RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 RBM6P78332 1123 aaKnown RBP29.37■■■□□ 2.29
COL9A2-211ENST00000496215 CABP2Q9NPB3 220 aa29.37■■■□□ 2.29
COL9A2-211ENST00000496215 CCDC61Q9Y6R9 512 aa29.37■■■□□ 2.29
COL9A2-211ENST00000496215 CLSPNQ9HAW4 1339 aa29.37■■■□□ 2.29
COL9A2-211ENST00000496215 ACEP12821 1306 aa29.35■■■□□ 2.29
COL9A2-211ENST00000496215 EVC2Q86UK5 1308 aa29.35■■■□□ 2.29
COL9A2-211ENST00000496215 PLEKHG3A1L390 1219 aa29.34■■■□□ 2.29
COL9A2-211ENST00000496215 HAP1P54257 671 aaPredicted RBP29.34■■■□□ 2.29
COL9A2-211ENST00000496215 TRPC5Q9UL62 973 aaPredicted RBP29.33■■■□□ 2.29
COL9A2-211ENST00000496215 SBNO2Q9Y2G9 1366 aa29.33■■■□□ 2.29
COL9A2-211ENST00000496215 NWD2Q9ULI1 1742 aa29.31■■■□□ 2.28
COL9A2-211ENST00000496215 PHRF1Q9P1Y6 1649 aaKnown RBP29.31■■■□□ 2.28
COL9A2-211ENST00000496215 PAK3O75914 559 aaPredicted RBP29.3■■■□□ 2.28
COL9A2-211ENST00000496215 GLI3P10071 1580 aa29.3■■■□□ 2.28
COL9A2-211ENST00000496215 NRAPQ86VF7 1730 aa29.28■■■□□ 2.28
COL9A2-211ENST00000496215 FAM83GA6ND36 823 aa29.26■■■□□ 2.27
COL9A2-211ENST00000496215 UNC5CLQ8IV45 518 aa29.26■■■□□ 2.27
COL9A2-211ENST00000496215 COL14A1Q05707 1796 aaKnown RBP29.24■■■□□ 2.27
COL9A2-211ENST00000496215 AKAP12Q02952 1782 aa29.24■■■□□ 2.27
COL9A2-211ENST00000496215 CABP1Q9NZU7 370 aa29.23■■■□□ 2.27
COL9A2-211ENST00000496215 ATAD2Q6PL18 1390 aa29.23■■■□□ 2.27
COL9A2-211ENST00000496215 NUTM2GQ5VZR2 741 aa29.22■■■□□ 2.27
COL9A2-211ENST00000496215 GJD4Q96KN9 370 aaPredicted RBP29.22■■■□□ 2.27
COL9A2-211ENST00000496215 NRKQ7Z2Y5 1582 aa29.22■■■□□ 2.27
COL9A2-211ENST00000496215 UPF1Q92900 1129 aaKnown RBP eCLIP29.21■■■□□ 2.27
COL9A2-211ENST00000496215 TIMELESSQ9UNS1 1208 aa29.21■■■□□ 2.27
COL9A2-211ENST00000496215 USP6P35125 1406 aa29.2■■■□□ 2.27
COL9A2-211ENST00000496215 CCER1Q8TC90 406 aaPredicted RBP29.2■■■□□ 2.26
COL9A2-211ENST00000496215 BRD4O60885 1362 aaPredicted RBP29.2■■■□□ 2.26
COL9A2-211ENST00000496215 EP400Q96L91 3159 aa29.19■■■□□ 2.26
COL9A2-211ENST00000496215 SSH2Q76I76 1423 aa29.18■■■□□ 2.26
COL9A2-211ENST00000496215 PIK3C2AO00443 1686 aa29.16■■■□□ 2.26
COL9A2-211ENST00000496215 MON2Q7Z3U7 1717 aa29.16■■■□□ 2.26
COL9A2-211ENST00000496215 VPS72Q15906 364 aa29.15■■■□□ 2.26
COL9A2-211ENST00000496215 USP19O94966 1318 aa29.15■■■□□ 2.26
COL9A2-211ENST00000496215 KIAA0232Q92628 1395 aa29.14■■■□□ 2.26
COL9A2-211ENST00000496215 BRWD3Q6RI45 1802 aa29.14■■■□□ 2.26
COL9A2-211ENST00000496215 USP47Q96K76 1375 aa29.13■■■□□ 2.25
COL9A2-211ENST00000496215 ABTB2Q8N961 1025 aa29.13■■■□□ 2.25
COL9A2-211ENST00000496215 BTG4Q9NY30 223 aa29.13■■■□□ 2.25
COL9A2-211ENST00000496215 CPSF1Q10570 1443 aaKnown RBP29.11■■■□□ 2.25
COL9A2-211ENST00000496215 LMO7Q8WWI1 1683 aa29.09■■■□□ 2.25
COL9A2-211ENST00000496215 ST20-MTHFSA0A0A6YYL1 179 aa29.09■■■□□ 2.25
COL9A2-211ENST00000496215 CHRNA2Q15822 529 aa29.09■■■□□ 2.25
COL9A2-211ENST00000496215 PRDM11Q9NQV5 511 aa29.09■■■□□ 2.25
COL9A2-211ENST00000496215 CD163L1Q9NR16 1453 aa29.09■■■□□ 2.25
COL9A2-211ENST00000496215 ZC3H6P61129 1189 aaKnown RBP29.08■■■□□ 2.25
COL9A2-211ENST00000496215 SLIT3O75094 1523 aa29.08■■■□□ 2.25
COL9A2-211ENST00000496215 TESK2Q96S53 571 aa29.07■■■□□ 2.24
COL9A2-211ENST00000496215 KTN1Q86UP2 1357 aaKnown RBP29.06■■■□□ 2.24
COL9A2-211ENST00000496215 NLRP13Q86W25 1043 aa29.05■■■□□ 2.24
COL9A2-211ENST00000496215 ZNF692Q9BU19 519 aaPredicted RBP29.05■■■□□ 2.24
COL9A2-211ENST00000496215 SLC24A1O60721 1099 aa29.04■■■□□ 2.24
COL9A2-211ENST00000496215 CCDC9Q9Y3X0 531 aaKnown RBP29.04■■■□□ 2.24
COL9A2-211ENST00000496215 CAMTA1Q9Y6Y1 1673 aa29.04■■■□□ 2.24
COL9A2-211ENST00000496215 CPDO75976 1380 aa29.03■■■□□ 2.24
COL9A2-211ENST00000496215 TTC21BQ7Z4L5 1316 aa29.02■■■□□ 2.24
COL9A2-211ENST00000496215 ONECUT3O60422 494 aaPredicted RBP29.02■■■□□ 2.24
COL9A2-211ENST00000496215 PUS7Q96PZ0 661 aaKnown RBP29.02■■■□□ 2.24
COL9A2-211ENST00000496215 GCP02774 474 aa29.01■■■□□ 2.23
COL9A2-211ENST00000496215 SEPT12Q8IYM1 358 aa29.01■■■□□ 2.23
COL9A2-211ENST00000496215 TMC1Q8TDI8 760 aa29.01■■■□□ 2.23
COL9A2-211ENST00000496215 NINLQ9Y2I6 1382 aa29.01■■■□□ 2.23
COL9A2-211ENST00000496215 SPATA31A5Q5VU36 1347 aa29■■■□□ 2.23
COL9A2-211ENST00000496215 SPATA31A7Q8IWB4 1347 aa29■■■□□ 2.23
COL9A2-211ENST00000496215 TTC21AQ8NDW8 1320 aa29■■■□□ 2.23
COL9A2-211ENST00000496215 USP54Q70EL1 1684 aa29■■■□□ 2.23
COL9A2-211ENST00000496215 THSD7AQ9UPZ6 1657 aa29■■■□□ 2.23
COL9A2-211ENST00000496215 NLRP6P59044 892 aa28.99■■■□□ 2.23
COL9A2-211ENST00000496215 HDGFL2Q7Z4V5 671 aaPredicted RBP28.97■■■□□ 2.23
COL9A2-211ENST00000496215 SLC12A5Q9H2X9 1139 aa28.97■■■□□ 2.23
COL9A2-211ENST00000496215 COL18A1P39060 1754 aa28.97■■■□□ 2.23
COL9A2-211ENST00000496215 FAM98CQ17RN3 349 aaKnown RBP28.96■■■□□ 2.23
COL9A2-211ENST00000496215 A0A1W2PP64 1363 aa28.96■■■□□ 2.23
COL9A2-211ENST00000496215 EDC4Q6P2E9 1401 aaKnown RBP28.95■■■□□ 2.23
COL9A2-211ENST00000496215 TMF1P82094 1093 aa28.95■■■□□ 2.22
COL9A2-211ENST00000496215 STRN4Q9NRL3 753 aa28.94■■■□□ 2.22
COL9A2-211ENST00000496215 TERF2IPQ9NYB0 399 aa28.94■■■□□ 2.22
COL9A2-211ENST00000496215 NFAT5O94916 1531 aa28.94■■■□□ 2.22
COL9A2-211ENST00000496215 SPATA31A1Q5TZJ5 1347 aa28.94■■■□□ 2.22
COL9A2-211ENST00000496215 COL5A2P05997 1499 aaPredicted RBP28.92■■■□□ 2.22
COL9A2-211ENST00000496215 ZRANB1Q9UGI0 708 aa28.92■■■□□ 2.22
COL9A2-211ENST00000496215 MYOM1P52179 1685 aa28.91■■■□□ 2.22
COL9A2-211ENST00000496215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.89■■■□□ 2.22
COL9A2-211ENST00000496215 LARP1Q6PKG0 1096 aaKnown RBP28.88■■■□□ 2.21
COL9A2-211ENST00000496215 RGPD5Q99666 1765 aa28.88■■■□□ 2.21
COL9A2-211ENST00000496215 AATKQ6ZMQ8 1374 aa28.88■■■□□ 2.21
COL9A2-211ENST00000496215 NME9Q86XW9 330 aa28.87■■■□□ 2.21
COL9A2-211ENST00000496215 USP31Q70CQ4 1352 aa28.87■■■□□ 2.21
COL9A2-211ENST00000496215 ZBTB7CA1YPR0 619 aa28.86■■■□□ 2.21
COL9A2-211ENST00000496215 CDCA8Q53HL2 280 aa28.86■■■□□ 2.21
COL9A2-211ENST00000496215 KRT27Q7Z3Y8 459 aa28.86■■■□□ 2.21
COL9A2-211ENST00000496215 KCNH5Q8NCM2 988 aa28.86■■■□□ 2.21
COL9A2-211ENST00000496215 ANKRD36BQ8N2N9 1353 aa28.86■■■□□ 2.21
COL9A2-211ENST00000496215 A0A0G2JS52 829 aa28.85■■■□□ 2.21
COL9A2-211ENST00000496215 MYT1Q01538 1121 aa28.85■■■□□ 2.21
COL9A2-211ENST00000496215 ABCC6O95255 1503 aa28.84■■■□□ 2.21
COL9A2-211ENST00000496215 SOX12O15370 315 aa28.84■■■□□ 2.21
COL9A2-211ENST00000496215 ARHGEF25Q86VW2 580 aa28.84■■■□□ 2.21
COL9A2-211ENST00000496215 AXIN2Q9Y2T1 843 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms