RNA–Protein interactions for RNA: ENST00000498713.1

ANKRD28-214, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 1,091 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-214ENST00000498713 LOC105371045A0A1W2PR82 267 aa10.81□□□□□ -0.68
ANKRD28-214ENST00000498713 KRT76Q01546 638 aa10.81□□□□□ -0.68
ANKRD28-214ENST00000498713 EHBP1Q8NDI1 1231 aa10.81□□□□□ -0.68
ANKRD28-214ENST00000498713 USB1Q9BQ65 265 aaKnown RBP10.81□□□□□ -0.68
ANKRD28-214ENST00000498713 POLA1P09884 1462 aaPredicted RBP10.81□□□□□ -0.68
ANKRD28-214ENST00000498713 KRTAP9-6A0A140TA67 174 aa10.8□□□□□ -0.68
ANKRD28-214ENST00000498713 GRIPAP1Q4V328 841 aa10.8□□□□□ -0.68
ANKRD28-214ENST00000498713 PURBQ96QR8 312 aaKnown RBP10.8□□□□□ -0.68
ANKRD28-214ENST00000498713 THOC2Q8NI27 1593 aaKnown RBP10.8□□□□□ -0.68
ANKRD28-214ENST00000498713 RAD54L2Q9Y4B4 1467 aa10.8□□□□□ -0.68
ANKRD28-214ENST00000498713 WDR62O43379 1518 aa10.79□□□□□ -0.68
ANKRD28-214ENST00000498713 PPFIA3O75145 1194 aa10.79□□□□□ -0.68
ANKRD28-214ENST00000498713 SCARF1Q14162 830 aa10.79□□□□□ -0.68
ANKRD28-214ENST00000498713 ADAM23O75077 832 aa10.78□□□□□ -0.68
ANKRD28-214ENST00000498713 EEA1Q15075 1411 aa10.77□□□□□ -0.68
ANKRD28-214ENST00000498713 IRS1P35568 1242 aa10.77□□□□□ -0.69
ANKRD28-214ENST00000498713 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
ANKRD28-214ENST00000498713 PSMG3-AS1Q96PY0 264 aa10.77□□□□□ -0.69
ANKRD28-214ENST00000498713 CUX2O14529 1486 aa10.76□□□□□ -0.69
ANKRD28-214ENST00000498713 TARBP1Q13395 1621 aaKnown RBP10.76□□□□□ -0.69
ANKRD28-214ENST00000498713 ABCA10Q8WWZ4 1543 aa10.75□□□□□ -0.69
ANKRD28-214ENST00000498713 WDR97A6NE52 1622 aa10.75□□□□□ -0.69
ANKRD28-214ENST00000498713 ZNF385CQ66K41 422 aaPredicted RBP10.74□□□□□ -0.69
ANKRD28-214ENST00000498713 KANK3Q6NY19 840 aa10.74□□□□□ -0.69
ANKRD28-214ENST00000498713 BBXQ8WY36 941 aaPredicted RBP10.74□□□□□ -0.69
ANKRD28-214ENST00000498713 KIF27Q86VH2 1401 aa10.74□□□□□ -0.69
ANKRD28-214ENST00000498713 CNTNAP3BQ96NU0 1288 aa10.72□□□□□ -0.69
ANKRD28-214ENST00000498713 CNTNAP3Q9BZ76 1288 aa10.72□□□□□ -0.69
ANKRD28-214ENST00000498713 IGF1RP08069 1367 aa10.71□□□□□ -0.69
ANKRD28-214ENST00000498713 TIMP2P16035 220 aa10.71□□□□□ -0.69
ANKRD28-214ENST00000498713 GPR161Q8N6U8 529 aaKnown RBP10.71□□□□□ -0.69
ANKRD28-214ENST00000498713 NLRP7Q8WX94 980 aa10.71□□□□□ -0.69
ANKRD28-214ENST00000498713 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
ANKRD28-214ENST00000498713 HIC1Q14526 733 aa10.7□□□□□ -0.7
ANKRD28-214ENST00000498713 ARHGEF1Q92888 912 aaKnown RBP10.7□□□□□ -0.7
ANKRD28-214ENST00000498713 IFT140Q96RY7 1462 aa10.69□□□□□ -0.7
ANKRD28-214ENST00000498713 MAN1A2O60476 641 aa10.69□□□□□ -0.7
ANKRD28-214ENST00000498713 SH3BP2P78314 561 aa10.69□□□□□ -0.7
ANKRD28-214ENST00000498713 NNTQ13423 1086 aa10.69□□□□□ -0.7
ANKRD28-214ENST00000498713 PTCRAQ6ISU1 281 aaPredicted RBP10.69□□□□□ -0.7
ANKRD28-214ENST00000498713 ARHGEF15O94989 841 aa10.68□□□□□ -0.7
ANKRD28-214ENST00000498713 KRTAP1-3Q8IUG1 177 aa10.68□□□□□ -0.7
ANKRD28-214ENST00000498713 SVOPQ8N4V2 548 aa10.68□□□□□ -0.7
ANKRD28-214ENST00000498713 TLL2Q9Y6L7 1015 aa10.68□□□□□ -0.7
ANKRD28-214ENST00000498713 ABCA5Q8WWZ7 1642 aa10.68□□□□□ -0.7
ANKRD28-214ENST00000498713 ADH1CP00326 375 aa10.67□□□□□ -0.7
ANKRD28-214ENST00000498713 SPRYD3Q8NCJ5 442 aa10.67□□□□□ -0.7
ANKRD28-214ENST00000498713 GAPVD1Q14C86 1478 aa10.67□□□□□ -0.7
ANKRD28-214ENST00000498713 JUNDP17535 347 aa10.66□□□□□ -0.7
ANKRD28-214ENST00000498713 MPNDQ8N594 471 aa10.66□□□□□ -0.7
ANKRD28-214ENST00000498713 KLF16Q9BXK1 252 aaPredicted RBP10.66□□□□□ -0.7
ANKRD28-214ENST00000498713 ZNF608Q9ULD9 1512 aaPredicted RBP10.66□□□□□ -0.7
ANKRD28-214ENST00000498713 AQRO60306 1485 aaKnown RBP eCLIP10.66□□□□□ -0.7
ANKRD28-214ENST00000498713 PRXQ9BXM0 1461 aa10.66□□□□□ -0.7
ANKRD28-214ENST00000498713 KIF21BO75037 1637 aa10.66□□□□□ -0.7
ANKRD28-214ENST00000498713 WDR4P57081 412 aaKnown RBP10.65□□□□□ -0.7
ANKRD28-214ENST00000498713 CARMIL1Q5VZK9 1371 aa10.64□□□□□ -0.71
ANKRD28-214ENST00000498713 WHAMMQ8TF30 809 aa10.63□□□□□ -0.71
ANKRD28-214ENST00000498713 COL25A1Q9BXS0 654 aaPredicted RBP10.63□□□□□ -0.71
ANKRD28-214ENST00000498713 PBRM1Q86U86 1689 aa10.63□□□□□ -0.71
ANKRD28-214ENST00000498713 RAPGEF2Q9Y4G8 1499 aa10.62□□□□□ -0.71
ANKRD28-214ENST00000498713 PLEKHG3A1L390 1219 aa10.62□□□□□ -0.71
ANKRD28-214ENST00000498713 MSTNO14793 375 aa10.62□□□□□ -0.71
ANKRD28-214ENST00000498713 SLURP2P0DP57 97 aa10.62□□□□□ -0.71
ANKRD28-214ENST00000498713 ERICH3Q5RHP9 1530 aa10.62□□□□□ -0.71
ANKRD28-214ENST00000498713 SCARF2Q96GP6 870 aaPredicted RBP10.61□□□□□ -0.71
ANKRD28-214ENST00000498713 PHOX2BQ99453 314 aa10.61□□□□□ -0.71
ANKRD28-214ENST00000498713 NUDT12Q9BQG2 462 aa10.61□□□□□ -0.71
ANKRD28-214ENST00000498713 GOLGA3Q08378 1498 aa10.61□□□□□ -0.71
ANKRD28-214ENST00000498713 UBTFP17480 764 aaKnown RBP10.6□□□□□ -0.71
ANKRD28-214ENST00000498713 MARSP56192 900 aaKnown RBP10.6□□□□□ -0.71
ANKRD28-214ENST00000498713 EIF4G3O43432 1585 aaKnown RBP10.6□□□□□ -0.71
ANKRD28-214ENST00000498713 CUL7Q14999 1698 aa10.6□□□□□ -0.71
ANKRD28-214ENST00000498713 RNFT1Q5M7Z0 435 aa10.59□□□□□ -0.71
ANKRD28-214ENST00000498713 HLA-CQ95604 372 aa10.59□□□□□ -0.71
ANKRD28-214ENST00000498713 SPOCK3Q9BQ16 436 aa10.59□□□□□ -0.71
ANKRD28-214ENST00000498713 TNIKQ9UKE5 1360 aa10.59□□□□□ -0.71
ANKRD28-214ENST00000498713 GRIN2BQ13224 1484 aa10.59□□□□□ -0.71
ANKRD28-214ENST00000498713 C6orf118Q5T5N4 469 aa10.58□□□□□ -0.72
ANKRD28-214ENST00000498713 Q8N3U1 123 aa10.58□□□□□ -0.72
ANKRD28-214ENST00000498713 KDM4AO75164 1064 aa10.57□□□□□ -0.72
ANKRD28-214ENST00000498713 CD46P15529 392 aa10.57□□□□□ -0.72
ANKRD28-214ENST00000498713 PLA2G4EQ3MJ16 856 aa10.57□□□□□ -0.72
ANKRD28-214ENST00000498713 NANOS1Q8WY41 292 aaKnown RBP10.57□□□□□ -0.72
ANKRD28-214ENST00000498713 GNPATO15228 680 aa10.56□□□□□ -0.72
ANKRD28-214ENST00000498713 ITGB2P05107 769 aa10.56□□□□□ -0.72
ANKRD28-214ENST00000498713 DNMT3LQ9UJW3 386 aa10.56□□□□□ -0.72
ANKRD28-214ENST00000498713 VARSP26640 1264 aaKnown RBP10.55□□□□□ -0.72
ANKRD28-214ENST00000498713 SOS2Q07890 1332 aaPredicted RBP10.55□□□□□ -0.72
ANKRD28-214ENST00000498713 FHAD1B1AJZ9 1412 aa10.54□□□□□ -0.72
ANKRD28-214ENST00000498713 KCNV2Q8TDN2 545 aa10.54□□□□□ -0.72
ANKRD28-214ENST00000498713 PROCP04070 461 aa10.53□□□□□ -0.72
ANKRD28-214ENST00000498713 ZFAND3Q9H8U3 227 aa10.53□□□□□ -0.72
ANKRD28-214ENST00000498713 USP46P62068 366 aa10.52□□□□□ -0.73
ANKRD28-214ENST00000498713 SNAPC4Q5SXM2 1469 aa10.52□□□□□ -0.73
ANKRD28-214ENST00000498713 ADAMTS12P58397 1594 aa10.52□□□□□ -0.73
ANKRD28-214ENST00000498713 MAGI1Q96QZ7 1491 aaPredicted RBP10.51□□□□□ -0.73
ANKRD28-214ENST00000498713 ZIC2O95409 532 aaPredicted RBP10.51□□□□□ -0.73
ANKRD28-214ENST00000498713 HOXA2O43364 376 aa10.5□□□□□ -0.73
ANKRD28-214ENST00000498713 CCNYL3P0C7X3 344 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms