RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 DHX37Q8IY37 1157 aaKnown RBP6.61□□□□□ -1.35
CLDND1-208ENST00000503004 PANK1Q8TE04 598 aa6.61□□□□□ -1.35
CLDND1-208ENST00000503004 NEXMIFQ5QGS0 1516 aa6.61□□□□□ -1.35
CLDND1-208ENST00000503004 TULP4Q9NRJ4 1543 aa6.61□□□□□ -1.35
CLDND1-208ENST00000503004 U2AF1L5P0DN76 240 aaPredicted RBP6.6□□□□□ -1.35
CLDND1-208ENST00000503004 CANXP27824 592 aaKnown RBP6.6□□□□□ -1.35
CLDND1-208ENST00000503004 U2AF1Q01081 240 aaKnown RBP eCLIP6.6□□□□□ -1.35
CLDND1-208ENST00000503004 IPO4Q8TEX9 1081 aaKnown RBP6.6□□□□□ -1.35
CLDND1-208ENST00000503004 COG6Q9Y2V7 657 aa6.6□□□□□ -1.35
CLDND1-208ENST00000503004 VASPP50552 380 aaPredicted RBP6.6□□□□□ -1.35
CLDND1-208ENST00000503004 RUNDC1Q96C34 613 aa6.6□□□□□ -1.35
CLDND1-208ENST00000503004 PRAM1Q96QH2 718 aa6.6□□□□□ -1.35
CLDND1-208ENST00000503004 SLC52A1Q9NWF4 448 aa6.6□□□□□ -1.35
CLDND1-208ENST00000503004 TNNQ9UQP3 1299 aa6.6□□□□□ -1.35
CLDND1-208ENST00000503004 A0A1W2PP64 1363 aa6.6□□□□□ -1.35
CLDND1-208ENST00000503004 ANKRD36BQ8N2N9 1353 aa6.6□□□□□ -1.35
CLDND1-208ENST00000503004 FAM69CQ0P6D2 419 aa6.59□□□□□ -1.35
CLDND1-208ENST00000503004 ZC3H13Q5T200 1668 aaKnown RBP6.59□□□□□ -1.35
CLDND1-208ENST00000503004 IGHDP01880 384 aa6.59□□□□□ -1.35
CLDND1-208ENST00000503004 MLECQ14165 292 aa6.59□□□□□ -1.35
CLDND1-208ENST00000503004 POGKQ9P215 609 aa6.59□□□□□ -1.35
CLDND1-208ENST00000503004 STAG3Q9UJ98 1225 aa6.59□□□□□ -1.35
CLDND1-208ENST00000503004 PIK3C2BO00750 1634 aa6.59□□□□□ -1.36
CLDND1-208ENST00000503004 SHPRHQ149N8 1683 aa6.59□□□□□ -1.36
CLDND1-208ENST00000503004 U2SURPO15042 1029 aaKnown RBP6.58□□□□□ -1.36
CLDND1-208ENST00000503004 CLUAP1Q96AJ1 413 aa6.58□□□□□ -1.36
CLDND1-208ENST00000503004 CFAP53Q96M91 514 aa6.58□□□□□ -1.36
CLDND1-208ENST00000503004 PNNQ9H307 717 aaKnown RBP6.58□□□□□ -1.36
CLDND1-208ENST00000503004 ARHGEF28Q8N1W1 1705 aaKnown RBP6.58□□□□□ -1.36
CLDND1-208ENST00000503004 FRAT2O75474 233 aaPredicted RBP6.58□□□□□ -1.36
CLDND1-208ENST00000503004 FBLN1P23142 703 aa6.58□□□□□ -1.36
CLDND1-208ENST00000503004 BRPF1P55201 1214 aaPredicted RBP6.58□□□□□ -1.36
CLDND1-208ENST00000503004 RICTORQ6R327 1708 aa6.58□□□□□ -1.36
CLDND1-208ENST00000503004 ARHGAP31Q2M1Z3 1444 aa6.58□□□□□ -1.36
CLDND1-208ENST00000503004 RLBP1P12271 317 aa6.58□□□□□ -1.36
CLDND1-208ENST00000503004 RARSP54136 660 aaKnown RBP6.58□□□□□ -1.36
CLDND1-208ENST00000503004 C8orf34Q49A92 452 aa6.58□□□□□ -1.36
CLDND1-208ENST00000503004 TSR2Q969E8 191 aaKnown RBP6.58□□□□□ -1.36
CLDND1-208ENST00000503004 FYB1O15117 783 aa6.57□□□□□ -1.36
CLDND1-208ENST00000503004 NGEFQ8N5V2 710 aa6.57□□□□□ -1.36
CLDND1-208ENST00000503004 PDCL3Q9H2J4 239 aa6.57□□□□□ -1.36
CLDND1-208ENST00000503004 MYO5BQ9ULV0 1848 aa6.57□□□□□ -1.36
CLDND1-208ENST00000503004 WAPLQ7Z5K2 1190 aa6.57□□□□□ -1.36
CLDND1-208ENST00000503004 CABP1Q9NZU7 370 aa6.57□□□□□ -1.36
CLDND1-208ENST00000503004 IQSEC2Q5JU85 1478 aa6.57□□□□□ -1.36
CLDND1-208ENST00000503004 PDE3AQ14432 1141 aa6.56□□□□□ -1.36
CLDND1-208ENST00000503004 CHMP4AQ9BY43 222 aa6.56□□□□□ -1.36
CLDND1-208ENST00000503004 ABCC11Q96J66 1382 aa6.56□□□□□ -1.36
CLDND1-208ENST00000503004 PTPRMP28827 1452 aa6.56□□□□□ -1.36
CLDND1-208ENST00000503004 YTHDC2Q9H6S0 1430 aaKnown RBP6.56□□□□□ -1.36
CLDND1-208ENST00000503004 CLCN1P35523 988 aa6.56□□□□□ -1.36
CLDND1-208ENST00000503004 FAM161AQ3B820 660 aa6.56□□□□□ -1.36
CLDND1-208ENST00000503004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLDND1-208ENST00000503004 PUS7Q96PZ0 661 aaKnown RBP6.56□□□□□ -1.36
CLDND1-208ENST00000503004 CDK19Q9BWU1 502 aa6.56□□□□□ -1.36
CLDND1-208ENST00000503004 IGSF3O75054 1194 aa6.55□□□□□ -1.36
CLDND1-208ENST00000503004 WDR63Q8IWG1 891 aa6.55□□□□□ -1.36
CLDND1-208ENST00000503004 TMEM131LA2VDJ0 1609 aa6.55□□□□□ -1.36
CLDND1-208ENST00000503004 ZFYVE9O95405 1425 aa6.55□□□□□ -1.36
CLDND1-208ENST00000503004 TERF2IPQ9NYB0 399 aa6.55□□□□□ -1.36
CLDND1-208ENST00000503004 PREX1Q8TCU6 1659 aa6.55□□□□□ -1.36
CLDND1-208ENST00000503004 NSD2O96028 1365 aa6.55□□□□□ -1.36
CLDND1-208ENST00000503004 CCDC27Q2M243 656 aa6.54□□□□□ -1.36
CLDND1-208ENST00000503004 ZFP91Q96JP5 570 aaPredicted RBP6.54□□□□□ -1.36
CLDND1-208ENST00000503004 ZNF830Q96NB3 372 aaPredicted RBP6.54□□□□□ -1.36
CLDND1-208ENST00000503004 PCDHB15Q9Y5E8 787 aa6.54□□□□□ -1.36
CLDND1-208ENST00000503004 CD163L1Q9NR16 1453 aa6.54□□□□□ -1.36
CLDND1-208ENST00000503004 USP32Q8NFA0 1604 aa6.54□□□□□ -1.36
CLDND1-208ENST00000503004 TSPOAP1O95153 1857 aa6.54□□□□□ -1.36
CLDND1-208ENST00000503004 TMPOP42166 694 aaKnown RBP6.54□□□□□ -1.36
CLDND1-208ENST00000503004 PLEKHF1Q96S99 279 aa6.54□□□□□ -1.36
CLDND1-208ENST00000503004 ZHX1Q9UKY1 873 aaPredicted RBP6.54□□□□□ -1.36
CLDND1-208ENST00000503004 ATAD2Q6PL18 1390 aa6.54□□□□□ -1.36
CLDND1-208ENST00000503004 ZBTB7CA1YPR0 619 aa6.54□□□□□ -1.36
CLDND1-208ENST00000503004 TRHP20396 242 aaPredicted RBP6.54□□□□□ -1.36
CLDND1-208ENST00000503004 BRD2P25440 801 aaKnown RBP6.54□□□□□ -1.36
CLDND1-208ENST00000503004 EXOSC9Q06265 439 aaKnown RBP6.54□□□□□ -1.36
CLDND1-208ENST00000503004 MYH16Q9H6N6 1097 aa6.54□□□□□ -1.36
CLDND1-208ENST00000503004 TRIM35Q9UPQ4 493 aa6.54□□□□□ -1.36
CLDND1-208ENST00000503004 NCKAP5LQ9HCH0 1330 aa6.53□□□□□ -1.36
CLDND1-208ENST00000503004 MAPK8IP3Q9UPT6 1336 aa6.53□□□□□ -1.36
CLDND1-208ENST00000503004 SEC24BO95487 1268 aa6.53□□□□□ -1.36
CLDND1-208ENST00000503004 SLC4A2P04920 1241 aa6.53□□□□□ -1.36
CLDND1-208ENST00000503004 HDGFL2Q7Z4V5 671 aaPredicted RBP6.53□□□□□ -1.36
CLDND1-208ENST00000503004 PLCD3Q8N3E9 789 aa6.53□□□□□ -1.36
CLDND1-208ENST00000503004 NLRP1Q9C000 1473 aa6.53□□□□□ -1.36
CLDND1-208ENST00000503004 ALKQ9UM73 1620 aa6.53□□□□□ -1.36
CLDND1-208ENST00000503004 RIPK4P57078 832 aa6.53□□□□□ -1.36
CLDND1-208ENST00000503004 DIAPH1O60610 1272 aaKnown RBP6.52□□□□□ -1.37
CLDND1-208ENST00000503004 FTSJ3Q8IY81 847 aaKnown RBP6.52□□□□□ -1.37
CLDND1-208ENST00000503004 DDRGK1Q96HY6 314 aa6.52□□□□□ -1.37
CLDND1-208ENST00000503004 SMC4Q9NTJ3 1288 aa6.52□□□□□ -1.37
CLDND1-208ENST00000503004 TMEM51Q9NW97 253 aa6.52□□□□□ -1.37
CLDND1-208ENST00000503004 NINLQ9Y2I6 1382 aa6.52□□□□□ -1.37
CLDND1-208ENST00000503004 HMOX1P09601 288 aa6.52□□□□□ -1.37
CLDND1-208ENST00000503004 CDK11BP21127 795 aaKnown RBP6.52□□□□□ -1.37
CLDND1-208ENST00000503004 TXNDC2Q86VQ3 553 aa6.52□□□□□ -1.37
CLDND1-208ENST00000503004 ARHGEF40Q8TER5 1519 aa6.52□□□□□ -1.37
CLDND1-208ENST00000503004 SSH1Q8WYL5 1049 aa6.51□□□□□ -1.37
CLDND1-208ENST00000503004 ZRANB1Q9UGI0 708 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms