.18■□□□□ 0.5
PTCD2-207ENST00000503868 SMG6Q86US8 1419 aaKnown RBP18.18■□□□□ 0.5
PTCD2-207ENST00000503868 KRT28Q7Z3Y7 464 aa18.17■□□□□ 0.5
PTCD2-207ENST00000503868 PAK3O75914 559 aaPredicted RBP18.16■□□□□ 0.5
PTCD2-207ENST00000503868 BRINP3Q76B58 766 aa18.16■□□□□ 0.5
PTCD2-207ENST00000503868 ABTB2Q8N961 1025 aa18.16■□□□□ 0.5
PTCD2-207ENST00000503868 COL3A1P02461 1466 aaPredicted RBP18.16■□□□□ 0.5
PTCD2-207ENST00000503868 NLRP6P59044 892 aa18.15■□□□□ 0.5
PTCD2-207ENST00000503868 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
PTCD2-207ENST00000503868 ADAMTS8Q9UP79 889 aa18.15■□□□□ 0.5
PTCD2-207ENST00000503868 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
PTCD2-207ENST00000503868 HNRNPUQ00839 825 aaKnown RBP eCLIP18.14■□□□□ 0.49
PTCD2-207ENST00000503868 NPHP3Q7Z494 1330 aa18.14■□□□□ 0.49
PTCD2-207ENST00000503868 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
PTCD2-207ENST00000503868 WDR43Q15061 677 aaKnown RBP eCLIP18.13■□□□□ 0.49
PTCD2-207ENST00000503868 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
PTCD2-207ENST00000503868 BLMP54132 1417 aaPredicted RBP18.13■□□□□ 0.49
PTCD2-207ENST00000503868 PXDNQ92626 1479 aa18.13■□□□□ 0.49
PTCD2-207ENST00000503868 SBNO1A3KN83 1393 aa18.12■□□□□ 0.49
PTCD2-207ENST00000503868 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
PTCD2-207ENST00000503868 DDX17Q92841 729 aaKnown RBP18.12■□□□□ 0.49
PTCD2-207ENST00000503868 CDK12Q9NYV4 1490 aaPredicted RBP18.11■□□□□ 0.49
PTCD2-207ENST00000503868 RRS1Q15050 365 aaKnown RBP18.11■□□□□ 0.49
PTCD2-207ENST00000503868 NUTM2GQ5VZR2 741 aa18.11■□□□□ 0.49
PTCD2-207ENST00000503868 PEAK1Q9H792 1746 aa18.1■□□□□ 0.49
PTCD2-207ENST00000503868 SLIT3O75094 1523 aa18.09■□□□□ 0.49
PTCD2-207ENST00000503868 NHSL1Q5SYE7 1610 aa18.08■□□□□ 0.49
PTCD2-207ENST00000503868 DIAPH1O60610 1272 aaKnown RBP18.08■□□□□ 0.48
PTCD2-207ENST00000503868 SOS2Q07890 1332 aaPredicted RBP18.08■□□□□ 0.48
PTCD2-207ENST00000503868 NFAT5O94916 1531 aa18.07■□□□□ 0.48
PTCD2-207ENST00000503868 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
PTCD2-207ENST00000503868 USP19O94966 1318 aa18.07■□□□□ 0.48
PTCD2-207ENST00000503868 MAP3K19Q56UN5 1328 aa18.07■□□□□ 0.48
PTCD2-207ENST00000503868 ZBED9Q6R2W3 1325 aa18.07■□□□□ 0.48
PTCD2-207ENST00000503868 NUDCQ9Y266 331 aa18.06■□□□□ 0.48
PTCD2-207ENST00000503868 SPATA31A3Q5VYP0 1347 aa18.06■□□□□ 0.48
PTCD2-207ENST00000503868 IL13P35225 146 aa18.06■□□□□ 0.48
PTCD2-207ENST00000503868 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
PTCD2-207ENST00000503868 KIF24Q5T7B8 1368 aa18.06■□□□□ 0.48
PTCD2-207ENST00000503868 TNS3Q68CZ2 1445 aa18.06■□□□□ 0.48
PTCD2-207ENST00000503868 SOX12O15370 315 aa18.05■□□□□ 0.48
PTCD2-207ENST00000503868 LTN1O94822 1766 aa18.04■□□□□ 0.48
PTCD2-207ENST00000503868 MED1Q15648 1581 aaPredicted RBP18.04■□□□□ 0.48
PTCD2-207ENST00000503868 PHRF1Q9P1Y6 1649 aaKnown RBP18.04■□□□□ 0.48
PTCD2-207ENST00000503868 GCP02774 474 aa18.03■□□□□ 0.48
PTCD2-207ENST00000503868 CRYBG1Q9Y4K1 1723 aa18.03■□□□□ 0.48
PTCD2-207ENST00000503868 ROBO1Q9Y6N7 1651 aa18.03■□□□□ 0.48
PTCD2-207ENST00000503868 FLT4P35916 1363 aa18.03■□□□□ 0.48
PTCD2-207ENST00000503868 LMOD2Q6P5Q4 547 aa18.03■□□□□ 0.48
PTCD2-207ENST00000503868 U2AF1L5P0DN76 240 aaPredicted RBP18.02■□□□□ 0.47
PTCD2-207ENST00000503868 U2AF1Q01081 240 aaKnown RBP eCLIP18.02■□□□□ 0.47
PTCD2-207ENST00000503868 HSP90AB2PQ58FF8 381 aa18.02■□□□□ 0.47
PTCD2-207ENST00000503868 ARHGEF10O15013 1369 aa18.01■□□□□ 0.47
PTCD2-207ENST00000503868 IQSEC2Q5JU85 1478 aa18■□□□□ 0.47
PTCD2-207ENST00000503868 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
PTCD2-207ENST00000503868 CCDC146Q8IYE0 955 aa18■□□□□ 0.47
PTCD2-207ENST00000503868 RTL1A6NKG5 1358 aa18■□□□□ 0.47
PTCD2-207ENST00000503868 HOXC9P31274 260 aa17.99■□□□□ 0.47
PTCD2-207ENST00000503868 AMPHP49418 695 aa17.99■□□□□ 0.47
PTCD2-207ENST00000503868 EIF4A2Q14240 407 aaKnown RBP17.99■□□□□ 0.47
PTCD2-207ENST00000503868 ARHGEF25Q86VW2 580 aa17.99■□□□□ 0.47
PTCD2-207ENST00000503868 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
PTCD2-207ENST00000503868 RGPD1P0DJD0 1748 aa17.99■□□□□ 0.47
PTCD2-207ENST00000503868 AHDC1Q5TGY3 1603 aaPredicted RBP17.99■□□□□ 0.47
PTCD2-207ENST00000503868 PLEKHF1Q96S99 279 aa17.99■□□□□ 0.47
PTCD2-207ENST00000503868 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms