RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 PRR7Q8TB68 274 aa8.6□□□□□ -1.03
PHC3-216ENST00000497171 PCDHGC3Q9UN70 934 aa8.6□□□□□ -1.03
PHC3-216ENST00000497171 VSIG8P0DPA2 414 aa8.59□□□□□ -1.03
PHC3-216ENST00000497171 CTHP32929 405 aa8.59□□□□□ -1.03
PHC3-216ENST00000497171 MTMR2Q13614 643 aa8.58□□□□□ -1.04
PHC3-216ENST00000497171 DESI1Q6ICB0 168 aa8.58□□□□□ -1.04
PHC3-216ENST00000497171 ARID5BQ14865 1188 aa8.57□□□□□ -1.04
PHC3-216ENST00000497171 TTLL12Q14166 644 aaPredicted RBP8.56□□□□□ -1.04
PHC3-216ENST00000497171 LOC100996750A0A140TA64 210 aa8.55□□□□□ -1.04
PHC3-216ENST00000497171 SOBPA7XYQ1 873 aa8.55□□□□□ -1.04
PHC3-216ENST00000497171 ZIC2O95409 532 aaPredicted RBP8.55□□□□□ -1.04
PHC3-216ENST00000497171 SSTR3P32745 418 aaPredicted RBP8.55□□□□□ -1.04
PHC3-216ENST00000497171 AGERQ15109 404 aa8.55□□□□□ -1.04
PHC3-216ENST00000497171 C6orf118Q5T5N4 469 aa8.55□□□□□ -1.04
PHC3-216ENST00000497171 SPIRE2Q8WWL2 714 aa8.55□□□□□ -1.04
PHC3-216ENST00000497171 KRTAP4-6Q9BYQ5 205 aa8.55□□□□□ -1.04
PHC3-216ENST00000497171 RNF225M0QZC1 329 aaPredicted RBP8.54□□□□□ -1.04
PHC3-216ENST00000497171 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
PHC3-216ENST00000497171 NR5A1Q13285 461 aa8.54□□□□□ -1.04
PHC3-216ENST00000497171 MOXD2PA6NHM9 499 aa8.53□□□□□ -1.04
PHC3-216ENST00000497171 BMP2P12643 396 aa8.53□□□□□ -1.04
PHC3-216ENST00000497171 NDUFV2P19404 249 aa8.53□□□□□ -1.04
PHC3-216ENST00000497171 KCNMA1Q12791 1236 aa8.53□□□□□ -1.04
PHC3-216ENST00000497171 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
PHC3-216ENST00000497171 SPTLC1O15269 473 aa8.52□□□□□ -1.05
PHC3-216ENST00000497171 CDK15Q96Q40 435 aa8.52□□□□□ -1.05
PHC3-216ENST00000497171 PPFIA3O75145 1194 aa8.5□□□□□ -1.05
PHC3-216ENST00000497171 SUZ12Q15022 739 aaKnown RBP8.5□□□□□ -1.05
PHC3-216ENST00000497171 BPHLQ86WA6 291 aaPredicted RBP8.5□□□□□ -1.05
PHC3-216ENST00000497171 LINC00528Q8N1L1 170 aa8.5□□□□□ -1.05
PHC3-216ENST00000497171 ITPKCQ96DU7 683 aa8.5□□□□□ -1.05
PHC3-216ENST00000497171 KLF16Q9BXK1 252 aaPredicted RBP8.5□□□□□ -1.05
PHC3-216ENST00000497171 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
PHC3-216ENST00000497171 GJA5P36382 358 aa8.49□□□□□ -1.05
PHC3-216ENST00000497171 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
PHC3-216ENST00000497171 TMEM151AQ8N4L1 468 aa8.49□□□□□ -1.05
PHC3-216ENST00000497171 KCTD17Q8N5Z5 321 aa8.49□□□□□ -1.05
PHC3-216ENST00000497171 FOXJ1Q92949 421 aa8.48□□□□□ -1.05
PHC3-216ENST00000497171 MEIOBQ8N635 442 aa8.47□□□□□ -1.05
PHC3-216ENST00000497171 ZBTB3Q9H5J0 574 aa8.47□□□□□ -1.05
PHC3-216ENST00000497171 GDF11O95390 407 aa8.46□□□□□ -1.06
PHC3-216ENST00000497171 ARMC2Q8NEN0 867 aa8.46□□□□□ -1.06
PHC3-216ENST00000497171 TSEN34Q9BSV6 310 aaKnown RBP8.46□□□□□ -1.06
PHC3-216ENST00000497171 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.45□□□□□ -1.06
PHC3-216ENST00000497171 BEGAINQ9BUH8 593 aa8.45□□□□□ -1.06
PHC3-216ENST00000497171 MAP10Q9P2G4 905 aa8.45□□□□□ -1.06
PHC3-216ENST00000497171 NR3C2P08235 984 aa8.44□□□□□ -1.06
PHC3-216ENST00000497171 RASSF7Q02833 373 aa8.44□□□□□ -1.06
PHC3-216ENST00000497171 RSBN1LQ6PCB5 846 aaPredicted RBP8.44□□□□□ -1.06
PHC3-216ENST00000497171 GIGYF2Q6Y7W6 1299 aaKnown RBP8.44□□□□□ -1.06
PHC3-216ENST00000497171 F12P00748 615 aaPredicted RBP8.43□□□□□ -1.06
PHC3-216ENST00000497171 FSHRP23945 695 aa8.43□□□□□ -1.06
PHC3-216ENST00000497171 AMHR2Q16671 573 aa8.43□□□□□ -1.06
PHC3-216ENST00000497171 NBPF14Q5TI25 921 aa8.43□□□□□ -1.06
PHC3-216ENST00000497171 TBC1D2Q9BYX2 928 aa8.43□□□□□ -1.06
PHC3-216ENST00000497171 EMILIN1Q9Y6C2 1016 aa8.43□□□□□ -1.06
PHC3-216ENST00000497171 SOS2Q07890 1332 aaPredicted RBP8.43□□□□□ -1.06
PHC3-216ENST00000497171 CFAP99D6REC4 459 aa8.42□□□□□ -1.06
PHC3-216ENST00000497171 VASH1Q7L8A9 365 aaPredicted RBP8.42□□□□□ -1.06
PHC3-216ENST00000497171 TSC1Q92574 1164 aa8.42□□□□□ -1.06
PHC3-216ENST00000497171 CNTNAP3BQ96NU0 1288 aa8.42□□□□□ -1.06
PHC3-216ENST00000497171 CNTNAP3Q9BZ76 1288 aa8.42□□□□□ -1.06
PHC3-216ENST00000497171 DNMT3LQ9UJW3 386 aa8.42□□□□□ -1.06
PHC3-216ENST00000497171 TTLL8A6PVC2 850 aa8.41□□□□□ -1.06
PHC3-216ENST00000497171 GRM5P41594 1212 aa8.41□□□□□ -1.06
PHC3-216ENST00000497171 PRPF38BQ5VTL8 546 aaKnown RBP8.41□□□□□ -1.06
PHC3-216ENST00000497171 SVOPQ8N4V2 548 aa8.41□□□□□ -1.06
PHC3-216ENST00000497171 ADAMTS8Q9UP79 889 aa8.41□□□□□ -1.06
PHC3-216ENST00000497171 HRCP23327 699 aa8.4□□□□□ -1.06
PHC3-216ENST00000497171 KDM2AQ9Y2K7 1162 aa8.4□□□□□ -1.06
PHC3-216ENST00000497171 MAP4K5Q9Y4K4 846 aa8.4□□□□□ -1.06
PHC3-216ENST00000497171 CCDC116Q8IYX3 515 aa8.39□□□□□ -1.07
PHC3-216ENST00000497171 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
PHC3-216ENST00000497171 PGPEP1Q9NXJ5 209 aa8.38□□□□□ -1.07
PHC3-216ENST00000497171 MAGEB6P1A0A0J9YX57 407 aa8.37□□□□□ -1.07
PHC3-216ENST00000497171 NUTM2BA6NNL0 878 aaPredicted RBP8.37□□□□□ -1.07
PHC3-216ENST00000497171 NUTM2EB1AL46 878 aaPredicted RBP8.37□□□□□ -1.07
PHC3-216ENST00000497171 GSK3AP49840 483 aa8.37□□□□□ -1.07
PHC3-216ENST00000497171 PTSQ03393 145 aa8.37□□□□□ -1.07
PHC3-216ENST00000497171 CSPP1Q1MSJ5 1256 aa8.37□□□□□ -1.07
PHC3-216ENST00000497171 NUTM2DQ5VT03 806 aaPredicted RBP8.37□□□□□ -1.07
PHC3-216ENST00000497171 RIC3Q7Z5B4 369 aa8.37□□□□□ -1.07
PHC3-216ENST00000497171 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
PHC3-216ENST00000497171 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
PHC3-216ENST00000497171 COL25A1Q9BXS0 654 aaPredicted RBP8.37□□□□□ -1.07
PHC3-216ENST00000497171 PCDHB15Q9Y5E8 787 aa8.37□□□□□ -1.07
PHC3-216ENST00000497171 MARSP56192 900 aaKnown RBP8.36□□□□□ -1.07
PHC3-216ENST00000497171 TRMT44Q8IYL2 757 aaKnown RBP8.36□□□□□ -1.07
PHC3-216ENST00000497171 C1QTNF2Q9BXJ5 285 aa8.36□□□□□ -1.07
PHC3-216ENST00000497171 IGHA1P01876 353 aa8.35□□□□□ -1.07
PHC3-216ENST00000497171 KRT76Q01546 638 aa8.35□□□□□ -1.07
PHC3-216ENST00000497171 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
PHC3-216ENST00000497171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.35□□□□□ -1.07
PHC3-216ENST00000497171 DNMT3AQ9Y6K1 912 aaPredicted RBP8.35□□□□□ -1.07
PHC3-216ENST00000497171 FIGNL2A6NMB9 653 aa8.34□□□□□ -1.07
PHC3-216ENST00000497171 KANK3Q6NY19 840 aa8.34□□□□□ -1.07
PHC3-216ENST00000497171 VSIG10Q8N0Z9 540 aa8.34□□□□□ -1.07
PHC3-216ENST00000497171 GPR161Q8N6U8 529 aaKnown RBP8.34□□□□□ -1.07
PHC3-216ENST00000497171 CABLES1Q8TDN4 633 aa8.34□□□□□ -1.07
PHC3-216ENST00000497171 NANOS1Q8WY41 292 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms