RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 NBPF1Q3BBV0 1214 aa14.29□□□□□ -0.12
RNF8-208ENST00000498460 CCDC125Q86Z20 511 aa14.29□□□□□ -0.12
RNF8-208ENST00000498460 TOPAZ1Q8N9V7 1692 aa14.29□□□□□ -0.12
RNF8-208ENST00000498460 NRAPQ86VF7 1730 aa14.29□□□□□ -0.12
RNF8-208ENST00000498460 SEPT12Q8IYM1 358 aa14.28□□□□□ -0.12
RNF8-208ENST00000498460 BTG4Q9NY30 223 aa14.28□□□□□ -0.12
RNF8-208ENST00000498460 QRICH2Q9H0J4 1663 aa14.27□□□□□ -0.12
RNF8-208ENST00000498460 A0A0G2JS52 829 aa14.27□□□□□ -0.13
RNF8-208ENST00000498460 MYT1Q01538 1121 aa14.27□□□□□ -0.13
RNF8-208ENST00000498460 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
RNF8-208ENST00000498460 ACEP12821 1306 aa14.25□□□□□ -0.13
RNF8-208ENST00000498460 PHRF1Q9P1Y6 1649 aaKnown RBP14.25□□□□□ -0.13
RNF8-208ENST00000498460 CENPJQ9HC77 1338 aaPredicted RBP14.24□□□□□ -0.13
RNF8-208ENST00000498460 ONECUT3O60422 494 aaPredicted RBP14.24□□□□□ -0.13
RNF8-208ENST00000498460 SRPK2P78362 688 aaKnown RBP14.24□□□□□ -0.13
RNF8-208ENST00000498460 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
RNF8-208ENST00000498460 NUTM2GQ5VZR2 741 aa14.24□□□□□ -0.13
RNF8-208ENST00000498460 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
RNF8-208ENST00000498460 PRDM11Q9NQV5 511 aa14.24□□□□□ -0.13
RNF8-208ENST00000498460 SF3B2Q13435 895 aaKnown RBP14.23□□□□□ -0.13
RNF8-208ENST00000498460 NEUROD1Q13562 356 aa14.23□□□□□ -0.13
RNF8-208ENST00000498460 FAM98CQ17RN3 349 aaKnown RBP14.23□□□□□ -0.13
RNF8-208ENST00000498460 KRT27Q7Z3Y8 459 aa14.23□□□□□ -0.13
RNF8-208ENST00000498460 SIN3AQ96ST3 1273 aa14.23□□□□□ -0.13
RNF8-208ENST00000498460 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
RNF8-208ENST00000498460 TRPM1Q7Z4N2 1603 aa14.23□□□□□ -0.13
RNF8-208ENST00000498460 POLR3AO14802 1390 aaPredicted RBP14.22□□□□□ -0.13
RNF8-208ENST00000498460 PLEKHG3A1L390 1219 aa14.22□□□□□ -0.13
RNF8-208ENST00000498460 BLMP54132 1417 aaPredicted RBP14.22□□□□□ -0.13
RNF8-208ENST00000498460 ZC3H6P61129 1189 aaKnown RBP14.21□□□□□ -0.13
RNF8-208ENST00000498460 ABTB2Q8N961 1025 aa14.21□□□□□ -0.13
RNF8-208ENST00000498460 CABP2Q9NPB3 220 aa14.21□□□□□ -0.13
RNF8-208ENST00000498460 PPIP5K1Q6PFW1 1433 aa14.21□□□□□ -0.13
RNF8-208ENST00000498460 KIAA0232Q92628 1395 aa14.21□□□□□ -0.14
RNF8-208ENST00000498460 CHRNA2Q15822 529 aa14.2□□□□□ -0.14
RNF8-208ENST00000498460 SPATA31A5Q5VU36 1347 aa14.19□□□□□ -0.14
RNF8-208ENST00000498460 SPATA31A7Q8IWB4 1347 aa14.19□□□□□ -0.14
RNF8-208ENST00000498460 STRN4Q9NRL3 753 aa14.18□□□□□ -0.14
RNF8-208ENST00000498460 EVA1CP58658 441 aa14.17□□□□□ -0.14
RNF8-208ENST00000498460 DEFB132Q7Z7B7 95 aa14.17□□□□□ -0.14
RNF8-208ENST00000498460 RGPD1P0DJD0 1748 aa14.17□□□□□ -0.14
RNF8-208ENST00000498460 ROCK2O75116 1388 aaKnown RBP14.17□□□□□ -0.14
RNF8-208ENST00000498460 NLRP13Q86W25 1043 aa14.16□□□□□ -0.14
RNF8-208ENST00000498460 CABP1Q9NZU7 370 aa14.16□□□□□ -0.14
RNF8-208ENST00000498460 NRKQ7Z2Y5 1582 aa14.16□□□□□ -0.14
RNF8-208ENST00000498460 THSD7AQ9UPZ6 1657 aa14.16□□□□□ -0.14
RNF8-208ENST00000498460 EVC2Q86UK5 1308 aa14.15□□□□□ -0.14
RNF8-208ENST00000498460 SPATA31A1Q5TZJ5 1347 aa14.15□□□□□ -0.15
RNF8-208ENST00000498460 AKAP12Q02952 1782 aa14.14□□□□□ -0.15
RNF8-208ENST00000498460 BRD4O60885 1362 aaPredicted RBP14.14□□□□□ -0.15
RNF8-208ENST00000498460 FAM182BQ5T319 152 aa14.14□□□□□ -0.15
RNF8-208ENST00000498460 USP35Q9P2H5 1018 aa14.14□□□□□ -0.15
RNF8-208ENST00000498460 GCP02774 474 aa14.13□□□□□ -0.15
RNF8-208ENST00000498460 BAG6P46379 1132 aa14.13□□□□□ -0.15
RNF8-208ENST00000498460 USP19O94966 1318 aa14.13□□□□□ -0.15
RNF8-208ENST00000498460 LMO7Q8WWI1 1683 aa14.12□□□□□ -0.15
RNF8-208ENST00000498460 CAMTA1Q9Y6Y1 1673 aa14.12□□□□□ -0.15
RNF8-208ENST00000498460 ZBTB7CA1YPR0 619 aa14.12□□□□□ -0.15
RNF8-208ENST00000498460 NLRP6P59044 892 aa14.12□□□□□ -0.15
RNF8-208ENST00000498460 USP6P35125 1406 aa14.12□□□□□ -0.15
RNF8-208ENST00000498460 RGPD5Q99666 1765 aa14.11□□□□□ -0.15
RNF8-208ENST00000498460 CPDO75976 1380 aa14.11□□□□□ -0.15
RNF8-208ENST00000498460 SSH2Q76I76 1423 aa14.11□□□□□ -0.15
RNF8-208ENST00000498460 PIK3C2AO00443 1686 aa14.1□□□□□ -0.15
RNF8-208ENST00000498460 TNS1Q9HBL0 1735 aaKnown RBP14.1□□□□□ -0.15
RNF8-208ENST00000498460 LARP1Q6PKG0 1096 aaKnown RBP14.1□□□□□ -0.15
RNF8-208ENST00000498460 PDE3BQ13370 1112 aa14.09□□□□□ -0.15
RNF8-208ENST00000498460 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
RNF8-208ENST00000498460 EN1Q05925 392 aaPredicted RBP14.08□□□□□ -0.16
RNF8-208ENST00000498460 FAM196AQ6ZSG2 479 aa14.08□□□□□ -0.16
RNF8-208ENST00000498460 BARGINQ6ZT62 677 aa14.08□□□□□ -0.16
RNF8-208ENST00000498460 TCP11L2Q8N4U5 519 aa14.08□□□□□ -0.16
RNF8-208ENST00000498460 CARD11Q9BXL7 1154 aa14.08□□□□□ -0.16
RNF8-208ENST00000498460 TONSLQ96HA7 1378 aa14.08□□□□□ -0.16
RNF8-208ENST00000498460 PARP4Q9UKK3 1724 aaKnown RBP14.07□□□□□ -0.16
RNF8-208ENST00000498460 COL18A1P39060 1754 aa14.06□□□□□ -0.16
RNF8-208ENST00000498460 SLIT3O75094 1523 aa14.06□□□□□ -0.16
RNF8-208ENST00000498460 TRIM37O94972 964 aa14.06□□□□□ -0.16
RNF8-208ENST00000498460 THRAP3Q9Y2W1 955 aaKnown RBP14.06□□□□□ -0.16
RNF8-208ENST00000498460 MON2Q7Z3U7 1717 aa14.06□□□□□ -0.16
RNF8-208ENST00000498460 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
RNF8-208ENST00000498460 KAT6BQ8WYB5 2073 aa14.05□□□□□ -0.16
RNF8-208ENST00000498460 TTC21BQ7Z4L5 1316 aa14.05□□□□□ -0.16
RNF8-208ENST00000498460 KTN1Q86UP2 1357 aaKnown RBP14.05□□□□□ -0.16
RNF8-208ENST00000498460 PSDA5PKW4 1024 aaPredicted RBP14.04□□□□□ -0.16
RNF8-208ENST00000498460 SOX12O15370 315 aa14.04□□□□□ -0.16
RNF8-208ENST00000498460 TTC21AQ8NDW8 1320 aa14.04□□□□□ -0.16
RNF8-208ENST00000498460 AATKQ6ZMQ8 1374 aa14.04□□□□□ -0.16
RNF8-208ENST00000498460 CRB1P82279 1406 aa14.04□□□□□ -0.16
RNF8-208ENST00000498460 SBF2Q86WG5 1849 aa14.04□□□□□ -0.16
RNF8-208ENST00000498460 WNK3Q9BYP7 1800 aa14.04□□□□□ -0.16
RNF8-208ENST00000498460 TOM1L2Q6ZVM7 507 aa14.03□□□□□ -0.16
RNF8-208ENST00000498460 KCNH5Q8NCM2 988 aa14.03□□□□□ -0.16
RNF8-208ENST00000498460 LTN1O94822 1766 aa14.02□□□□□ -0.16
RNF8-208ENST00000498460 CPSF1Q10570 1443 aaKnown RBP14.02□□□□□ -0.16
RNF8-208ENST00000498460 SBNO2Q9Y2G9 1366 aa14.02□□□□□ -0.17
RNF8-208ENST00000498460 APBA3O96018 575 aa14.02□□□□□ -0.17
RNF8-208ENST00000498460 EZH2Q15910 746 aaKnown RBP14.02□□□□□ -0.17
RNF8-208ENST00000498460 TMC1Q8TDI8 760 aa14.02□□□□□ -0.17
RNF8-208ENST00000498460 DISP2A7MBM2 1401 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms