RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
CD46-218ENST00000496723 PRPF38BQ5VTL8 546 aaKnown RBP9.14□□□□□ -0.95
CD46-218ENST00000496723 PARP9Q8IXQ6 854 aa9.14□□□□□ -0.95
CD46-218ENST00000496723 TRIM66O15016 1216 aa9.13□□□□□ -0.95
CD46-218ENST00000496723 NPAS3Q8IXF0 933 aa9.13□□□□□ -0.95
CD46-218ENST00000496723 AK7Q96M32 723 aa9.13□□□□□ -0.95
CD46-218ENST00000496723 ZBTB3Q9H5J0 574 aa9.13□□□□□ -0.95
CD46-218ENST00000496723 TRIM46Q7Z4K8 759 aa9.12□□□□□ -0.95
CD46-218ENST00000496723 SLC16A10Q8TF71 515 aa9.12□□□□□ -0.95
CD46-218ENST00000496723 CTHP32929 405 aa9.11□□□□□ -0.95
CD46-218ENST00000496723 NXF1Q9UBU9 619 aaKnown RBP9.11□□□□□ -0.95
CD46-218ENST00000496723 PCDHB15Q9Y5E8 787 aa9.11□□□□□ -0.95
CD46-218ENST00000496723 BMP1P13497 986 aa9.1□□□□□ -0.95
CD46-218ENST00000496723 HRCP23327 699 aa9.1□□□□□ -0.95
CD46-218ENST00000496723 RIC3Q7Z5B4 369 aa9.1□□□□□ -0.95
CD46-218ENST00000496723 FAM174AQ8TBP5 190 aa9.1□□□□□ -0.95
CD46-218ENST00000496723 TLL2Q9Y6L7 1015 aa9.1□□□□□ -0.95
CD46-218ENST00000496723 CFAP99D6REC4 459 aa9.09□□□□□ -0.95
CD46-218ENST00000496723 F12P00748 615 aaPredicted RBP9.08□□□□□ -0.96
CD46-218ENST00000496723 NNTQ13423 1086 aa9.08□□□□□ -0.96
CD46-218ENST00000496723 LCE2CQ5TA81 110 aa9.08□□□□□ -0.96
CD46-218ENST00000496723 CDK15Q96Q40 435 aa9.08□□□□□ -0.96
CD46-218ENST00000496723 ADH1CP00326 375 aa9.07□□□□□ -0.96
CD46-218ENST00000496723 TUSC1Q2TAM9 212 aa9.07□□□□□ -0.96
CD46-218ENST00000496723 IRF7Q92985 503 aa9.06□□□□□ -0.96
CD46-218ENST00000496723 ZFP42Q96MM3 310 aa9.06□□□□□ -0.96
CD46-218ENST00000496723 SCARF1Q14162 830 aa9.05□□□□□ -0.96
CD46-218ENST00000496723 KLF16Q9BXK1 252 aaPredicted RBP9.05□□□□□ -0.96
CD46-218ENST00000496723 TIMP2P16035 220 aa9.04□□□□□ -0.96
CD46-218ENST00000496723 MRPL14Q6P1L8 145 aaKnown RBP9.04□□□□□ -0.96
CD46-218ENST00000496723 BPHLQ86WA6 291 aaPredicted RBP9.04□□□□□ -0.96
CD46-218ENST00000496723 ARMC2Q8NEN0 867 aa9.04□□□□□ -0.96
CD46-218ENST00000496723 MAP10Q9P2G4 905 aa9.04□□□□□ -0.96
CD46-218ENST00000496723 WDR4P57081 412 aaKnown RBP9.03□□□□□ -0.96
CD46-218ENST00000496723 NR5A1Q13285 461 aa9.03□□□□□ -0.96
CD46-218ENST00000496723 CABLES1Q8TDN4 633 aa9.03□□□□□ -0.96
CD46-218ENST00000496723 FOXJ1Q92949 421 aa9.03□□□□□ -0.96
CD46-218ENST00000496723 NUTM2BA6NNL0 878 aaPredicted RBP9.02□□□□□ -0.97
CD46-218ENST00000496723 NUTM2EB1AL46 878 aaPredicted RBP9.02□□□□□ -0.97
CD46-218ENST00000496723 H3BM21 787 aa9.02□□□□□ -0.97
CD46-218ENST00000496723 PDE4DQ08499 809 aa9.02□□□□□ -0.97
CD46-218ENST00000496723 NUTM2DQ5VT03 806 aaPredicted RBP9.02□□□□□ -0.97
CD46-218ENST00000496723 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
CD46-218ENST00000496723 NUTM2AQ8IVF1 878 aaPredicted RBP9.02□□□□□ -0.97
CD46-218ENST00000496723 FAM181BA6NEQ2 426 aa9.01□□□□□ -0.97
CD46-218ENST00000496723 PER1O15534 1290 aaPredicted RBP9.01□□□□□ -0.97
CD46-218ENST00000496723 ARID5BQ14865 1188 aa9.01□□□□□ -0.97
CD46-218ENST00000496723 AGERQ15109 404 aa9.01□□□□□ -0.97
CD46-218ENST00000496723 CSPP1Q1MSJ5 1256 aa9.01□□□□□ -0.97
CD46-218ENST00000496723 LILRB3O75022 631 aa9□□□□□ -0.97
CD46-218ENST00000496723 LIMD1Q9UGP4 676 aa9□□□□□ -0.97
CD46-218ENST00000496723 GMPRP36959 345 aa8.99□□□□□ -0.97
CD46-218ENST00000496723 HELBQ8NG08 1087 aaPredicted RBP8.99□□□□□ -0.97
CD46-218ENST00000496723 PURBQ96QR8 312 aaKnown RBP8.99□□□□□ -0.97
CD46-218ENST00000496723 RSPH6AQ9H0K4 717 aa8.99□□□□□ -0.97
CD46-218ENST00000496723 ZIC2O95409 532 aaPredicted RBP8.98□□□□□ -0.97
CD46-218ENST00000496723 GRM5P41594 1212 aa8.98□□□□□ -0.97
CD46-218ENST00000496723 QPCTQ16769 361 aa8.98□□□□□ -0.97
CD46-218ENST00000496723 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
CD46-218ENST00000496723 NBPF14Q5TI25 921 aa8.98□□□□□ -0.97
CD46-218ENST00000496723 TSC1Q92574 1164 aa8.98□□□□□ -0.97
CD46-218ENST00000496723 SH3RF1Q7Z6J0 888 aa8.96□□□□□ -0.98
CD46-218ENST00000496723 ITPKCQ96DU7 683 aa8.96□□□□□ -0.98
CD46-218ENST00000496723 C1QTNF2Q9BXJ5 285 aa8.96□□□□□ -0.98
CD46-218ENST00000496723 MAP4K5Q9Y4K4 846 aa8.96□□□□□ -0.98
CD46-218ENST00000496723 UPP2O95045 317 aa8.95□□□□□ -0.98
CD46-218ENST00000496723 NR3C2P08235 984 aa8.95□□□□□ -0.98
CD46-218ENST00000496723 VEGFBP49765 207 aa8.95□□□□□ -0.98
CD46-218ENST00000496723 TRMT44Q8IYL2 757 aaKnown RBP8.95□□□□□ -0.98
CD46-218ENST00000496723 ZSCAN1Q8NBB4 408 aa8.95□□□□□ -0.98
CD46-218ENST00000496723 GPKOWQ92917 476 aaPredicted RBP eCLIP8.95□□□□□ -0.981e-24■□□□□ 10.7
CD46-218ENST00000496723 ZFAND3Q9H8U3 227 aa8.95□□□□□ -0.98
CD46-218ENST00000496723 CLK2P49760 499 aaKnown RBP8.94□□□□□ -0.98
CD46-218ENST00000496723 TPRNQ4KMQ1 711 aa8.94□□□□□ -0.98
CD46-218ENST00000496723 ERBB4Q15303 1308 aa8.94□□□□□ -0.98
CD46-218ENST00000496723 MAN1A2O60476 641 aa8.93□□□□□ -0.98
CD46-218ENST00000496723 VSIG8P0DPA2 414 aa8.93□□□□□ -0.98
CD46-218ENST00000496723 RTL5Q5HYW3 569 aaPredicted RBP8.93□□□□□ -0.98
CD46-218ENST00000496723 SH3BP5LQ7L8J4 393 aa8.93□□□□□ -0.98
CD46-218ENST00000496723 SLC24A3Q9HC58 644 aa8.93□□□□□ -0.98
CD46-218ENST00000496723 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
CD46-218ENST00000496723 VASH1Q7L8A9 365 aaPredicted RBP8.91□□□□□ -0.98
CD46-218ENST00000496723 MEIOBQ8N635 442 aa8.91□□□□□ -0.98
CD46-218ENST00000496723 EMILIN1Q9Y6C2 1016 aa8.91□□□□□ -0.98
CD46-218ENST00000496723 BMP2P12643 396 aa8.9□□□□□ -0.98
CD46-218ENST00000496723 FSHRP23945 695 aa8.9□□□□□ -0.98
CD46-218ENST00000496723 C6orf118Q5T5N4 469 aa8.9□□□□□ -0.98
CD46-218ENST00000496723 LINC00528Q8N1L1 170 aa8.9□□□□□ -0.98
CD46-218ENST00000496723 MAGEB6P1A0A0J9YX57 407 aa8.89□□□□□ -0.99
CD46-218ENST00000496723 SOBPA7XYQ1 873 aa8.89□□□□□ -0.99
CD46-218ENST00000496723 TSEN34Q9BSV6 310 aaKnown RBP8.89□□□□□ -0.99
CD46-218ENST00000496723 POLR3EQ9NVU0 708 aa8.89□□□□□ -0.99
CD46-218ENST00000496723 CCDC116Q8IYX3 515 aa8.88□□□□□ -0.99
CD46-218ENST00000496723 PDXDC2PQ6P474 469 aa8.87□□□□□ -0.99
CD46-218ENST00000496723 SOS2Q07890 1332 aaPredicted RBP8.86□□□□□ -0.99
CD46-218ENST00000496723 CTDSPL2Q05D32 466 aa8.86□□□□□ -0.99
CD46-218ENST00000496723 ERFEQ4G0M1 354 aa8.86□□□□□ -0.99
CD46-218ENST00000496723 CDV3Q9UKY7 258 aaKnown RBP8.86□□□□□ -0.99
CD46-218ENST00000496723 PRKCSHP14314 528 aaPredicted RBP8.85□□□□□ -0.99
CD46-218ENST00000496723 SKIV2LQ15477 1246 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms