RNA–Protein interactions for RNA: ENST00000498069.5

SCG5-208, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 612 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-208ENST00000498069 ATRNO75882 1429 aa14.34□□□□□ -0.11
SCG5-208ENST00000498069 VPS72Q15906 364 aa14.34□□□□□ -0.11
SCG5-208ENST00000498069 NLRP13Q86W25 1043 aa14.34□□□□□ -0.11
SCG5-208ENST00000498069 UPF1Q92900 1129 aaKnown RBP eCLIP14.34□□□□□ -0.11
SCG5-208ENST00000498069 PRDM11Q9NQV5 511 aa14.34□□□□□ -0.11
SCG5-208ENST00000498069 BTG4Q9NY30 223 aa14.34□□□□□ -0.11
SCG5-208ENST00000498069 ARHGEF28Q8N1W1 1705 aaKnown RBP14.34□□□□□ -0.11
SCG5-208ENST00000498069 SLC24A1O60721 1099 aa14.33□□□□□ -0.12
SCG5-208ENST00000498069 TIMELESSQ9UNS1 1208 aa14.33□□□□□ -0.12
SCG5-208ENST00000498069 ZC3H6P61129 1189 aaKnown RBP14.32□□□□□ -0.12
SCG5-208ENST00000498069 BRD4O60885 1362 aaPredicted RBP14.32□□□□□ -0.12
SCG5-208ENST00000498069 SLIT2O94813 1529 aa14.31□□□□□ -0.12
SCG5-208ENST00000498069 NLRP6P59044 892 aa14.31□□□□□ -0.12
SCG5-208ENST00000498069 CLSPNQ9HAW4 1339 aa14.31□□□□□ -0.12
SCG5-208ENST00000498069 RGS12O14924 1447 aa14.31□□□□□ -0.12
SCG5-208ENST00000498069 EVA1CP58658 441 aa14.3□□□□□ -0.12
SCG5-208ENST00000498069 ATAD2Q6PL18 1390 aa14.3□□□□□ -0.12
SCG5-208ENST00000498069 RGPD8O14715 1765 aaPredicted RBP14.29□□□□□ -0.12
SCG5-208ENST00000498069 GCP02774 474 aa14.29□□□□□ -0.12
SCG5-208ENST00000498069 CHRNA2Q15822 529 aa14.29□□□□□ -0.12
SCG5-208ENST00000498069 CCER1Q8TC90 406 aaPredicted RBP14.29□□□□□ -0.12
SCG5-208ENST00000498069 TMC1Q8TDI8 760 aa14.29□□□□□ -0.12
SCG5-208ENST00000498069 TRPM1Q7Z4N2 1603 aa14.29□□□□□ -0.12
SCG5-208ENST00000498069 ST20-MTHFSA0A0A6YYL1 179 aa14.28□□□□□ -0.12
SCG5-208ENST00000498069 A0A0G2JS52 829 aa14.28□□□□□ -0.12
SCG5-208ENST00000498069 MYT1Q01538 1121 aa14.28□□□□□ -0.12
SCG5-208ENST00000498069 SEPT12Q8IYM1 358 aa14.28□□□□□ -0.12
SCG5-208ENST00000498069 RALGAPBQ86X10 1494 aa14.27□□□□□ -0.12
SCG5-208ENST00000498069 KIAA0232Q92628 1395 aa14.27□□□□□ -0.12
SCG5-208ENST00000498069 SBNO2Q9Y2G9 1366 aa14.27□□□□□ -0.12
SCG5-208ENST00000498069 ONECUT3O60422 494 aaPredicted RBP14.27□□□□□ -0.13
SCG5-208ENST00000498069 HDGFL2Q7Z4V5 671 aaPredicted RBP14.27□□□□□ -0.13
SCG5-208ENST00000498069 PUS7Q96PZ0 661 aaKnown RBP14.27□□□□□ -0.13
SCG5-208ENST00000498069 STRN4Q9NRL3 753 aa14.27□□□□□ -0.13
SCG5-208ENST00000498069 USP6P35125 1406 aa14.25□□□□□ -0.13
SCG5-208ENST00000498069 TTC21BQ7Z4L5 1316 aa14.25□□□□□ -0.13
SCG5-208ENST00000498069 ZBTB7CA1YPR0 619 aa14.25□□□□□ -0.13
SCG5-208ENST00000498069 FAM98CQ17RN3 349 aaKnown RBP14.25□□□□□ -0.13
SCG5-208ENST00000498069 CCDC125Q86Z20 511 aa14.25□□□□□ -0.13
SCG5-208ENST00000498069 KTN1Q86UP2 1357 aaKnown RBP14.24□□□□□ -0.13
SCG5-208ENST00000498069 USP19O94966 1318 aa14.24□□□□□ -0.13
SCG5-208ENST00000498069 TTC21AQ8NDW8 1320 aa14.24□□□□□ -0.13
SCG5-208ENST00000498069 KCNH5Q8NCM2 988 aa14.24□□□□□ -0.13
SCG5-208ENST00000498069 SLC12A5Q9H2X9 1139 aa14.24□□□□□ -0.13
SCG5-208ENST00000498069 TERF2IPQ9NYB0 399 aa14.24□□□□□ -0.13
SCG5-208ENST00000498069 TRPM3Q9HCF6 1732 aaPredicted RBP14.24□□□□□ -0.13
SCG5-208ENST00000498069 SPATA31A5Q5VU36 1347 aa14.23□□□□□ -0.13
SCG5-208ENST00000498069 SPATA31A7Q8IWB4 1347 aa14.23□□□□□ -0.13
SCG5-208ENST00000498069 KRT27Q7Z3Y8 459 aa14.23□□□□□ -0.13
SCG5-208ENST00000498069 ITSN1Q15811 1721 aa14.23□□□□□ -0.13
SCG5-208ENST00000498069 QRICH2Q9H0J4 1663 aa14.23□□□□□ -0.13
SCG5-208ENST00000498069 TMF1P82094 1093 aa14.22□□□□□ -0.13
SCG5-208ENST00000498069 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.22□□□□□ -0.13
SCG5-208ENST00000498069 TESK2Q96S53 571 aa14.22□□□□□ -0.13
SCG5-208ENST00000498069 ALS2Q96Q42 1657 aa14.21□□□□□ -0.13
SCG5-208ENST00000498069 USP35Q9P2H5 1018 aa14.21□□□□□ -0.13
SCG5-208ENST00000498069 SSH2Q76I76 1423 aa14.21□□□□□ -0.13
SCG5-208ENST00000498069 CPDO75976 1380 aa14.21□□□□□ -0.14
SCG5-208ENST00000498069 SOX12O15370 315 aa14.2□□□□□ -0.14
SCG5-208ENST00000498069 SF3B2Q13435 895 aaKnown RBP14.2□□□□□ -0.14
SCG5-208ENST00000498069 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
SCG5-208ENST00000498069 CPSF1Q10570 1443 aaKnown RBP14.2□□□□□ -0.14
SCG5-208ENST00000498069 SPATA31A1Q5TZJ5 1347 aa14.19□□□□□ -0.14
SCG5-208ENST00000498069 TOPAZ1Q8N9V7 1692 aa14.19□□□□□ -0.14
SCG5-208ENST00000498069 LARP1Q6PKG0 1096 aaKnown RBP14.18□□□□□ -0.14
SCG5-208ENST00000498069 USP47Q96K76 1375 aa14.18□□□□□ -0.14
SCG5-208ENST00000498069 TCP11L2Q8N4U5 519 aa14.17□□□□□ -0.14
SCG5-208ENST00000498069 THRAP3Q9Y2W1 955 aaKnown RBP14.17□□□□□ -0.14
SCG5-208ENST00000498069 MARF1Q9Y4F3 1742 aaKnown RBP14.17□□□□□ -0.14
SCG5-208ENST00000498069 GLI3P10071 1580 aa14.17□□□□□ -0.14
SCG5-208ENST00000498069 COL14A1Q05707 1796 aaKnown RBP14.17□□□□□ -0.14
SCG5-208ENST00000498069 BARGINQ6ZT62 677 aa14.16□□□□□ -0.14
SCG5-208ENST00000498069 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
SCG5-208ENST00000498069 NME9Q86XW9 330 aa14.16□□□□□ -0.14
SCG5-208ENST00000498069 ZRANB1Q9UGI0 708 aa14.16□□□□□ -0.14
SCG5-208ENST00000498069 AATKQ6ZMQ8 1374 aa14.16□□□□□ -0.14
SCG5-208ENST00000498069 NINLQ9Y2I6 1382 aa14.16□□□□□ -0.14
SCG5-208ENST00000498069 CSB-PGBD3P0DP91 1061 aa14.15□□□□□ -0.14
SCG5-208ENST00000498069 PDE3BQ13370 1112 aa14.15□□□□□ -0.14
SCG5-208ENST00000498069 TOM1L2Q6ZVM7 507 aa14.15□□□□□ -0.14
SCG5-208ENST00000498069 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.15□□□□□ -0.14
SCG5-208ENST00000498069 AXIN2Q9Y2T1 843 aa14.14□□□□□ -0.15
SCG5-208ENST00000498069 NWD2Q9ULI1 1742 aa14.13□□□□□ -0.15
SCG5-208ENST00000498069 ABCA3Q99758 1704 aa14.12□□□□□ -0.15
SCG5-208ENST00000498069 A0A1W2PP64 1363 aa14.12□□□□□ -0.15
SCG5-208ENST00000498069 USP31Q70CQ4 1352 aa14.12□□□□□ -0.15
SCG5-208ENST00000498069 PLCH1Q4KWH8 1693 aa14.12□□□□□ -0.15
SCG5-208ENST00000498069 FAM182BQ5T319 152 aa14.12□□□□□ -0.15
SCG5-208ENST00000498069 FAM196AQ6ZSG2 479 aa14.12□□□□□ -0.15
SCG5-208ENST00000498069 COG3Q96JB2 828 aa14.12□□□□□ -0.15
SCG5-208ENST00000498069 BLMP54132 1417 aaPredicted RBP14.12□□□□□ -0.15
SCG5-208ENST00000498069 EDC4Q6P2E9 1401 aaKnown RBP14.12□□□□□ -0.15
SCG5-208ENST00000498069 CAMTA1Q9Y6Y1 1673 aa14.11□□□□□ -0.15
SCG5-208ENST00000498069 EIF4G2P78344 907 aaKnown RBP eCLIP14.11□□□□□ -0.15
SCG5-208ENST00000498069 CD163L1Q9NR16 1453 aa14.11□□□□□ -0.15
SCG5-208ENST00000498069 BAG6P46379 1132 aa14.1□□□□□ -0.15
SCG5-208ENST00000498069 WDR17Q8IZU2 1322 aa14.1□□□□□ -0.15
SCG5-208ENST00000498069 SLIT3O75094 1523 aa14.1□□□□□ -0.15
SCG5-208ENST00000498069 NRKQ7Z2Y5 1582 aa14.09□□□□□ -0.15
SCG5-208ENST00000498069 CRB1P82279 1406 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms