RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.49
GPATCH4-207ENST00000494414 NPHP3Q7Z494 1330 aa12.02□□□□□ -0.49
GPATCH4-207ENST00000494414 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.49
GPATCH4-207ENST00000494414 WASLO00401 505 aaPredicted RBP12.01□□□□□ -0.49
GPATCH4-207ENST00000494414 CENPJQ9HC77 1338 aaPredicted RBP12.01□□□□□ -0.49
GPATCH4-207ENST00000494414 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
GPATCH4-207ENST00000494414 PLCH1Q4KWH8 1693 aa12□□□□□ -0.49
GPATCH4-207ENST00000494414 NRAPQ86VF7 1730 aa12□□□□□ -0.49
GPATCH4-207ENST00000494414 NWD2Q9ULI1 1742 aa12□□□□□ -0.49
GPATCH4-207ENST00000494414 NEUROD1Q13562 356 aa12□□□□□ -0.49
GPATCH4-207ENST00000494414 MYOM1P52179 1685 aa12□□□□□ -0.49
GPATCH4-207ENST00000494414 POGKQ9P215 609 aa11.99□□□□□ -0.49
GPATCH4-207ENST00000494414 MINK1Q8N4C8 1332 aaPredicted RBP11.99□□□□□ -0.49
GPATCH4-207ENST00000494414 PIK3C2AO00443 1686 aa11.99□□□□□ -0.49
GPATCH4-207ENST00000494414 SSH2Q76I76 1423 aa11.98□□□□□ -0.49
GPATCH4-207ENST00000494414 DDX17Q92841 729 aaKnown RBP11.98□□□□□ -0.49
GPATCH4-207ENST00000494414 SPATA31A3Q5VYP0 1347 aa11.97□□□□□ -0.49
GPATCH4-207ENST00000494414 LRRC59Q96AG4 307 aaKnown RBP11.97□□□□□ -0.49
GPATCH4-207ENST00000494414 RGS17Q9UGC6 210 aaPredicted RBP11.97□□□□□ -0.49
GPATCH4-207ENST00000494414 PHF8Q9UPP1 1060 aa11.97□□□□□ -0.49
GPATCH4-207ENST00000494414 CD163L1Q9NR16 1453 aa11.96□□□□□ -0.49
GPATCH4-207ENST00000494414 DISP3Q9P2K9 1392 aa11.96□□□□□ -0.49
GPATCH4-207ENST00000494414 SAFB2Q14151 953 aaKnown RBP eCLIP11.96□□□□□ -0.49
GPATCH4-207ENST00000494414 ESCO1Q5FWF5 840 aa11.96□□□□□ -0.49
GPATCH4-207ENST00000494414 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
GPATCH4-207ENST00000494414 BRD4O60885 1362 aaPredicted RBP11.95□□□□□ -0.5
GPATCH4-207ENST00000494414 PLEKHG3A1L390 1219 aa11.95□□□□□ -0.5
GPATCH4-207ENST00000494414 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
GPATCH4-207ENST00000494414 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
GPATCH4-207ENST00000494414 HIRIP3Q9BW71 556 aaPredicted RBP11.95□□□□□ -0.5
GPATCH4-207ENST00000494414 SLIT3O75094 1523 aa11.95□□□□□ -0.5
GPATCH4-207ENST00000494414 PPIP5K1Q6PFW1 1433 aa11.94□□□□□ -0.5
GPATCH4-207ENST00000494414 LMO7Q8WWI1 1683 aa11.94□□□□□ -0.5
GPATCH4-207ENST00000494414 COL14A1Q05707 1796 aaKnown RBP11.94□□□□□ -0.5
GPATCH4-207ENST00000494414 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
GPATCH4-207ENST00000494414 ARHGEF10O15013 1369 aa11.93□□□□□ -0.5
GPATCH4-207ENST00000494414 SLIT2O94813 1529 aa11.93□□□□□ -0.5
GPATCH4-207ENST00000494414 FOXO3O43524 673 aa11.93□□□□□ -0.5
GPATCH4-207ENST00000494414 NUDT16Q96DE0 195 aaKnown RBP11.93□□□□□ -0.5
GPATCH4-207ENST00000494414 CDK19Q9BWU1 502 aa11.93□□□□□ -0.5
GPATCH4-207ENST00000494414 CDK12Q9NYV4 1490 aaPredicted RBP11.93□□□□□ -0.5
GPATCH4-207ENST00000494414 USP6P35125 1406 aa11.93□□□□□ -0.5
GPATCH4-207ENST00000494414 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
GPATCH4-207ENST00000494414 TESK2Q96S53 571 aa11.92□□□□□ -0.5
GPATCH4-207ENST00000494414 ATAD2Q6PL18 1390 aa11.92□□□□□ -0.5
GPATCH4-207ENST00000494414 PUS7Q96PZ0 661 aaKnown RBP11.91□□□□□ -0.5
GPATCH4-207ENST00000494414 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
GPATCH4-207ENST00000494414 COL18A1P39060 1754 aa11.91□□□□□ -0.5
GPATCH4-207ENST00000494414 USP47Q96K76 1375 aa11.91□□□□□ -0.5
GPATCH4-207ENST00000494414 ILDR2Q71H61 639 aa11.9□□□□□ -0.5
GPATCH4-207ENST00000494414 KRT28Q7Z3Y7 464 aa11.9□□□□□ -0.5
GPATCH4-207ENST00000494414 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
GPATCH4-207ENST00000494414 ABCC6O95255 1503 aa11.9□□□□□ -0.5
GPATCH4-207ENST00000494414 BCL9LQ86UU0 1499 aa11.89□□□□□ -0.51
GPATCH4-207ENST00000494414 EVC2Q86UK5 1308 aa11.89□□□□□ -0.51
GPATCH4-207ENST00000494414 GLI3P10071 1580 aa11.89□□□□□ -0.51
GPATCH4-207ENST00000494414 ATRNO75882 1429 aa11.89□□□□□ -0.51
GPATCH4-207ENST00000494414 PRR29P0C7W0 189 aa11.89□□□□□ -0.51
GPATCH4-207ENST00000494414 DIEXFQ68CQ4 756 aaKnown RBP11.89□□□□□ -0.51
GPATCH4-207ENST00000494414 USP19O94966 1318 aa11.88□□□□□ -0.51
GPATCH4-207ENST00000494414 WNK3Q9BYP7 1800 aa11.88□□□□□ -0.51
GPATCH4-207ENST00000494414 NFAT5O94916 1531 aa11.88□□□□□ -0.51
GPATCH4-207ENST00000494414 NINLQ9Y2I6 1382 aa11.88□□□□□ -0.51
GPATCH4-207ENST00000494414 ACEP12821 1306 aa11.87□□□□□ -0.51
GPATCH4-207ENST00000494414 XPCQ01831 940 aaPredicted RBP11.87□□□□□ -0.51
GPATCH4-207ENST00000494414 FNBP4Q8N3X1 1017 aaPredicted RBP11.87□□□□□ -0.51
GPATCH4-207ENST00000494414 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
GPATCH4-207ENST00000494414 KIF20BQ96Q89 1820 aa11.87□□□□□ -0.51
GPATCH4-207ENST00000494414 PSME1Q06323 249 aa11.86□□□□□ -0.51
GPATCH4-207ENST00000494414 POTEAQ6S8J7 498 aa11.86□□□□□ -0.51
GPATCH4-207ENST00000494414 CABP2Q9NPB3 220 aa11.86□□□□□ -0.51
GPATCH4-207ENST00000494414 THSD7AQ9UPZ6 1657 aa11.85□□□□□ -0.51
GPATCH4-207ENST00000494414 ZNF316A6NFI3 1004 aaPredicted RBP11.85□□□□□ -0.51
GPATCH4-207ENST00000494414 CHRDL2Q6WN34 429 aa11.85□□□□□ -0.51
GPATCH4-207ENST00000494414 ANKRD26Q9UPS8 1709 aa11.85□□□□□ -0.51
GPATCH4-207ENST00000494414 LTN1O94822 1766 aa11.84□□□□□ -0.51
GPATCH4-207ENST00000494414 CPDO75976 1380 aa11.84□□□□□ -0.51
GPATCH4-207ENST00000494414 OVOS2A0A0J9YW53 1432 aa11.84□□□□□ -0.51
GPATCH4-207ENST00000494414 OVOS2Q6IE36 1432 aa11.84□□□□□ -0.51
GPATCH4-207ENST00000494414 AFF2P51816 1311 aa11.84□□□□□ -0.51
GPATCH4-207ENST00000494414 USP31Q70CQ4 1352 aa11.83□□□□□ -0.52
GPATCH4-207ENST00000494414 ST20-MTHFSA0A0A6YYL1 179 aa11.83□□□□□ -0.52
GPATCH4-207ENST00000494414 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
GPATCH4-207ENST00000494414 RGS12O14924 1447 aa11.83□□□□□ -0.52
GPATCH4-207ENST00000494414 EDC4Q6P2E9 1401 aaKnown RBP11.83□□□□□ -0.52
GPATCH4-207ENST00000494414 BRWD3Q6RI45 1802 aa11.83□□□□□ -0.52
GPATCH4-207ENST00000494414 A0A1W2PP64 1363 aa11.82□□□□□ -0.52
GPATCH4-207ENST00000494414 RGPD5Q99666 1765 aa11.82□□□□□ -0.52
GPATCH4-207ENST00000494414 SLC24A1O60721 1099 aa11.81□□□□□ -0.52
GPATCH4-207ENST00000494414 ZNF772Q68DY9 489 aaPredicted RBP11.81□□□□□ -0.52
GPATCH4-207ENST00000494414 NGDNQ8NEJ9 315 aaKnown RBP11.81□□□□□ -0.52
GPATCH4-207ENST00000494414 CABP1Q9NZU7 370 aa11.81□□□□□ -0.52
GPATCH4-207ENST00000494414 FAM208AQ9UK61 1670 aaKnown RBP11.8□□□□□ -0.52
GPATCH4-207ENST00000494414 CAMTA1Q9Y6Y1 1673 aa11.8□□□□□ -0.52
GPATCH4-207ENST00000494414 TTC21AQ8NDW8 1320 aa11.8□□□□□ -0.52
GPATCH4-207ENST00000494414 PARP4Q9UKK3 1724 aaKnown RBP11.8□□□□□ -0.52
GPATCH4-207ENST00000494414 ANKRD36BQ8N2N9 1353 aa11.79□□□□□ -0.52
GPATCH4-207ENST00000494414 EP400Q96L91 3159 aa11.79□□□□□ -0.52
GPATCH4-207ENST00000494414 NUTM2BA6NNL0 878 aaPredicted RBP11.79□□□□□ -0.52
GPATCH4-207ENST00000494414 NUTM2EB1AL46 878 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 229.8 ms