RNA–Protein interactions for RNA: ENST00000502686.6

CTCFL-211, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-211ENST00000502686 TTC21BQ7Z4L5 1316 aa17.78■□□□□ 0.44
CTCFL-211ENST00000502686 NME9Q86XW9 330 aa17.78■□□□□ 0.44
CTCFL-211ENST00000502686 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
CTCFL-211ENST00000502686 PPP2R1AP30153 589 aa17.77■□□□□ 0.43
CTCFL-211ENST00000502686 NLRP13Q86W25 1043 aa17.76■□□□□ 0.43
CTCFL-211ENST00000502686 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
CTCFL-211ENST00000502686 KIF1AQ12756 1690 aa17.76■□□□□ 0.43
CTCFL-211ENST00000502686 TNNT2P45379 298 aaPredicted RBP17.76■□□□□ 0.43
CTCFL-211ENST00000502686 ZRANB1Q9UGI0 708 aa17.76■□□□□ 0.43
CTCFL-211ENST00000502686 ANKRD26Q9UPS8 1709 aa17.75■□□□□ 0.43
CTCFL-211ENST00000502686 FOXO3O43524 673 aa17.75■□□□□ 0.43
CTCFL-211ENST00000502686 PSME1Q06323 249 aa17.74■□□□□ 0.43
CTCFL-211ENST00000502686 TTC21AQ8NDW8 1320 aa17.74■□□□□ 0.43
CTCFL-211ENST00000502686 BRD4O60885 1362 aaPredicted RBP17.74■□□□□ 0.43
CTCFL-211ENST00000502686 SLAIN2Q9P270 581 aa17.74■□□□□ 0.43
CTCFL-211ENST00000502686 XPCQ01831 940 aaPredicted RBP17.72■□□□□ 0.43
CTCFL-211ENST00000502686 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
CTCFL-211ENST00000502686 COG3Q96JB2 828 aa17.71■□□□□ 0.43
CTCFL-211ENST00000502686 BRINP3Q76B58 766 aa17.71■□□□□ 0.42
CTCFL-211ENST00000502686 DDX17Q92841 729 aaKnown RBP17.7■□□□□ 0.42
CTCFL-211ENST00000502686 PIK3C2AO00443 1686 aa17.69■□□□□ 0.42
CTCFL-211ENST00000502686 KRT28Q7Z3Y7 464 aa17.69■□□□□ 0.42
CTCFL-211ENST00000502686 OVOS2A0A0J9YW53 1432 aa17.69■□□□□ 0.42
CTCFL-211ENST00000502686 OVOS2Q6IE36 1432 aa17.69■□□□□ 0.42
CTCFL-211ENST00000502686 ABTB2Q8N961 1025 aa17.67■□□□□ 0.42
CTCFL-211ENST00000502686 USP31Q70CQ4 1352 aa17.67■□□□□ 0.42
CTCFL-211ENST00000502686 NUTM2GQ5VZR2 741 aa17.67■□□□□ 0.42
CTCFL-211ENST00000502686 NPHP3Q7Z494 1330 aa17.67■□□□□ 0.42
CTCFL-211ENST00000502686 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
CTCFL-211ENST00000502686 FBLN1P23142 703 aa17.66■□□□□ 0.42
CTCFL-211ENST00000502686 NLRP6P59044 892 aa17.66■□□□□ 0.42
CTCFL-211ENST00000502686 YTHDC1Q96MU7 727 aaKnown RBP17.66■□□□□ 0.42
CTCFL-211ENST00000502686 TRPM3Q9HCF6 1732 aaPredicted RBP17.66■□□□□ 0.42
CTCFL-211ENST00000502686 MTHFSP49914 203 aa17.65■□□□□ 0.42
CTCFL-211ENST00000502686 FAM9BQ8IZU0 186 aa17.65■□□□□ 0.42
CTCFL-211ENST00000502686 PNISRQ8TF01 805 aaKnown RBP17.65■□□□□ 0.42
CTCFL-211ENST00000502686 PXDNQ92626 1479 aa17.63■□□□□ 0.41
CTCFL-211ENST00000502686 AATKQ6ZMQ8 1374 aa17.63■□□□□ 0.41
CTCFL-211ENST00000502686 MARF1Q9Y4F3 1742 aaKnown RBP17.63■□□□□ 0.41
CTCFL-211ENST00000502686 USP54Q70EL1 1684 aa17.63■□□□□ 0.41
CTCFL-211ENST00000502686 POLKQ9UBT6 870 aa17.62■□□□□ 0.41
CTCFL-211ENST00000502686 SBNO1A3KN83 1393 aa17.62■□□□□ 0.41
CTCFL-211ENST00000502686 SOX12O15370 315 aa17.62■□□□□ 0.41
CTCFL-211ENST00000502686 LMOD2Q6P5Q4 547 aa17.62■□□□□ 0.41
CTCFL-211ENST00000502686 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
CTCFL-211ENST00000502686 ALS2Q96Q42 1657 aa17.6■□□□□ 0.41
CTCFL-211ENST00000502686 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
CTCFL-211ENST00000502686 EMILIN1Q9Y6C2 1016 aa17.6■□□□□ 0.41
CTCFL-211ENST00000502686 MAP2P11137 1827 aaKnown RBP17.6■□□□□ 0.41
CTCFL-211ENST00000502686 ROBO1Q9Y6N7 1651 aa17.59■□□□□ 0.41
CTCFL-211ENST00000502686 SOS2Q07890 1332 aaPredicted RBP17.59■□□□□ 0.41
CTCFL-211ENST00000502686 TNS3Q68CZ2 1445 aa17.59■□□□□ 0.41
CTCFL-211ENST00000502686 SMG6Q86US8 1419 aaKnown RBP17.59■□□□□ 0.41
CTCFL-211ENST00000502686 PPM1GO15355 546 aaPredicted RBP17.59■□□□□ 0.41
CTCFL-211ENST00000502686 NHSL1Q5SYE7 1610 aa17.58■□□□□ 0.41
CTCFL-211ENST00000502686 SPATA31A3Q5VYP0 1347 aa17.58■□□□□ 0.4
CTCFL-211ENST00000502686 TOM1O60784 492 aa17.57■□□□□ 0.4
CTCFL-211ENST00000502686 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
CTCFL-211ENST00000502686 COL3A1P02461 1466 aaPredicted RBP17.56■□□□□ 0.4
CTCFL-211ENST00000502686 WDR43Q15061 677 aaKnown RBP eCLIP17.56■□□□□ 0.4
CTCFL-211ENST00000502686 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
CTCFL-211ENST00000502686 PNPLA6Q8IY17 1366 aa17.56■□□□□ 0.4
CTCFL-211ENST00000502686 CERKQ8TCT0 537 aa17.55■□□□□ 0.4
CTCFL-211ENST00000502686 USP19O94966 1318 aa17.55■□□□□ 0.4
CTCFL-211ENST00000502686 MAP3K19Q56UN5 1328 aa17.55■□□□□ 0.4
CTCFL-211ENST00000502686 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
CTCFL-211ENST00000502686 CDK12Q9NYV4 1490 aaPredicted RBP17.55■□□□□ 0.4
CTCFL-211ENST00000502686 SLIT3O75094 1523 aa17.55■□□□□ 0.4
CTCFL-211ENST00000502686 UBAP1LF5GYI3 381 aa17.54■□□□□ 0.4
CTCFL-211ENST00000502686 PIP4K2BP78356 416 aa17.54■□□□□ 0.4
CTCFL-211ENST00000502686 SHPRHQ149N8 1683 aa17.54■□□□□ 0.4
CTCFL-211ENST00000502686 NFAT5O94916 1531 aa17.54■□□□□ 0.4
CTCFL-211ENST00000502686 ARHGEF10O15013 1369 aa17.54■□□□□ 0.4
CTCFL-211ENST00000502686 INSRP06213 1382 aa17.54■□□□□ 0.4
CTCFL-211ENST00000502686 KCNH5Q8NCM2 988 aa17.54■□□□□ 0.4
CTCFL-211ENST00000502686 ADAMTS8Q9UP79 889 aa17.54■□□□□ 0.4
CTCFL-211ENST00000502686 PEAK1Q9H792 1746 aa17.53■□□□□ 0.4
CTCFL-211ENST00000502686 MED1Q15648 1581 aaPredicted RBP17.53■□□□□ 0.4
CTCFL-211ENST00000502686 AHDC1Q5TGY3 1603 aaPredicted RBP17.52■□□□□ 0.4
CTCFL-211ENST00000502686 GCP02774 474 aa17.52■□□□□ 0.4
CTCFL-211ENST00000502686 DIAPH1O60610 1272 aaKnown RBP17.52■□□□□ 0.39
CTCFL-211ENST00000502686 AMPHP49418 695 aa17.5■□□□□ 0.39
CTCFL-211ENST00000502686 HNRNPUQ00839 825 aaKnown RBP eCLIP17.5■□□□□ 0.39
CTCFL-211ENST00000502686 CABLES1Q8TDN4 633 aa17.5■□□□□ 0.39
CTCFL-211ENST00000502686 NUDCQ9Y266 331 aa17.5■□□□□ 0.39
CTCFL-211ENST00000502686 FLT4P35916 1363 aa17.49■□□□□ 0.39
CTCFL-211ENST00000502686 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
CTCFL-211ENST00000502686 PHRF1Q9P1Y6 1649 aaKnown RBP17.49■□□□□ 0.39
CTCFL-211ENST00000502686 BLMP54132 1417 aaPredicted RBP17.49■□□□□ 0.39
CTCFL-211ENST00000502686 ZBTB7CA1YPR0 619 aa17.48■□□□□ 0.39
CTCFL-211ENST00000502686 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
CTCFL-211ENST00000502686 LTN1O94822 1766 aa17.48■□□□□ 0.39
CTCFL-211ENST00000502686 IL13P35225 146 aa17.48■□□□□ 0.39
CTCFL-211ENST00000502686 CRYBG1Q9Y4K1 1723 aa17.48■□□□□ 0.39
CTCFL-211ENST00000502686 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
CTCFL-211ENST00000502686 HOXC9P31274 260 aa17.47■□□□□ 0.39
CTCFL-211ENST00000502686 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
CTCFL-211ENST00000502686 KIF24Q5T7B8 1368 aa17.47■□□□□ 0.39
CTCFL-211ENST00000502686 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
CTCFL-211ENST00000502686 ARHGEF25Q86VW2 580 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms