RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 CARD11Q9BXL7 1154 aa20.44■□□□□ 0.86
CLDND1-206ENST00000502299 GPRASP1Q5JY77 1395 aa20.44■□□□□ 0.86
CLDND1-206ENST00000502299 ANKARQ7Z5J8 1434 aa20.43■□□□□ 0.86
CLDND1-206ENST00000502299 CDK19Q9BWU1 502 aa20.42■□□□□ 0.86
CLDND1-206ENST00000502299 ARHGEF10O15013 1369 aa20.42■□□□□ 0.86
CLDND1-206ENST00000502299 CCDC9Q9Y3X0 531 aaKnown RBP20.41■□□□□ 0.86
CLDND1-206ENST00000502299 BRWD3Q6RI45 1802 aa20.41■□□□□ 0.86
CLDND1-206ENST00000502299 PLCH1Q4KWH8 1693 aa20.4■□□□□ 0.86
CLDND1-206ENST00000502299 KRT27Q7Z3Y8 459 aa20.39■□□□□ 0.85
CLDND1-206ENST00000502299 NUDT16Q96DE0 195 aaKnown RBP20.38■□□□□ 0.85
CLDND1-206ENST00000502299 ABCA3Q99758 1704 aa20.38■□□□□ 0.85
CLDND1-206ENST00000502299 TULP4Q9NRJ4 1543 aa20.37■□□□□ 0.85
CLDND1-206ENST00000502299 PRR36Q9H6K5 1346 aa20.37■□□□□ 0.85
CLDND1-206ENST00000502299 NWD2Q9ULI1 1742 aa20.37■□□□□ 0.85
CLDND1-206ENST00000502299 SF3B2Q13435 895 aaKnown RBP20.37■□□□□ 0.85
CLDND1-206ENST00000502299 BTG4Q9NY30 223 aa20.36■□□□□ 0.85
CLDND1-206ENST00000502299 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
CLDND1-206ENST00000502299 CCDC61Q9Y6R9 512 aa20.35■□□□□ 0.85
CLDND1-206ENST00000502299 EVC2Q86UK5 1308 aa20.34■□□□□ 0.85
CLDND1-206ENST00000502299 FAM98CQ17RN3 349 aaKnown RBP20.34■□□□□ 0.85
CLDND1-206ENST00000502299 TRPM3Q9HCF6 1732 aaPredicted RBP20.33■□□□□ 0.84
CLDND1-206ENST00000502299 A0A0G2JS52 829 aa20.32■□□□□ 0.84
CLDND1-206ENST00000502299 MYT1Q01538 1121 aa20.32■□□□□ 0.84
CLDND1-206ENST00000502299 NGDNQ8NEJ9 315 aaKnown RBP20.32■□□□□ 0.84
CLDND1-206ENST00000502299 CABP2Q9NPB3 220 aa20.32■□□□□ 0.84
CLDND1-206ENST00000502299 QRICH2Q9H0J4 1663 aa20.32■□□□□ 0.84
CLDND1-206ENST00000502299 NRAPQ86VF7 1730 aa20.31■□□□□ 0.84
CLDND1-206ENST00000502299 PLEKHG3A1L390 1219 aa20.3■□□□□ 0.84
CLDND1-206ENST00000502299 ATP7BP35670 1465 aa20.3■□□□□ 0.84
CLDND1-206ENST00000502299 ALS2Q96Q42 1657 aa20.29■□□□□ 0.84
CLDND1-206ENST00000502299 SLC24A1O60721 1099 aa20.29■□□□□ 0.84
CLDND1-206ENST00000502299 FAM182BQ5T319 152 aa20.29■□□□□ 0.84
CLDND1-206ENST00000502299 SPATA31A5Q5VU36 1347 aa20.28■□□□□ 0.84
CLDND1-206ENST00000502299 SPATA31A7Q8IWB4 1347 aa20.28■□□□□ 0.84
CLDND1-206ENST00000502299 PSDA5PKW4 1024 aaPredicted RBP20.28■□□□□ 0.84
CLDND1-206ENST00000502299 SBNO2Q9Y2G9 1366 aa20.28■□□□□ 0.84
CLDND1-206ENST00000502299 BAG6P46379 1132 aa20.27■□□□□ 0.84
CLDND1-206ENST00000502299 COL14A1Q05707 1796 aaKnown RBP20.26■□□□□ 0.83
CLDND1-206ENST00000502299 ST20-MTHFSA0A0A6YYL1 179 aa20.26■□□□□ 0.83
CLDND1-206ENST00000502299 ITSN1Q15811 1721 aa20.25■□□□□ 0.83
CLDND1-206ENST00000502299 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-206ENST00000502299 EN1Q05925 392 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-206ENST00000502299 ACEP12821 1306 aa20.25■□□□□ 0.83
CLDND1-206ENST00000502299 PRDM11Q9NQV5 511 aa20.24■□□□□ 0.83
CLDND1-206ENST00000502299 CABP1Q9NZU7 370 aa20.24■□□□□ 0.83
CLDND1-206ENST00000502299 PPIP5K1Q6PFW1 1433 aa20.24■□□□□ 0.83
CLDND1-206ENST00000502299 POLR3AO14802 1390 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-206ENST00000502299 LRP5O75197 1615 aa20.23■□□□□ 0.83
CLDND1-206ENST00000502299 CRYBG1Q9Y4K1 1723 aa20.22■□□□□ 0.83
CLDND1-206ENST00000502299 PUS7Q96PZ0 661 aaKnown RBP20.22■□□□□ 0.83
CLDND1-206ENST00000502299 USP47Q96K76 1375 aa20.21■□□□□ 0.83
CLDND1-206ENST00000502299 TESK2Q96S53 571 aa20.21■□□□□ 0.83
CLDND1-206ENST00000502299 THSD7AQ9UPZ6 1657 aa20.21■□□□□ 0.83
CLDND1-206ENST00000502299 KIAA0232Q92628 1395 aa20.21■□□□□ 0.83
CLDND1-206ENST00000502299 TOPAZ1Q8N9V7 1692 aa20.2■□□□□ 0.82
CLDND1-206ENST00000502299 CHRNA2Q15822 529 aa20.2■□□□□ 0.82
CLDND1-206ENST00000502299 SPATA31A1Q5TZJ5 1347 aa20.2■□□□□ 0.82
CLDND1-206ENST00000502299 NUTM2GQ5VZR2 741 aa20.18■□□□□ 0.82
CLDND1-206ENST00000502299 ZNF692Q9BU19 519 aaPredicted RBP20.18■□□□□ 0.82
CLDND1-206ENST00000502299 DISP2A7MBM2 1401 aa20.18■□□□□ 0.82
CLDND1-206ENST00000502299 ZC3H6P61129 1189 aaKnown RBP20.17■□□□□ 0.82
CLDND1-206ENST00000502299 TMF1P82094 1093 aa20.16■□□□□ 0.82
CLDND1-206ENST00000502299 R3HDM1Q15032 1099 aaKnown RBP20.16■□□□□ 0.82
CLDND1-206ENST00000502299 EZH2Q15910 746 aaKnown RBP20.16■□□□□ 0.82
CLDND1-206ENST00000502299 STRN4Q9NRL3 753 aa20.16■□□□□ 0.82
CLDND1-206ENST00000502299 BRD4O60885 1362 aaPredicted RBP20.16■□□□□ 0.82
CLDND1-206ENST00000502299 RGPD1P0DJD0 1748 aa20.15■□□□□ 0.82
CLDND1-206ENST00000502299 TRIM37O94972 964 aa20.14■□□□□ 0.81
CLDND1-206ENST00000502299 TMC1Q8TDI8 760 aa20.14■□□□□ 0.81
CLDND1-206ENST00000502299 CAMKK2Q96RR4 588 aa20.14■□□□□ 0.81
CLDND1-206ENST00000502299 ABTB2Q8N961 1025 aa20.13■□□□□ 0.81
CLDND1-206ENST00000502299 USP35Q9P2H5 1018 aa20.13■□□□□ 0.81
CLDND1-206ENST00000502299 EIF4G2P78344 907 aaKnown RBP eCLIP20.12■□□□□ 0.81
CLDND1-206ENST00000502299 CDCA8Q53HL2 280 aa20.12■□□□□ 0.81
CLDND1-206ENST00000502299 FAM196AQ6ZSG2 479 aa20.12■□□□□ 0.81
CLDND1-206ENST00000502299 TNS1Q9HBL0 1735 aaKnown RBP20.12■□□□□ 0.81
CLDND1-206ENST00000502299 PHRF1Q9P1Y6 1649 aaKnown RBP20.12■□□□□ 0.81
CLDND1-206ENST00000502299 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
CLDND1-206ENST00000502299 USP6P35125 1406 aa20.1■□□□□ 0.81
CLDND1-206ENST00000502299 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
CLDND1-206ENST00000502299 SSH2Q76I76 1423 aa20.1■□□□□ 0.81
CLDND1-206ENST00000502299 LARP1Q6PKG0 1096 aaKnown RBP20.09■□□□□ 0.81
CLDND1-206ENST00000502299 HDGFL2Q7Z4V5 671 aaPredicted RBP20.09■□□□□ 0.81
CLDND1-206ENST00000502299 NLRP13Q86W25 1043 aa20.09■□□□□ 0.81
CLDND1-206ENST00000502299 CPSF1Q10570 1443 aaKnown RBP20.09■□□□□ 0.81
CLDND1-206ENST00000502299 CAMTA1Q9Y6Y1 1673 aa20.08■□□□□ 0.81
CLDND1-206ENST00000502299 APBA3O96018 575 aa20.08■□□□□ 0.81
CLDND1-206ENST00000502299 EVA1CP58658 441 aa20.08■□□□□ 0.81
CLDND1-206ENST00000502299 TERF2IPQ9NYB0 399 aa20.08■□□□□ 0.81
CLDND1-206ENST00000502299 KTN1Q86UP2 1357 aaKnown RBP20.08■□□□□ 0.8
CLDND1-206ENST00000502299 NRKQ7Z2Y5 1582 aa20.07■□□□□ 0.8
CLDND1-206ENST00000502299 CPDO75976 1380 aa20.07■□□□□ 0.8
CLDND1-206ENST00000502299 NINLQ9Y2I6 1382 aa20.07■□□□□ 0.8
CLDND1-206ENST00000502299 USP19O94966 1318 aa20.06■□□□□ 0.8
CLDND1-206ENST00000502299 TTC21BQ7Z4L5 1316 aa20.05■□□□□ 0.8
CLDND1-206ENST00000502299 TTC21AQ8NDW8 1320 aa20.05■□□□□ 0.8
CLDND1-206ENST00000502299 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
CLDND1-206ENST00000502299 NLRP6P59044 892 aa20.05■□□□□ 0.8
CLDND1-206ENST00000502299 PDE3BQ13370 1112 aa20.05■□□□□ 0.8
CLDND1-206ENST00000502299 TCP11L2Q8N4U5 519 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms