RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 BRD4O60885 1362 aaPredicted RBP15.39■□□□□ 0.05
KDM1A-205ENST00000494920 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
KDM1A-205ENST00000494920 KRT28Q7Z3Y7 464 aa15.39■□□□□ 0.05
KDM1A-205ENST00000494920 NGDNQ8NEJ9 315 aaKnown RBP15.39■□□□□ 0.05
KDM1A-205ENST00000494920 SPATA31A3Q5VYP0 1347 aa15.39■□□□□ 0.05
KDM1A-205ENST00000494920 PNPLA6Q8IY17 1366 aa15.38■□□□□ 0.05
KDM1A-205ENST00000494920 JCADQ9P266 1359 aa15.36■□□□□ 0.05
KDM1A-205ENST00000494920 EDC4Q6P2E9 1401 aaKnown RBP15.36■□□□□ 0.05
KDM1A-205ENST00000494920 PSME1Q06323 249 aa15.35■□□□□ 0.05
KDM1A-205ENST00000494920 TMC1Q8TDI8 760 aa15.35■□□□□ 0.05
KDM1A-205ENST00000494920 LRRC59Q96AG4 307 aaKnown RBP15.35■□□□□ 0.05
KDM1A-205ENST00000494920 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
KDM1A-205ENST00000494920 KTN1Q86UP2 1357 aaKnown RBP15.35■□□□□ 0.05
KDM1A-205ENST00000494920 PHRF1Q9P1Y6 1649 aaKnown RBP15.34■□□□□ 0.05
KDM1A-205ENST00000494920 TTC21BQ7Z4L5 1316 aa15.34■□□□□ 0.05
KDM1A-205ENST00000494920 TERF2IPQ9NYB0 399 aa15.33■□□□□ 0.04
KDM1A-205ENST00000494920 ARHGEF10O15013 1369 aa15.33■□□□□ 0.04
KDM1A-205ENST00000494920 LRP6O75581 1613 aa15.32■□□□□ 0.04
KDM1A-205ENST00000494920 KIF20BQ96Q89 1820 aa15.32■□□□□ 0.04
KDM1A-205ENST00000494920 CARD14Q9BXL6 1004 aa15.32■□□□□ 0.04
KDM1A-205ENST00000494920 SLIT3O75094 1523 aa15.32■□□□□ 0.04
KDM1A-205ENST00000494920 HDGFL2Q7Z4V5 671 aaPredicted RBP15.31■□□□□ 0.04
KDM1A-205ENST00000494920 USP19O94966 1318 aa15.31■□□□□ 0.04
KDM1A-205ENST00000494920 TTC21AQ8NDW8 1320 aa15.31■□□□□ 0.04
KDM1A-205ENST00000494920 USP31Q70CQ4 1352 aa15.31■□□□□ 0.04
KDM1A-205ENST00000494920 OVOS2A0A0J9YW53 1432 aa15.31■□□□□ 0.04
KDM1A-205ENST00000494920 OVOS2Q6IE36 1432 aa15.31■□□□□ 0.04
KDM1A-205ENST00000494920 NSD3Q9BZ95 1437 aa15.3■□□□□ 0.04
KDM1A-205ENST00000494920 ANKRD26Q9UPS8 1709 aa15.29■□□□□ 0.04
KDM1A-205ENST00000494920 SPATA31A6Q5VVP1 1343 aa15.28■□□□□ 0.04
KDM1A-205ENST00000494920 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
KDM1A-205ENST00000494920 PANK3Q9H999 370 aa15.28■□□□□ 0.04
KDM1A-205ENST00000494920 NFAT5O94916 1531 aa15.27■□□□□ 0.04
KDM1A-205ENST00000494920 PER1O15534 1290 aaPredicted RBP15.26■□□□□ 0.03
KDM1A-205ENST00000494920 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
KDM1A-205ENST00000494920 NME9Q86XW9 330 aa15.25■□□□□ 0.03
KDM1A-205ENST00000494920 ABTB2Q8N961 1025 aa15.25■□□□□ 0.03
KDM1A-205ENST00000494920 FYB1O15117 783 aa15.24■□□□□ 0.03
KDM1A-205ENST00000494920 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.036e-6■□□□□ 8.8
KDM1A-205ENST00000494920 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
KDM1A-205ENST00000494920 CABLES1Q8TDN4 633 aa15.23■□□□□ 0.03
KDM1A-205ENST00000494920 COL18A1P39060 1754 aa15.23■□□□□ 0.03
KDM1A-205ENST00000494920 LMO7Q8WWI1 1683 aa15.22■□□□□ 0.03
KDM1A-205ENST00000494920 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
KDM1A-205ENST00000494920 NUTM2GQ5VZR2 741 aa15.22■□□□□ 0.03
KDM1A-205ENST00000494920 NPC1L1Q9UHC9 1359 aa15.22■□□□□ 0.03
KDM1A-205ENST00000494920 NLRP6P59044 892 aa15.21■□□□□ 0.03
KDM1A-205ENST00000494920 LMOD2Q6P5Q4 547 aa15.21■□□□□ 0.03
KDM1A-205ENST00000494920 NLRP13Q86W25 1043 aa15.21■□□□□ 0.03
KDM1A-205ENST00000494920 CPDO75976 1380 aa15.21■□□□□ 0.02
KDM1A-205ENST00000494920 NSD2O96028 1365 aa15.21■□□□□ 0.02
KDM1A-205ENST00000494920 CGNL1Q0VF96 1302 aa15.2■□□□□ 0.02
KDM1A-205ENST00000494920 PLCH1Q4KWH8 1693 aa15.2■□□□□ 0.02
KDM1A-205ENST00000494920 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
KDM1A-205ENST00000494920 LTN1O94822 1766 aa15.2■□□□□ 0.02
KDM1A-205ENST00000494920 COL14A1Q05707 1796 aaKnown RBP15.2■□□□□ 0.02
KDM1A-205ENST00000494920 NRAPQ86VF7 1730 aa15.2■□□□□ 0.02
KDM1A-205ENST00000494920 NWD2Q9ULI1 1742 aa15.2■□□□□ 0.02
KDM1A-205ENST00000494920 SLIT2O94813 1529 aa15.19■□□□□ 0.02
KDM1A-205ENST00000494920 ABCC6O95255 1503 aa15.19■□□□□ 0.02
KDM1A-205ENST00000494920 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.18■□□□□ 0.02
KDM1A-205ENST00000494920 GCP02774 474 aa15.18■□□□□ 0.02
KDM1A-205ENST00000494920 GGNBP2Q9H3C7 697 aa15.18■□□□□ 0.02
KDM1A-205ENST00000494920 KIAA0232Q92628 1395 aa15.17■□□□□ 0.02
KDM1A-205ENST00000494920 NUTM2BA6NNL0 878 aaPredicted RBP15.16■□□□□ 0.02
KDM1A-205ENST00000494920 NUTM2EB1AL46 878 aaPredicted RBP15.16■□□□□ 0.02
KDM1A-205ENST00000494920 NUTM2AQ8IVF1 878 aaPredicted RBP15.16■□□□□ 0.02
KDM1A-205ENST00000494920 PEAK1Q9H792 1746 aa15.16■□□□□ 0.02
KDM1A-205ENST00000494920 MAP2P11137 1827 aaKnown RBP15.15■□□□□ 0.02
KDM1A-205ENST00000494920 ARHGEF25Q86VW2 580 aa15.15■□□□□ 0.02
KDM1A-205ENST00000494920 COG3Q96JB2 828 aa15.15■□□□□ 0.02
KDM1A-205ENST00000494920 KNSTRNQ9Y448 316 aa15.15■□□□□ 0.02
KDM1A-205ENST00000494920 RGPD5Q99666 1765 aa15.15■□□□□ 0.02
KDM1A-205ENST00000494920 BCL9LQ86UU0 1499 aa15.14■□□□□ 0.01
KDM1A-205ENST00000494920 AATKQ6ZMQ8 1374 aa15.14■□□□□ 0.01
KDM1A-205ENST00000494920 CAMTA1Q9Y6Y1 1673 aa15.14■□□□□ 0.01
KDM1A-205ENST00000494920 ADAMTS2O95450 1211 aa15.14■□□□□ 0.01
KDM1A-205ENST00000494920 FNBP4Q8N3X1 1017 aaPredicted RBP15.14■□□□□ 0.01
KDM1A-205ENST00000494920 KCNH5Q8NCM2 988 aa15.14■□□□□ 0.01
KDM1A-205ENST00000494920 SMG6Q86US8 1419 aaKnown RBP15.14■□□□□ 0.01
KDM1A-205ENST00000494920 FAM83GA6ND36 823 aa15.13■□□□□ 0.01
KDM1A-205ENST00000494920 DDX10Q13206 875 aaKnown RBP15.13■□□□□ 0.01
KDM1A-205ENST00000494920 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
KDM1A-205ENST00000494920 ZC3H6P61129 1189 aaKnown RBP15.12■□□□□ 0.01
KDM1A-205ENST00000494920 RGS17Q9UGC6 210 aaPredicted RBP15.12■□□□□ 0.01
KDM1A-205ENST00000494920 FBLN1P23142 703 aa15.11■□□□□ 0.01
KDM1A-205ENST00000494920 COL5A2P05997 1499 aaPredicted RBP15.1■□□□□ 0.01
KDM1A-205ENST00000494920 C8orf37Q96NL8 207 aa15.1■□□□□ 0.01
KDM1A-205ENST00000494920 PRDM11Q9NQV5 511 aa15.1■□□□□ 0.01
KDM1A-205ENST00000494920 AFF2P51816 1311 aa15.1■□□□□ 0.01
KDM1A-205ENST00000494920 MAP3K19Q56UN5 1328 aa15.1■□□□□ 0.01
KDM1A-205ENST00000494920 RTL1A6NKG5 1358 aa15.1■□□□□ 0.01
KDM1A-205ENST00000494920 KIF24Q5T7B8 1368 aa15.1■□□□□ 0.01
KDM1A-205ENST00000494920 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
KDM1A-205ENST00000494920 CHRNA2Q15822 529 aa15.09■□□□□ 0.01
KDM1A-205ENST00000494920 PARD3Q8TEW0 1356 aa15.09■□□□□ 0.01
KDM1A-205ENST00000494920 ATRNO75882 1429 aa15.09■□□□□ 0.01
KDM1A-205ENST00000494920 SOX12O15370 315 aa15.08■□□□□ 0
KDM1A-205ENST00000494920 AXIN2Q9Y2T1 843 aa15.08■□□□□ 0
KDM1A-205ENST00000494920 RRS1Q15050 365 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms