RNA–Protein interactions for RNA: ENST00000502548.5

RACK1-202, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-202ENST00000502548 TESK2Q96S53 571 aa18.27■□□□□ 0.52
RACK1-202ENST00000502548 ATAD2Q6PL18 1390 aa18.27■□□□□ 0.51
RACK1-202ENST00000502548 RBM6P78332 1123 aaKnown RBP18.26■□□□□ 0.51
RACK1-202ENST00000502548 TRPC5Q9UL62 973 aaPredicted RBP18.26■□□□□ 0.51
RACK1-202ENST00000502548 BRD4O60885 1362 aaPredicted RBP18.26■□□□□ 0.51
RACK1-202ENST00000502548 COL22A1Q8NFW1 1626 aaPredicted RBP18.25■□□□□ 0.51
RACK1-202ENST00000502548 RGPD8O14715 1765 aaPredicted RBP18.25■□□□□ 0.51
RACK1-202ENST00000502548 FAM83GA6ND36 823 aa18.24■□□□□ 0.51
RACK1-202ENST00000502548 NUTM2GQ5VZR2 741 aa18.24■□□□□ 0.51
RACK1-202ENST00000502548 UNC5CLQ8IV45 518 aa18.24■□□□□ 0.51
RACK1-202ENST00000502548 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
RACK1-202ENST00000502548 TMC1Q8TDI8 760 aa18.22■□□□□ 0.51
RACK1-202ENST00000502548 USP47Q96K76 1375 aa18.21■□□□□ 0.51
RACK1-202ENST00000502548 SLC12A5Q9H2X9 1139 aa18.21■□□□□ 0.51
RACK1-202ENST00000502548 QRICH2Q9H0J4 1663 aa18.21■□□□□ 0.51
RACK1-202ENST00000502548 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
RACK1-202ENST00000502548 TMF1P82094 1093 aa18.2■□□□□ 0.5
RACK1-202ENST00000502548 USP6P35125 1406 aa18.19■□□□□ 0.5
RACK1-202ENST00000502548 NLRP6P59044 892 aa18.19■□□□□ 0.5
RACK1-202ENST00000502548 GJD4Q96KN9 370 aaPredicted RBP18.19■□□□□ 0.5
RACK1-202ENST00000502548 TTC21BQ7Z4L5 1316 aa18.19■□□□□ 0.5
RACK1-202ENST00000502548 PRDM11Q9NQV5 511 aa18.18■□□□□ 0.5
RACK1-202ENST00000502548 TERF2IPQ9NYB0 399 aa18.18■□□□□ 0.5
RACK1-202ENST00000502548 SLIT2O94813 1529 aa18.18■□□□□ 0.5
RACK1-202ENST00000502548 CPSF1Q10570 1443 aaKnown RBP18.17■□□□□ 0.5
RACK1-202ENST00000502548 SSH2Q76I76 1423 aa18.17■□□□□ 0.5
RACK1-202ENST00000502548 GCP02774 474 aa18.17■□□□□ 0.5
RACK1-202ENST00000502548 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
RACK1-202ENST00000502548 BTG4Q9NY30 223 aa18.17■□□□□ 0.5
RACK1-202ENST00000502548 ATRNO75882 1429 aa18.16■□□□□ 0.5
RACK1-202ENST00000502548 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
RACK1-202ENST00000502548 VPS72Q15906 364 aa18.16■□□□□ 0.5
RACK1-202ENST00000502548 CDCA8Q53HL2 280 aa18.16■□□□□ 0.5
RACK1-202ENST00000502548 TTC21AQ8NDW8 1320 aa18.16■□□□□ 0.5
RACK1-202ENST00000502548 KTN1Q86UP2 1357 aaKnown RBP18.16■□□□□ 0.5
RACK1-202ENST00000502548 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
RACK1-202ENST00000502548 TRPM3Q9HCF6 1732 aaPredicted RBP18.15■□□□□ 0.5
RACK1-202ENST00000502548 USP19O94966 1318 aa18.15■□□□□ 0.5
RACK1-202ENST00000502548 TOPAZ1Q8N9V7 1692 aa18.14■□□□□ 0.49
RACK1-202ENST00000502548 CDK12Q9NYV4 1490 aaPredicted RBP18.14■□□□□ 0.49
RACK1-202ENST00000502548 EIF4G2P78344 907 aaKnown RBP eCLIP18.13■□□□□ 0.49
RACK1-202ENST00000502548 CHRNA2Q15822 529 aa18.13■□□□□ 0.49
RACK1-202ENST00000502548 KIAA0232Q92628 1395 aa18.13■□□□□ 0.49
RACK1-202ENST00000502548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.12■□□□□ 0.49
RACK1-202ENST00000502548 CCDC9Q9Y3X0 531 aaKnown RBP18.12■□□□□ 0.49
RACK1-202ENST00000502548 NINLQ9Y2I6 1382 aa18.12■□□□□ 0.49
RACK1-202ENST00000502548 ALS2Q96Q42 1657 aa18.12■□□□□ 0.49
RACK1-202ENST00000502548 CPDO75976 1380 aa18.1■□□□□ 0.49
RACK1-202ENST00000502548 KCNH5Q8NCM2 988 aa18.1■□□□□ 0.49
RACK1-202ENST00000502548 ONECUT3O60422 494 aaPredicted RBP18.09■□□□□ 0.49
RACK1-202ENST00000502548 EVA1CP58658 441 aa18.09■□□□□ 0.49
RACK1-202ENST00000502548 CD163L1Q9NR16 1453 aa18.07■□□□□ 0.48
RACK1-202ENST00000502548 A0A1W2PP64 1363 aa18.07■□□□□ 0.48
RACK1-202ENST00000502548 HSPA5P11021 654 aaKnown RBP18.07■□□□□ 0.48
RACK1-202ENST00000502548 NME9Q86XW9 330 aa18.07■□□□□ 0.48
RACK1-202ENST00000502548 RGS12O14924 1447 aa18.06■□□□□ 0.48
RACK1-202ENST00000502548 STRN4Q9NRL3 753 aa18.06■□□□□ 0.48
RACK1-202ENST00000502548 ZRANB1Q9UGI0 708 aa18.06■□□□□ 0.48
RACK1-202ENST00000502548 USP31Q70CQ4 1352 aa18.05■□□□□ 0.48
RACK1-202ENST00000502548 SPATA31A5Q5VU36 1347 aa18.05■□□□□ 0.48
RACK1-202ENST00000502548 SPATA31A7Q8IWB4 1347 aa18.05■□□□□ 0.48
RACK1-202ENST00000502548 ARHGEF25Q86VW2 580 aa18.05■□□□□ 0.48
RACK1-202ENST00000502548 SEPT12Q8IYM1 358 aa18.05■□□□□ 0.48
RACK1-202ENST00000502548 EDC4Q6P2E9 1401 aaKnown RBP18.05■□□□□ 0.48
RACK1-202ENST00000502548 ZBTB7CA1YPR0 619 aa18.04■□□□□ 0.48
RACK1-202ENST00000502548 UPF1Q92900 1129 aaKnown RBP eCLIP18.04■□□□□ 0.48
RACK1-202ENST00000502548 SOX12O15370 315 aa18.03■□□□□ 0.48
RACK1-202ENST00000502548 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
RACK1-202ENST00000502548 ANKRD36BQ8N2N9 1353 aa18.03■□□□□ 0.48
RACK1-202ENST00000502548 FAM98CQ17RN3 349 aaKnown RBP18.02■□□□□ 0.48
RACK1-202ENST00000502548 LARP1Q6PKG0 1096 aaKnown RBP18.01■□□□□ 0.47
RACK1-202ENST00000502548 SPATA31A1Q5TZJ5 1347 aa18■□□□□ 0.47
RACK1-202ENST00000502548 COG3Q96JB2 828 aa18■□□□□ 0.47
RACK1-202ENST00000502548 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
RACK1-202ENST00000502548 MARF1Q9Y4F3 1742 aaKnown RBP18■□□□□ 0.47
RACK1-202ENST00000502548 COL14A1Q05707 1796 aaKnown RBP17.99■□□□□ 0.47
RACK1-202ENST00000502548 A0A0G2JS52 829 aa17.99■□□□□ 0.47
RACK1-202ENST00000502548 MYT1Q01538 1121 aa17.99■□□□□ 0.47
RACK1-202ENST00000502548 POLR3GLQ9BT43 218 aa17.99■□□□□ 0.47
RACK1-202ENST00000502548 SLIT3O75094 1523 aa17.98■□□□□ 0.47
RACK1-202ENST00000502548 ABCA3Q99758 1704 aa17.98■□□□□ 0.47
RACK1-202ENST00000502548 FYB1O15117 783 aa17.98■□□□□ 0.47
RACK1-202ENST00000502548 CARD14Q9BXL6 1004 aa17.98■□□□□ 0.47
RACK1-202ENST00000502548 USP35Q9P2H5 1018 aa17.98■□□□□ 0.47
RACK1-202ENST00000502548 BARGINQ6ZT62 677 aa17.97■□□□□ 0.47
RACK1-202ENST00000502548 KRT27Q7Z3Y8 459 aa17.97■□□□□ 0.47
RACK1-202ENST00000502548 TCP11L2Q8N4U5 519 aa17.97■□□□□ 0.47
RACK1-202ENST00000502548 THRAP3Q9Y2W1 955 aaKnown RBP17.97■□□□□ 0.47
RACK1-202ENST00000502548 CAMTA1Q9Y6Y1 1673 aa17.96■□□□□ 0.47
RACK1-202ENST00000502548 NWD2Q9ULI1 1742 aa17.96■□□□□ 0.47
RACK1-202ENST00000502548 CRYBG1Q9Y4K1 1723 aa17.96■□□□□ 0.47
RACK1-202ENST00000502548 GLI3P10071 1580 aa17.96■□□□□ 0.46
RACK1-202ENST00000502548 NRKQ7Z2Y5 1582 aa17.96■□□□□ 0.46
RACK1-202ENST00000502548 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.95■□□□□ 0.46
RACK1-202ENST00000502548 TOM1L2Q6ZVM7 507 aa17.95■□□□□ 0.46
RACK1-202ENST00000502548 PIK3C2AO00443 1686 aa17.94■□□□□ 0.46
RACK1-202ENST00000502548 C11orf95C9JLR9 678 aaPredicted RBP17.94■□□□□ 0.46
RACK1-202ENST00000502548 CCDC125Q86Z20 511 aa17.94■□□□□ 0.46
RACK1-202ENST00000502548 GGNBP2Q9H3C7 697 aa17.94■□□□□ 0.46
RACK1-202ENST00000502548 PHRF1Q9P1Y6 1649 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms