RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 MYOM1P52179 1685 aa13.95□□□□□ -0.18
MACF1-222ENST00000494012 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
MACF1-222ENST00000494012 HSPA5P11021 654 aaKnown RBP13.95□□□□□ -0.18
MACF1-222ENST00000494012 LMOD2Q6P5Q4 547 aa13.95□□□□□ -0.18
MACF1-222ENST00000494012 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
MACF1-222ENST00000494012 CPSF1Q10570 1443 aaKnown RBP13.95□□□□□ -0.18
MACF1-222ENST00000494012 NUTM2BA6NNL0 878 aaPredicted RBP13.94□□□□□ -0.18
MACF1-222ENST00000494012 NUTM2EB1AL46 878 aaPredicted RBP13.94□□□□□ -0.18
MACF1-222ENST00000494012 MEX3CQ5U5Q3 659 aaKnown RBP13.94□□□□□ -0.18
MACF1-222ENST00000494012 NUTM2AQ8IVF1 878 aaPredicted RBP13.94□□□□□ -0.18
MACF1-222ENST00000494012 TMC1Q8TDI8 760 aa13.94□□□□□ -0.18
MACF1-222ENST00000494012 PHRF1Q9P1Y6 1649 aaKnown RBP13.93□□□□□ -0.18
MACF1-222ENST00000494012 TERF2IPQ9NYB0 399 aa13.93□□□□□ -0.18
MACF1-222ENST00000494012 KTN1Q86UP2 1357 aaKnown RBP13.93□□□□□ -0.18
MACF1-222ENST00000494012 CD163L1Q9NR16 1453 aa13.93□□□□□ -0.18
MACF1-222ENST00000494012 PIK3C2AO00443 1686 aa13.92□□□□□ -0.18
MACF1-222ENST00000494012 HDGFL2Q7Z4V5 671 aaPredicted RBP13.92□□□□□ -0.18
MACF1-222ENST00000494012 RGS17Q9UGC6 210 aaPredicted RBP13.92□□□□□ -0.18
MACF1-222ENST00000494012 SSH2Q76I76 1423 aa13.91□□□□□ -0.18
MACF1-222ENST00000494012 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
MACF1-222ENST00000494012 SLC12A5Q9H2X9 1139 aa13.9□□□□□ -0.18
MACF1-222ENST00000494012 A0A1W2PP64 1363 aa13.9□□□□□ -0.18
MACF1-222ENST00000494012 USP54Q70EL1 1684 aa13.9□□□□□ -0.18
MACF1-222ENST00000494012 EDC4Q6P2E9 1401 aaKnown RBP13.9□□□□□ -0.19
MACF1-222ENST00000494012 TTC21AQ8NDW8 1320 aa13.9□□□□□ -0.19
MACF1-222ENST00000494012 ANKRD36BQ8N2N9 1353 aa13.89□□□□□ -0.19
MACF1-222ENST00000494012 ABTB2Q8N961 1025 aa13.89□□□□□ -0.19
MACF1-222ENST00000494012 PLCH1Q4KWH8 1693 aa13.88□□□□□ -0.19
MACF1-222ENST00000494012 ADAMTS2O95450 1211 aa13.88□□□□□ -0.19
MACF1-222ENST00000494012 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
MACF1-222ENST00000494012 NWD2Q9ULI1 1742 aa13.87□□□□□ -0.19
MACF1-222ENST00000494012 NLRP13Q86W25 1043 aa13.87□□□□□ -0.19
MACF1-222ENST00000494012 CABLES1Q8TDN4 633 aa13.87□□□□□ -0.19
MACF1-222ENST00000494012 KIF20BQ96Q89 1820 aa13.87□□□□□ -0.19
MACF1-222ENST00000494012 TTC21BQ7Z4L5 1316 aa13.87□□□□□ -0.19
MACF1-222ENST00000494012 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.87□□□□□ -0.19
MACF1-222ENST00000494012 COL14A1Q05707 1796 aaKnown RBP13.86□□□□□ -0.19
MACF1-222ENST00000494012 SLIT3O75094 1523 aa13.86□□□□□ -0.19
MACF1-222ENST00000494012 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
MACF1-222ENST00000494012 C8orf37Q96NL8 207 aa13.86□□□□□ -0.19
MACF1-222ENST00000494012 USP19O94966 1318 aa13.86□□□□□ -0.19
MACF1-222ENST00000494012 ZNF772Q68DY9 489 aaPredicted RBP13.85□□□□□ -0.19
MACF1-222ENST00000494012 NGLY1Q96IV0 654 aa13.85□□□□□ -0.19
MACF1-222ENST00000494012 NLRP6P59044 892 aa13.84□□□□□ -0.19
MACF1-222ENST00000494012 NUTM2GQ5VZR2 741 aa13.84□□□□□ -0.19
MACF1-222ENST00000494012 POTEAQ6S8J7 498 aa13.84□□□□□ -0.19
MACF1-222ENST00000494012 POLR3GLQ9BT43 218 aa13.84□□□□□ -0.19
MACF1-222ENST00000494012 AFF2P51816 1311 aa13.84□□□□□ -0.19
MACF1-222ENST00000494012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.83□□□□□ -0.2
MACF1-222ENST00000494012 USP31Q70CQ4 1352 aa13.82□□□□□ -0.2
MACF1-222ENST00000494012 NRAPQ86VF7 1730 aa13.81□□□□□ -0.2
MACF1-222ENST00000494012 SLIT2O94813 1529 aa13.81□□□□□ -0.2
MACF1-222ENST00000494012 FNBP4Q8N3X1 1017 aaPredicted RBP13.81□□□□□ -0.2
MACF1-222ENST00000494012 KCNH5Q8NCM2 988 aa13.81□□□□□ -0.2
MACF1-222ENST00000494012 KIF7Q2M1P5 1343 aa13.81□□□□□ -0.2
MACF1-222ENST00000494012 CPDO75976 1380 aa13.81□□□□□ -0.2
MACF1-222ENST00000494012 OVOS2A0A0J9YW53 1432 aa13.81□□□□□ -0.2
MACF1-222ENST00000494012 OVOS2Q6IE36 1432 aa13.81□□□□□ -0.2
MACF1-222ENST00000494012 GCP02774 474 aa13.8□□□□□ -0.2
MACF1-222ENST00000494012 NME9Q86XW9 330 aa13.8□□□□□ -0.2
MACF1-222ENST00000494012 PRDM11Q9NQV5 511 aa13.8□□□□□ -0.2
MACF1-222ENST00000494012 USP21Q9UK80 565 aa13.8□□□□□ -0.2
MACF1-222ENST00000494012 ANKRD26Q9UPS8 1709 aa13.8□□□□□ -0.2
MACF1-222ENST00000494012 LTN1O94822 1766 aa13.8□□□□□ -0.2
MACF1-222ENST00000494012 KIAA0232Q92628 1395 aa13.8□□□□□ -0.2
MACF1-222ENST00000494012 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
MACF1-222ENST00000494012 NFAT5O94916 1531 aa13.8□□□□□ -0.2
MACF1-222ENST00000494012 LMO7Q8WWI1 1683 aa13.79□□□□□ -0.2
MACF1-222ENST00000494012 C11orf95C9JLR9 678 aaPredicted RBP13.79□□□□□ -0.2
MACF1-222ENST00000494012 BCL9LQ86UU0 1499 aa13.79□□□□□ -0.2
MACF1-222ENST00000494012 ABCC6O95255 1503 aa13.79□□□□□ -0.2
MACF1-222ENST00000494012 CCDC7Q96M83 1385 aa13.78□□□□□ -0.2
MACF1-222ENST00000494012 FAM83GA6ND36 823 aa13.77□□□□□ -0.21
MACF1-222ENST00000494012 ZC3H6P61129 1189 aaKnown RBP13.77□□□□□ -0.21
MACF1-222ENST00000494012 COG3Q96JB2 828 aa13.77□□□□□ -0.21
MACF1-222ENST00000494012 TRPC5Q9UL62 973 aaPredicted RBP13.77□□□□□ -0.21
MACF1-222ENST00000494012 ATRNO75882 1429 aa13.76□□□□□ -0.21
MACF1-222ENST00000494012 CGNL1Q0VF96 1302 aa13.76□□□□□ -0.21
MACF1-222ENST00000494012 UNC5CLQ8IV45 518 aa13.76□□□□□ -0.21
MACF1-222ENST00000494012 CARD14Q9BXL6 1004 aa13.76□□□□□ -0.21
MACF1-222ENST00000494012 WASHC2AQ641Q2 1341 aa13.75□□□□□ -0.21
MACF1-222ENST00000494012 BTG4Q9NY30 223 aa13.75□□□□□ -0.21
MACF1-222ENST00000494012 COL18A1P39060 1754 aa13.75□□□□□ -0.21
MACF1-222ENST00000494012 CDK12Q9NYV4 1490 aaPredicted RBP13.74□□□□□ -0.21
MACF1-222ENST00000494012 AATKQ6ZMQ8 1374 aa13.74□□□□□ -0.21
MACF1-222ENST00000494012 FYB1O15117 783 aa13.74□□□□□ -0.21
MACF1-222ENST00000494012 SOX12O15370 315 aa13.74□□□□□ -0.21
MACF1-222ENST00000494012 QTRT2Q9H974 415 aaKnown RBP13.74□□□□□ -0.21
MACF1-222ENST00000494012 PANK3Q9H999 370 aa13.74□□□□□ -0.21
MACF1-222ENST00000494012 ZRANB1Q9UGI0 708 aa13.74□□□□□ -0.21
MACF1-222ENST00000494012 RGPD5Q99666 1765 aa13.73□□□□□ -0.21
MACF1-222ENST00000494012 NSD2O96028 1365 aa13.73□□□□□ -0.21
MACF1-222ENST00000494012 CAMTA1Q9Y6Y1 1673 aa13.73□□□□□ -0.21
MACF1-222ENST00000494012 RXRBP28702 533 aa13.73□□□□□ -0.21
MACF1-222ENST00000494012 CHRNA2Q15822 529 aa13.73□□□□□ -0.21
MACF1-222ENST00000494012 ZBTB7CA1YPR0 619 aa13.72□□□□□ -0.21
MACF1-222ENST00000494012 RBM6P78332 1123 aaKnown RBP13.72□□□□□ -0.21
MACF1-222ENST00000494012 VPS72Q15906 364 aa13.72□□□□□ -0.21
MACF1-222ENST00000494012 ARHGEF25Q86VW2 580 aa13.72□□□□□ -0.21
MACF1-222ENST00000494012 GGNBP2Q9H3C7 697 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms