RNA–Protein interactions for RNA: ENST00000496856.5

ZNF639-209, Transcript of zinc finger protein 639, human

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF639, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF639-209	ENST00000496856	RBM33	Q96EV2	1170 aa	Known RBP	33.19	■■■□□ 2.9
ZNF639-209	ENST00000496856	NKTR	P30414	1462 aa	Known RBP	33.18	■■■□□ 2.9
ZNF639-209	ENST00000496856	FBLN1	P23142	703 aa		33.18	■■■□□ 2.9
ZNF639-209	ENST00000496856	TTC21B	Q7Z4L5	1316 aa		33.18	■■■□□ 2.9
ZNF639-209	ENST00000496856	IRX6	P78412	446 aa	Predicted RBP	33.17	■■■□□ 2.9
ZNF639-209	ENST00000496856	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.16	■■■□□ 2.9
ZNF639-209	ENST00000496856	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.16	■■■□□ 2.9
ZNF639-209	ENST00000496856	NGDN	Q8NEJ9	315 aa	Known RBP	33.16	■■■□□ 2.9
ZNF639-209	ENST00000496856	POLK	Q9UBT6	870 aa		33.16	■■■□□ 2.9
ZNF639-209	ENST00000496856	RUNDC1	Q96C34	613 aa		33.15	■■■□□ 2.9
ZNF639-209	ENST00000496856	PPM1G	O15355	546 aa	Predicted RBP	33.14	■■■□□ 2.9
ZNF639-209	ENST00000496856	USP6	P35125	1406 aa		33.14	■■■□□ 2.9
ZNF639-209	ENST00000496856	ANKAR	Q7Z5J8	1434 aa		33.13	■■■□□ 2.89
ZNF639-209	ENST00000496856	U2SURP	O15042	1029 aa	Known RBP	33.12	■■■□□ 2.89
ZNF639-209	ENST00000496856	ZNF521	Q96K83	1311 aa		33.12	■■■□□ 2.89
ZNF639-209	ENST00000496856	NGEF	Q8N5V2	710 aa		33.11	■■■□□ 2.89
ZNF639-209	ENST00000496856	RGPD8	O14715	1765 aa	Predicted RBP	33.11	■■■□□ 2.89
ZNF639-209	ENST00000496856	DIAPH1	O60610	1272 aa	Known RBP	33.11	■■■□□ 2.89
ZNF639-209	ENST00000496856	PNPLA6	Q8IY17	1366 aa		33.1	■■■□□ 2.89
ZNF639-209	ENST00000496856	COL3A1	P02461	1466 aa	Predicted RBP	33.1	■■■□□ 2.89
ZNF639-209	ENST00000496856	GOLGA2	Q08379	1002 aa		33.09	■■■□□ 2.89
ZNF639-209	ENST00000496856	C14orf37	Q86TY3	774 aa		33.09	■■■□□ 2.89
ZNF639-209	ENST00000496856	KDM4F	A0A1W2PPD8	638 aa		33.08	■■■□□ 2.89
ZNF639-209	ENST00000496856	FMN2	Q9NZ56	1722 aa		33.07	■■■□□ 2.88
ZNF639-209	ENST00000496856	AATK	Q6ZMQ8	1374 aa		33.07	■■■□□ 2.88
ZNF639-209	ENST00000496856	EMILIN1	Q9Y6C2	1016 aa		33.06	■■■□□ 2.88
ZNF639-209	ENST00000496856	NALCN	Q8IZF0	1738 aa		33.06	■■■□□ 2.88
ZNF639-209	ENST00000496856	TCP11L2	Q8N4U5	519 aa		33.06	■■■□□ 2.88
ZNF639-209	ENST00000496856	NRK	Q7Z2Y5	1582 aa		33.05	■■■□□ 2.88
ZNF639-209	ENST00000496856	SSH2	Q76I76	1423 aa		33.05	■■■□□ 2.88
ZNF639-209	ENST00000496856	MAP2	P11137	1827 aa	Known RBP	33.04	■■■□□ 2.88
ZNF639-209	ENST00000496856	HSPA2	P54652	639 aa		33.04	■■■□□ 2.88
ZNF639-209	ENST00000496856	ADGRL3	Q9HAR2	1447 aa		33.04	■■■□□ 2.88
ZNF639-209	ENST00000496856	RCAN3	Q9UKA8	241 aa		33.04	■■■□□ 2.88
ZNF639-209	ENST00000496856	TTC21A	Q8NDW8	1320 aa		33.03	■■■□□ 2.88
ZNF639-209	ENST00000496856	NEUROD2	Q15784	382 aa		33.03	■■■□□ 2.88
ZNF639-209	ENST00000496856	PROSER2	Q86WR7	435 aa	Predicted RBP	33.02	■■■□□ 2.88
ZNF639-209	ENST00000496856	RNF123	Q5XPI4	1314 aa		33.02	■■■□□ 2.88
ZNF639-209	ENST00000496856	RRS1	Q15050	365 aa	Known RBP	33.02	■■■□□ 2.88
ZNF639-209	ENST00000496856	RRP7A	Q9Y3A4	280 aa	Known RBP	33.02	■■■□□ 2.88
ZNF639-209	ENST00000496856	SLFN5	Q08AF3	891 aa		32.99	■■■□□ 2.87
ZNF639-209	ENST00000496856	ERICH6B	Q5W0A0	696 aa		32.99	■■■□□ 2.87
ZNF639-209	ENST00000496856	PHF8	Q9UPP1	1060 aa		32.99	■■■□□ 2.87
ZNF639-209	ENST00000496856	NWD1	Q149M9	1564 aa		32.98	■■■□□ 2.87
ZNF639-209	ENST00000496856	DUSP27	Q5VZP5	1158 aa		32.98	■■■□□ 2.87
ZNF639-209	ENST00000496856	WWC1	Q8IX03	1113 aa		32.98	■■■□□ 2.87
ZNF639-209	ENST00000496856	OVOS2	A0A0J9YW53	1432 aa		32.97	■■■□□ 2.87
ZNF639-209	ENST00000496856	OVOS2	Q6IE36	1432 aa		32.97	■■■□□ 2.87
ZNF639-209	ENST00000496856	IQSEC2	Q5JU85	1478 aa		32.95	■■■□□ 2.87
ZNF639-209	ENST00000496856	PLEKHF1	Q96S99	279 aa		32.95	■■■□□ 2.87
ZNF639-209	ENST00000496856	ESCO1	Q5FWF5	840 aa		32.94	■■■□□ 2.86
ZNF639-209	ENST00000496856	PNN	Q9H307	717 aa	Known RBP	32.94	■■■□□ 2.86
ZNF639-209	ENST00000496856	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.94	■■■□□ 2.86
ZNF639-209	ENST00000496856	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.94	■■■□□ 2.86
ZNF639-209	ENST00000496856		E9PSI1	815 aa		32.92	■■■□□ 2.86
ZNF639-209	ENST00000496856	TRMT2A	Q8IZ69	625 aa	Known RBP	32.92	■■■□□ 2.86
ZNF639-209	ENST00000496856	DMRT2	Q9Y5R5	561 aa		32.92	■■■□□ 2.86
ZNF639-209	ENST00000496856	MAPK8IP3	Q9UPT6	1336 aa		32.92	■■■□□ 2.86
ZNF639-209	ENST00000496856	USP31	Q70CQ4	1352 aa		32.91	■■■□□ 2.86
ZNF639-209	ENST00000496856	SOX12	O15370	315 aa		32.91	■■■□□ 2.86
ZNF639-209	ENST00000496856	IL13	P35225	146 aa		32.91	■■■□□ 2.86
ZNF639-209	ENST00000496856	FCHSD2	O94868	740 aa		32.9	■■■□□ 2.86
ZNF639-209	ENST00000496856	PAK3	O75914	559 aa	Predicted RBP	32.9	■■■□□ 2.86
ZNF639-209	ENST00000496856	CCDC27	Q2M243	656 aa		32.89	■■■□□ 2.86
ZNF639-209	ENST00000496856	NCBP3	Q53F19	620 aa	Known RBP	32.89	■■■□□ 2.86
ZNF639-209	ENST00000496856	NLRP6	P59044	892 aa		32.89	■■■□□ 2.85
ZNF639-209	ENST00000496856	PHF23	Q9BUL5	403 aa	Predicted RBP	32.89	■■■□□ 2.85
ZNF639-209	ENST00000496856	RRP1	P56182	461 aa	Known RBP	32.88	■■■□□ 2.85
ZNF639-209	ENST00000496856	C19orf44	Q9H6X5	657 aa		32.87	■■■□□ 2.85
ZNF639-209	ENST00000496856	ABTB2	Q8N961	1025 aa		32.86	■■■□□ 2.85
ZNF639-209	ENST00000496856	PSME1	Q06323	249 aa		32.85	■■■□□ 2.85
ZNF639-209	ENST00000496856	WDR63	Q8IWG1	891 aa		32.85	■■■□□ 2.85
ZNF639-209	ENST00000496856	TMPO	P42166	694 aa	Known RBP	32.85	■■■□□ 2.85
ZNF639-209	ENST00000496856	HMOX1	P09601	288 aa		32.84	■■■□□ 2.85
ZNF639-209	ENST00000496856	NUTM2G	Q5VZR2	741 aa		32.84	■■■□□ 2.85
ZNF639-209	ENST00000496856	RSPH6A	Q9H0K4	717 aa		32.84	■■■□□ 2.85
ZNF639-209	ENST00000496856	PPP4R2	Q9NY27	417 aa		32.84	■■■□□ 2.85
ZNF639-209	ENST00000496856	PRKAR2B	P31323	418 aa		32.83	■■■□□ 2.85
ZNF639-209	ENST00000496856	ORAI2	Q96SN7	254 aa		32.83	■■■□□ 2.85
ZNF639-209	ENST00000496856	LMTK3	Q96Q04	1460 aa		32.82	■■■□□ 2.85
ZNF639-209	ENST00000496856	NEFM	P07197	916 aa		32.82	■■■□□ 2.84
ZNF639-209	ENST00000496856	PIK3C2A	O00443	1686 aa		32.82	■■■□□ 2.84
ZNF639-209	ENST00000496856	TMEM94	Q12767	1356 aa		32.79	■■■□□ 2.84
ZNF639-209	ENST00000496856	MAP3K19	Q56UN5	1328 aa		32.78	■■■□□ 2.84
ZNF639-209	ENST00000496856	RIPK4	P57078	832 aa		32.78	■■■□□ 2.84
ZNF639-209	ENST00000496856	EIF4A2	Q14240	407 aa	Known RBP	32.78	■■■□□ 2.84
ZNF639-209	ENST00000496856	HSP90AB2P	Q58FF8	381 aa		32.78	■■■□□ 2.84
ZNF639-209	ENST00000496856	LRRC7	Q96NW7	1537 aa		32.76	■■■□□ 2.84
ZNF639-209	ENST00000496856	FOXO3	O43524	673 aa		32.76	■■■□□ 2.83
ZNF639-209	ENST00000496856	ATF3	P18847	181 aa		32.76	■■■□□ 2.83
ZNF639-209	ENST00000496856	TRIM35	Q9UPQ4	493 aa		32.75	■■■□□ 2.83
ZNF639-209	ENST00000496856	STRCP1	A6NGW2	1772 aa		32.74	■■■□□ 2.83
ZNF639-209	ENST00000496856	AMPH	P49418	695 aa		32.73	■■■□□ 2.83
ZNF639-209	ENST00000496856	PHACTR3	Q96KR7	559 aa		32.73	■■■□□ 2.83
ZNF639-209	ENST00000496856	PLIN1	O60240	522 aa		32.72	■■■□□ 2.83
ZNF639-209	ENST00000496856	PEAK1	Q9H792	1746 aa		32.72	■■■□□ 2.83
ZNF639-209	ENST00000496856	SBNO1	A3KN83	1393 aa		32.71	■■■□□ 2.83
ZNF639-209	ENST00000496856	C1orf167	Q5SNV9	1468 aa		32.71	■■■□□ 2.83
ZNF639-209	ENST00000496856	NCOA3	Q9Y6Q9	1424 aa		32.71	■■■□□ 2.83
ZNF639-209	ENST00000496856	FLT4	P35916	1363 aa		32.7	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms