RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 ANKRD26Q9UPS8 1709 aa15.3■□□□□ 0.04
HDLBP-245ENST00000494862 TOPAZ1Q8N9V7 1692 aa15.29■□□□□ 0.04
HDLBP-245ENST00000494862 SMG6Q86US8 1419 aaKnown RBP15.29■□□□□ 0.04
HDLBP-245ENST00000494862 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
HDLBP-245ENST00000494862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.29■□□□□ 0.04
HDLBP-245ENST00000494862 ACEP12821 1306 aa15.28■□□□□ 0.04
HDLBP-245ENST00000494862 PDE3BQ13370 1112 aa15.28■□□□□ 0.04
HDLBP-245ENST00000494862 KIF20BQ96Q89 1820 aa15.28■□□□□ 0.04
HDLBP-245ENST00000494862 MON2Q7Z3U7 1717 aa15.28■□□□□ 0.04
HDLBP-245ENST00000494862 AKAP12Q02952 1782 aa15.27■□□□□ 0.04
HDLBP-245ENST00000494862 NUTM2FA1L443 756 aa15.27■□□□□ 0.04
HDLBP-245ENST00000494862 NUDCQ9Y266 331 aa15.27■□□□□ 0.04
HDLBP-245ENST00000494862 NWD1Q149M9 1564 aa15.26■□□□□ 0.03
HDLBP-245ENST00000494862 ITSN1Q15811 1721 aa15.26■□□□□ 0.03
HDLBP-245ENST00000494862 TTC21BQ7Z4L5 1316 aa15.25■□□□□ 0.03
HDLBP-245ENST00000494862 NME9Q86XW9 330 aa15.25■□□□□ 0.03
HDLBP-245ENST00000494862 NKTRP30414 1462 aaKnown RBP15.25■□□□□ 0.03
HDLBP-245ENST00000494862 USP6P35125 1406 aa15.25■□□□□ 0.03
HDLBP-245ENST00000494862 ADGRL3Q9HAR2 1447 aa15.25■□□□□ 0.03
HDLBP-245ENST00000494862 SENP3-EIF4A1A0A087X0R7 540 aa15.24■□□□□ 0.03
HDLBP-245ENST00000494862 NEFLP07196 543 aa15.24■□□□□ 0.03
HDLBP-245ENST00000494862 NGEFQ8N5V2 710 aa15.24■□□□□ 0.03
HDLBP-245ENST00000494862 COG3Q96JB2 828 aa15.24■□□□□ 0.03
HDLBP-245ENST00000494862 LMTK3Q96Q04 1460 aa15.24■□□□□ 0.03
HDLBP-245ENST00000494862 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
HDLBP-245ENST00000494862 FMN2Q9NZ56 1722 aa15.23■□□□□ 0.03
HDLBP-245ENST00000494862 SSH2Q76I76 1423 aa15.23■□□□□ 0.03
HDLBP-245ENST00000494862 PNPLA6Q8IY17 1366 aa15.23■□□□□ 0.03
HDLBP-245ENST00000494862 SHPRHQ149N8 1683 aa15.22■□□□□ 0.03
HDLBP-245ENST00000494862 TTC21AQ8NDW8 1320 aa15.22■□□□□ 0.03
HDLBP-245ENST00000494862 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
HDLBP-245ENST00000494862 NGDNQ8NEJ9 315 aaKnown RBP15.22■□□□□ 0.03
HDLBP-245ENST00000494862 SALL2Q9Y467 1007 aaPredicted RBP15.22■□□□□ 0.03
HDLBP-245ENST00000494862 SUPT16HQ9Y5B9 1047 aaKnown RBP15.22■□□□□ 0.03
HDLBP-245ENST00000494862 COL3A1P02461 1466 aaPredicted RBP15.21■□□□□ 0.03
HDLBP-245ENST00000494862 NRKQ7Z2Y5 1582 aa15.21■□□□□ 0.03
HDLBP-245ENST00000494862 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
HDLBP-245ENST00000494862 PMFBP1Q8TBY8 1022 aa15.21■□□□□ 0.03
HDLBP-245ENST00000494862 POLKQ9UBT6 870 aa15.21■□□□□ 0.03
HDLBP-245ENST00000494862 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
HDLBP-245ENST00000494862 PROSER2Q86WR7 435 aaPredicted RBP15.2■□□□□ 0.02
HDLBP-245ENST00000494862 RUNDC1Q96C34 613 aa15.2■□□□□ 0.02
HDLBP-245ENST00000494862 NALCNQ8IZF0 1738 aa15.2■□□□□ 0.02
HDLBP-245ENST00000494862 APAF1O14727 1248 aa15.19■□□□□ 0.02
HDLBP-245ENST00000494862 ZNF521Q96K83 1311 aa15.18■□□□□ 0.02
HDLBP-245ENST00000494862 OVOS2A0A0J9YW53 1432 aa15.18■□□□□ 0.02
HDLBP-245ENST00000494862 OVOS2Q6IE36 1432 aa15.18■□□□□ 0.02
HDLBP-245ENST00000494862 DIAPH1O60610 1272 aaKnown RBP15.18■□□□□ 0.02
HDLBP-245ENST00000494862 HSPA2P54652 639 aa15.18■□□□□ 0.02
HDLBP-245ENST00000494862 FKBP8Q14318 412 aa15.18■□□□□ 0.02
HDLBP-245ENST00000494862 USP31Q70CQ4 1352 aa15.18■□□□□ 0.02
HDLBP-245ENST00000494862 U2AF1L5P0DN76 240 aaPredicted RBP15.17■□□□□ 0.02
HDLBP-245ENST00000494862 U2AF1Q01081 240 aaKnown RBP eCLIP15.17■□□□□ 0.02
HDLBP-245ENST00000494862 ILDR2Q71H61 639 aa15.17■□□□□ 0.02
HDLBP-245ENST00000494862 C14orf37Q86TY3 774 aa15.17■□□□□ 0.02
HDLBP-245ENST00000494862 RBM33Q96EV2 1170 aaKnown RBP15.17■□□□□ 0.02
HDLBP-245ENST00000494862 PHF8Q9UPP1 1060 aa15.17■□□□□ 0.02
HDLBP-245ENST00000494862 NCOA3Q9Y6Q9 1424 aa15.16■□□□□ 0.02
HDLBP-245ENST00000494862 CDK12Q9NYV4 1490 aaPredicted RBP15.15■□□□□ 0.02
HDLBP-245ENST00000494862 FBLN1P23142 703 aa15.15■□□□□ 0.02
HDLBP-245ENST00000494862 CDCA7LQ96GN5 454 aa15.15■□□□□ 0.02
HDLBP-245ENST00000494862 RGPD8O14715 1765 aaPredicted RBP15.14■□□□□ 0.01
HDLBP-245ENST00000494862 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
HDLBP-245ENST00000494862 GOLGA2Q08379 1002 aa15.14■□□□□ 0.01
HDLBP-245ENST00000494862 PNNQ9H307 717 aaKnown RBP15.14■□□□□ 0.01
HDLBP-245ENST00000494862 C19orf44Q9H6X5 657 aa15.14■□□□□ 0.01
HDLBP-245ENST00000494862 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
HDLBP-245ENST00000494862 EMILIN1Q9Y6C2 1016 aa15.14■□□□□ 0.01
HDLBP-245ENST00000494862 PPM1GO15355 546 aaPredicted RBP15.13■□□□□ 0.01
HDLBP-245ENST00000494862 TCP11L2Q8N4U5 519 aa15.13■□□□□ 0.01
HDLBP-245ENST00000494862 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
HDLBP-245ENST00000494862 IQSEC2Q5JU85 1478 aa15.13■□□□□ 0.01
HDLBP-245ENST00000494862 RNF123Q5XPI4 1314 aa15.13■□□□□ 0.01
HDLBP-245ENST00000494862 ERICH6BQ5W0A0 696 aa15.12■□□□□ 0.01
HDLBP-245ENST00000494862 CERKQ8TCT0 537 aa15.12■□□□□ 0.01
HDLBP-245ENST00000494862 IL13P35225 146 aa15.11■□□□□ 0.01
HDLBP-245ENST00000494862 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
HDLBP-245ENST00000494862 SLFN5Q08AF3 891 aa15.11■□□□□ 0.01
HDLBP-245ENST00000494862 RRS1Q15050 365 aaKnown RBP15.11■□□□□ 0.01
HDLBP-245ENST00000494862 CCDC27Q2M243 656 aa15.11■□□□□ 0.01
HDLBP-245ENST00000494862 ESCO1Q5FWF5 840 aa15.11■□□□□ 0.01
HDLBP-245ENST00000494862 PLEKHF1Q96S99 279 aa15.11■□□□□ 0.01
HDLBP-245ENST00000494862 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
HDLBP-245ENST00000494862 FCHSD2O94868 740 aa15.1■□□□□ 0.01
HDLBP-245ENST00000494862 TRMT2AQ8IZ69 625 aaKnown RBP15.1■□□□□ 0.01
HDLBP-245ENST00000494862 MAP2P11137 1827 aaKnown RBP15.1■□□□□ 0.01
HDLBP-245ENST00000494862 DCCP43146 1447 aa15.09■□□□□ 0.01
HDLBP-245ENST00000494862 LRRC7Q96NW7 1537 aa15.09■□□□□ 0.01
HDLBP-245ENST00000494862 E9PSI1 815 aa15.09■□□□□ 0.01
HDLBP-245ENST00000494862 DUSP27Q5VZP5 1158 aa15.09■□□□□ 0.01
HDLBP-245ENST00000494862 WWC1Q8IX03 1113 aa15.09■□□□□ 0.01
HDLBP-245ENST00000494862 RCAN3Q9UKA8 241 aa15.09■□□□□ 0.01
HDLBP-245ENST00000494862 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0.01
HDLBP-245ENST00000494862 NLRP6P59044 892 aa15.08■□□□□ 0
HDLBP-245ENST00000494862 PSME1Q06323 249 aa15.08■□□□□ 0
HDLBP-245ENST00000494862 WDR63Q8IWG1 891 aa15.08■□□□□ 0
HDLBP-245ENST00000494862 PIK3C2AO00443 1686 aa15.08■□□□□ 0
HDLBP-245ENST00000494862 MAPK8IP3Q9UPT6 1336 aa15.08■□□□□ 0
HDLBP-245ENST00000494862 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
HDLBP-245ENST00000494862 ATF3P18847 181 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms