RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 XPCQ01831 940 aaPredicted RBP21.31■■□□□ 1
PHF1-211ENST00000495509 PSME1Q06323 249 aa21.31■■□□□ 1
PHF1-211ENST00000495509 MORC1Q86VD1 984 aa21.31■■□□□ 1
PHF1-211ENST00000495509 DDX17Q92841 729 aaKnown RBP21.31■■□□□ 1
PHF1-211ENST00000495509 TNNT2P45379 298 aaPredicted RBP21.31■■□□□ 1
PHF1-211ENST00000495509 NRKQ7Z2Y5 1582 aa21.3■■□□□ 1
PHF1-211ENST00000495509 KIF20BQ96Q89 1820 aa21.29■■□□□ 1
PHF1-211ENST00000495509 CCER2I3L3R5 266 aa21.29■■□□□ 1
PHF1-211ENST00000495509 BRINP3Q76B58 766 aa21.29■■□□□ 1
PHF1-211ENST00000495509 MYBBP1AQ9BQG0 1328 aaKnown RBP21.29■■□□□ 1
PHF1-211ENST00000495509 NSD2O96028 1365 aa21.27■■□□□ 1
PHF1-211ENST00000495509 PAK3O75914 559 aaPredicted RBP21.27■■□□□ 1
PHF1-211ENST00000495509 PPP2R1AP30153 589 aa21.27■■□□□ 1
PHF1-211ENST00000495509 KRT28Q7Z3Y7 464 aa21.26■□□□□ 0.99
PHF1-211ENST00000495509 KIF1AQ12756 1690 aa21.26■□□□□ 0.99
PHF1-211ENST00000495509 FBLN1P23142 703 aa21.25■□□□□ 0.99
PHF1-211ENST00000495509 TTC21AQ8NDW8 1320 aa21.24■□□□□ 0.99
PHF1-211ENST00000495509 NUTM2GQ5VZR2 741 aa21.24■□□□□ 0.99
PHF1-211ENST00000495509 ANKRD26Q9UPS8 1709 aa21.24■□□□□ 0.99
PHF1-211ENST00000495509 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
PHF1-211ENST00000495509 NLRP13Q86W25 1043 aa21.22■□□□□ 0.99
PHF1-211ENST00000495509 ABTB2Q8N961 1025 aa21.22■□□□□ 0.99
PHF1-211ENST00000495509 COG3Q96JB2 828 aa21.22■□□□□ 0.99
PHF1-211ENST00000495509 PIK3C2AO00443 1686 aa21.2■□□□□ 0.98
PHF1-211ENST00000495509 NPHP3Q7Z494 1330 aa21.2■□□□□ 0.98
PHF1-211ENST00000495509 NLRP6P59044 892 aa21.2■□□□□ 0.98
PHF1-211ENST00000495509 BRD4O60885 1362 aaPredicted RBP21.19■□□□□ 0.98
PHF1-211ENST00000495509 TRPM3Q9HCF6 1732 aaPredicted RBP21.18■□□□□ 0.98
PHF1-211ENST00000495509 OVOS2A0A0J9YW53 1432 aa21.18■□□□□ 0.98
PHF1-211ENST00000495509 OVOS2Q6IE36 1432 aa21.18■□□□□ 0.98
PHF1-211ENST00000495509 LMOD2Q6P5Q4 547 aa21.18■□□□□ 0.98
PHF1-211ENST00000495509 USP31Q70CQ4 1352 aa21.17■□□□□ 0.98
PHF1-211ENST00000495509 MTHFSP49914 203 aa21.16■□□□□ 0.98
PHF1-211ENST00000495509 CERKQ8TCT0 537 aa21.16■□□□□ 0.98
PHF1-211ENST00000495509 PXDNQ92626 1479 aa21.16■□□□□ 0.98
PHF1-211ENST00000495509 SOX12O15370 315 aa21.15■□□□□ 0.98
PHF1-211ENST00000495509 MAP2P11137 1827 aaKnown RBP21.15■□□□□ 0.98
PHF1-211ENST00000495509 PLEKHG5O94827 1062 aa21.15■□□□□ 0.98
PHF1-211ENST00000495509 MARF1Q9Y4F3 1742 aaKnown RBP21.15■□□□□ 0.98
PHF1-211ENST00000495509 TOM1O60784 492 aa21.14■□□□□ 0.97
PHF1-211ENST00000495509 ROBO1Q9Y6N7 1651 aa21.14■□□□□ 0.97
PHF1-211ENST00000495509 SCAF1Q9H7N4 1312 aaKnown RBP21.14■□□□□ 0.97
PHF1-211ENST00000495509 PIP4K2BP78356 416 aa21.13■□□□□ 0.97
PHF1-211ENST00000495509 POLKQ9UBT6 870 aa21.13■□□□□ 0.97
PHF1-211ENST00000495509 UBAP1LF5GYI3 381 aa21.13■□□□□ 0.97
PHF1-211ENST00000495509 RRS1Q15050 365 aaKnown RBP21.13■□□□□ 0.97
PHF1-211ENST00000495509 SOS2Q07890 1332 aaPredicted RBP21.12■□□□□ 0.97
PHF1-211ENST00000495509 SBNO1A3KN83 1393 aa21.12■□□□□ 0.97
PHF1-211ENST00000495509 FAM9BQ8IZU0 186 aa21.12■□□□□ 0.97
PHF1-211ENST00000495509 PNISRQ8TF01 805 aaKnown RBP21.12■□□□□ 0.97
PHF1-211ENST00000495509 EMILIN1Q9Y6C2 1016 aa21.11■□□□□ 0.97
PHF1-211ENST00000495509 ALS2Q96Q42 1657 aa21.11■□□□□ 0.97
PHF1-211ENST00000495509 SPATA31A3Q5VYP0 1347 aa21.11■□□□□ 0.97
PHF1-211ENST00000495509 PPM1GO15355 546 aaPredicted RBP21.1■□□□□ 0.97
PHF1-211ENST00000495509 NHSL1Q5SYE7 1610 aa21.1■□□□□ 0.97
PHF1-211ENST00000495509 AATKQ6ZMQ8 1374 aa21.09■□□□□ 0.97
PHF1-211ENST00000495509 USP54Q70EL1 1684 aa21.08■□□□□ 0.97
PHF1-211ENST00000495509 TNS3Q68CZ2 1445 aa21.08■□□□□ 0.97
PHF1-211ENST00000495509 YTHDC1Q96MU7 727 aaKnown RBP21.08■□□□□ 0.96
PHF1-211ENST00000495509 IQSEC2Q5JU85 1478 aa21.07■□□□□ 0.96
PHF1-211ENST00000495509 CABLES1Q8TDN4 633 aa21.06■□□□□ 0.96
PHF1-211ENST00000495509 GCP02774 474 aa21.05■□□□□ 0.96
PHF1-211ENST00000495509 USP19O94966 1318 aa21.05■□□□□ 0.96
PHF1-211ENST00000495509 MAP3K19Q56UN5 1328 aa21.05■□□□□ 0.96
PHF1-211ENST00000495509 MED1Q15648 1581 aaPredicted RBP21.03■□□□□ 0.96
PHF1-211ENST00000495509 CFAP53Q96M91 514 aa21.03■□□□□ 0.96
PHF1-211ENST00000495509 AHDC1Q5TGY3 1603 aaPredicted RBP21.02■□□□□ 0.96
PHF1-211ENST00000495509 ARHGEF10O15013 1369 aa21.02■□□□□ 0.96
PHF1-211ENST00000495509 PNPLA6Q8IY17 1366 aa21.02■□□□□ 0.96
PHF1-211ENST00000495509 KCNH5Q8NCM2 988 aa21.02■□□□□ 0.96
PHF1-211ENST00000495509 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
PHF1-211ENST00000495509 SMG6Q86US8 1419 aaKnown RBP21.01■□□□□ 0.95
PHF1-211ENST00000495509 PEAK1Q9H792 1746 aa21.01■□□□□ 0.95
PHF1-211ENST00000495509 SLIT3O75094 1523 aa21.01■□□□□ 0.95
PHF1-211ENST00000495509 NFAT5O94916 1531 aa21.01■□□□□ 0.95
PHF1-211ENST00000495509 COL3A1P02461 1466 aaPredicted RBP21■□□□□ 0.95
PHF1-211ENST00000495509 HSP90AB2PQ58FF8 381 aa21■□□□□ 0.95
PHF1-211ENST00000495509 LRRC59Q96AG4 307 aaKnown RBP21■□□□□ 0.95
PHF1-211ENST00000495509 INSRP06213 1382 aa20.99■□□□□ 0.95
PHF1-211ENST00000495509 ZBTB7CA1YPR0 619 aa20.99■□□□□ 0.95
PHF1-211ENST00000495509 AMPHP49418 695 aa20.99■□□□□ 0.95
PHF1-211ENST00000495509 PHLPP1O60346 1717 aa20.98■□□□□ 0.95
PHF1-211ENST00000495509 ZC3H6P61129 1189 aaKnown RBP20.98■□□□□ 0.95
PHF1-211ENST00000495509 WDR43Q15061 677 aaKnown RBP eCLIP20.98■□□□□ 0.95
PHF1-211ENST00000495509 SHPRHQ149N8 1683 aa20.98■□□□□ 0.95
PHF1-211ENST00000495509 CDK12Q9NYV4 1490 aaPredicted RBP20.97■□□□□ 0.95
PHF1-211ENST00000495509 LTN1O94822 1766 aa20.97■□□□□ 0.95
PHF1-211ENST00000495509 SENP3-EIF4A1A0A087X0R7 540 aa20.97■□□□□ 0.95
PHF1-211ENST00000495509 DIAPH1O60610 1272 aaKnown RBP20.97■□□□□ 0.95
PHF1-211ENST00000495509 ARHGEF25Q86VW2 580 aa20.97■□□□□ 0.95
PHF1-211ENST00000495509 CRYBG1Q9Y4K1 1723 aa20.96■□□□□ 0.95
PHF1-211ENST00000495509 PHRF1Q9P1Y6 1649 aaKnown RBP20.95■□□□□ 0.95
PHF1-211ENST00000495509 HOXC9P31274 260 aa20.95■□□□□ 0.94
PHF1-211ENST00000495509 IL13P35225 146 aa20.95■□□□□ 0.94
PHF1-211ENST00000495509 COL16A1Q07092 1604 aaPredicted RBP20.94■□□□□ 0.94
PHF1-211ENST00000495509 U2SURPO15042 1029 aaKnown RBP20.94■□□□□ 0.94
PHF1-211ENST00000495509 EIF4A2Q14240 407 aaKnown RBP20.94■□□□□ 0.94
PHF1-211ENST00000495509 FLT4P35916 1363 aa20.93■□□□□ 0.94
PHF1-211ENST00000495509 IP6K1Q92551 441 aa20.93■□□□□ 0.94
PHF1-211ENST00000495509 U2AF1L5P0DN76 240 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms