RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CRYBG1Q9Y4K1 1723 aa26.11■■□□□ 1.77
NUP50-218ENST00000493456 THSD7AQ9UPZ6 1657 aa26.1■■□□□ 1.77
NUP50-218ENST00000493456 PSDA5PKW4 1024 aaPredicted RBP26.1■■□□□ 1.77
NUP50-218ENST00000493456 HRCP23327 699 aa26.1■■□□□ 1.77
NUP50-218ENST00000493456 TRAK1Q9UPV9 953 aa26.1■■□□□ 1.77
NUP50-218ENST00000493456 PRR36Q9H6K5 1346 aa26.1■■□□□ 1.77
NUP50-218ENST00000493456 DISP2A7MBM2 1401 aa26.09■■□□□ 1.77
NUP50-218ENST00000493456 MINK1Q8N4C8 1332 aaPredicted RBP26.08■■□□□ 1.77
NUP50-218ENST00000493456 WASLO00401 505 aaPredicted RBP26.07■■□□□ 1.76
NUP50-218ENST00000493456 NGDNQ8NEJ9 315 aaKnown RBP26.06■■□□□ 1.76
NUP50-218ENST00000493456 EN1Q05925 392 aaPredicted RBP26.05■■□□□ 1.76
NUP50-218ENST00000493456 PRDM11Q9NQV5 511 aa26.05■■□□□ 1.76
NUP50-218ENST00000493456 TNS1Q9HBL0 1735 aaKnown RBP26.04■■□□□ 1.76
NUP50-218ENST00000493456 ITSN1Q15811 1721 aa26.03■■□□□ 1.76
NUP50-218ENST00000493456 PAK3O75914 559 aaPredicted RBP26.03■■□□□ 1.76
NUP50-218ENST00000493456 STAC3Q96MF2 364 aa26.02■■□□□ 1.76
NUP50-218ENST00000493456 ATP7BP35670 1465 aa26.01■■□□□ 1.75
NUP50-218ENST00000493456 FAM182BQ5T319 152 aa26.01■■□□□ 1.75
NUP50-218ENST00000493456 SPATA31A1Q5TZJ5 1347 aa26■■□□□ 1.75
NUP50-218ENST00000493456 RAB3GAP2Q9H2M9 1393 aa25.99■■□□□ 1.75
NUP50-218ENST00000493456 PHRF1Q9P1Y6 1649 aaKnown RBP25.99■■□□□ 1.75
NUP50-218ENST00000493456 KIAA0232Q92628 1395 aa25.98■■□□□ 1.75
NUP50-218ENST00000493456 R3HDM1Q15032 1099 aaKnown RBP25.98■■□□□ 1.75
NUP50-218ENST00000493456 DCAF11Q8TEB1 546 aa25.97■■□□□ 1.75
NUP50-218ENST00000493456 ARHGEF28Q8N1W1 1705 aaKnown RBP25.97■■□□□ 1.75
NUP50-218ENST00000493456 FAM196AQ6ZSG2 479 aa25.96■■□□□ 1.75
NUP50-218ENST00000493456 KDM2AQ9Y2K7 1162 aa25.96■■□□□ 1.75
NUP50-218ENST00000493456 PARD3Q8TEW0 1356 aa25.95■■□□□ 1.75
NUP50-218ENST00000493456 NUDT16Q96DE0 195 aaKnown RBP25.94■■□□□ 1.74
NUP50-218ENST00000493456 EZH2Q15910 746 aaKnown RBP25.93■■□□□ 1.74
NUP50-218ENST00000493456 CAMKK2Q96RR4 588 aa25.92■■□□□ 1.74
NUP50-218ENST00000493456 TRIM37O94972 964 aa25.91■■□□□ 1.74
NUP50-218ENST00000493456 CHRNA2Q15822 529 aa25.91■■□□□ 1.74
NUP50-218ENST00000493456 STRN4Q9NRL3 753 aa25.91■■□□□ 1.74
NUP50-218ENST00000493456 POLR3AO14802 1390 aaPredicted RBP25.9■■□□□ 1.74
NUP50-218ENST00000493456 TOPAZ1Q8N9V7 1692 aa25.9■■□□□ 1.74
NUP50-218ENST00000493456 BARGINQ6ZT62 677 aa25.89■■□□□ 1.74
NUP50-218ENST00000493456 SSH2Q76I76 1423 aa25.88■■□□□ 1.73
NUP50-218ENST00000493456 ZC3H6P61129 1189 aaKnown RBP25.88■■□□□ 1.73
NUP50-218ENST00000493456 NRKQ7Z2Y5 1582 aa25.87■■□□□ 1.73
NUP50-218ENST00000493456 APBA3O96018 575 aa25.87■■□□□ 1.73
NUP50-218ENST00000493456 RREB1Q92766 1687 aa25.87■■□□□ 1.73
NUP50-218ENST00000493456 EVA1CP58658 441 aa25.85■■□□□ 1.73
NUP50-218ENST00000493456 PDE3BQ13370 1112 aa25.85■■□□□ 1.73
NUP50-218ENST00000493456 CDK19Q9BWU1 502 aa25.85■■□□□ 1.73
NUP50-218ENST00000493456 USP35Q9P2H5 1018 aa25.85■■□□□ 1.73
NUP50-218ENST00000493456 ACEP12821 1306 aa25.85■■□□□ 1.73
NUP50-218ENST00000493456 CPDO75976 1380 aa25.84■■□□□ 1.73
NUP50-218ENST00000493456 NUTM2GQ5VZR2 741 aa25.84■■□□□ 1.73
NUP50-218ENST00000493456 CCDC61Q9Y6R9 512 aa25.84■■□□□ 1.73
NUP50-218ENST00000493456 NBPF8Q3BBV2 869 aa25.83■■□□□ 1.73
NUP50-218ENST00000493456 LMO7Q8WWI1 1683 aa25.83■■□□□ 1.73
NUP50-218ENST00000493456 PLEKHG3A1L390 1219 aa25.82■■□□□ 1.72
NUP50-218ENST00000493456 CAMTA1Q9Y6Y1 1673 aa25.82■■□□□ 1.72
NUP50-218ENST00000493456 NUP188Q5SRE5 1749 aa25.82■■□□□ 1.72
NUP50-218ENST00000493456 TCP11L2Q8N4U5 519 aa25.81■■□□□ 1.72
NUP50-218ENST00000493456 USP19O94966 1318 aa25.81■■□□□ 1.72
NUP50-218ENST00000493456 ABTB2Q8N961 1025 aa25.8■■□□□ 1.72
NUP50-218ENST00000493456 THRAP3Q9Y2W1 955 aaKnown RBP25.8■■□□□ 1.72
NUP50-218ENST00000493456 KIAA1210Q9ULL0 1709 aa25.8■■□□□ 1.72
NUP50-218ENST00000493456 NBPF14Q5TI25 921 aa25.79■■□□□ 1.72
NUP50-218ENST00000493456 LARP1Q6PKG0 1096 aaKnown RBP25.79■■□□□ 1.72
NUP50-218ENST00000493456 C11orf95C9JLR9 678 aaPredicted RBP25.77■■□□□ 1.72
NUP50-218ENST00000493456 PARP4Q9UKK3 1724 aaKnown RBP25.77■■□□□ 1.72
NUP50-218ENST00000493456 COL5A2P05997 1499 aaPredicted RBP25.74■■□□□ 1.71
NUP50-218ENST00000493456 NLRP13Q86W25 1043 aa25.74■■□□□ 1.71
NUP50-218ENST00000493456 BRD4O60885 1362 aaPredicted RBP25.73■■□□□ 1.71
NUP50-218ENST00000493456 GCP02774 474 aa25.72■■□□□ 1.71
NUP50-218ENST00000493456 PPIP5K1Q6PFW1 1433 aa25.71■■□□□ 1.71
NUP50-218ENST00000493456 CRB1P82279 1406 aa25.71■■□□□ 1.71
NUP50-218ENST00000493456 OVOS2A0A0G2JMS6 1433 aa25.7■■□□□ 1.7
NUP50-218ENST00000493456 OVOS2A0A0J9YW53 1432 aa25.7■■□□□ 1.7
NUP50-218ENST00000493456 OVOS2Q6IE36 1432 aa25.7■■□□□ 1.7
NUP50-218ENST00000493456 RGPD3A6NKT7 1758 aaPredicted RBP25.69■■□□□ 1.7
NUP50-218ENST00000493456 RGPD4Q7Z3J3 1758 aa25.69■■□□□ 1.7
NUP50-218ENST00000493456 SRPK2P78362 688 aaKnown RBP25.68■■□□□ 1.7
NUP50-218ENST00000493456 SPON1Q9HCB6 807 aa25.68■■□□□ 1.7
NUP50-218ENST00000493456 PEAK1Q9H792 1746 aa25.66■■□□□ 1.7
NUP50-218ENST00000493456 PPP1R1BQ9UD71 204 aaPredicted RBP25.66■■□□□ 1.7
NUP50-218ENST00000493456 CENPJQ9HC77 1338 aaPredicted RBP25.65■■□□□ 1.7
NUP50-218ENST00000493456 YY1P25490 414 aa25.65■■□□□ 1.7
NUP50-218ENST00000493456 AATKQ6ZMQ8 1374 aa25.65■■□□□ 1.7
NUP50-218ENST00000493456 NINLQ9Y2I6 1382 aa25.65■■□□□ 1.7
NUP50-218ENST00000493456 SLIT3O75094 1523 aa25.64■■□□□ 1.7
NUP50-218ENST00000493456 LRRC37A3O60309 1634 aa25.64■■□□□ 1.7
NUP50-218ENST00000493456 KCNQ2O43526 872 aa25.64■■□□□ 1.7
NUP50-218ENST00000493456 USP6P35125 1406 aa25.63■■□□□ 1.69
NUP50-218ENST00000493456 NBPF1Q3BBV0 1214 aa25.63■■□□□ 1.69
NUP50-218ENST00000493456 PLSCR1O15162 318 aa25.62■■□□□ 1.69
NUP50-218ENST00000493456 CABP2Q9NPB3 220 aa25.62■■□□□ 1.69
NUP50-218ENST00000493456 QRICH2Q9H0J4 1663 aa25.61■■□□□ 1.69
NUP50-218ENST00000493456 DCAF8L1A6NGE4 600 aa25.6■■□□□ 1.69
NUP50-218ENST00000493456 DDB1Q16531 1140 aa25.6■■□□□ 1.69
NUP50-218ENST00000493456 SBF2Q86WG5 1849 aa25.59■■□□□ 1.69
NUP50-218ENST00000493456 NLRP6P59044 892 aa25.59■■□□□ 1.69
NUP50-218ENST00000493456 ZBTB7CA1YPR0 619 aa25.58■■□□□ 1.69
NUP50-218ENST00000493456 WNK3Q9BYP7 1800 aa25.58■■□□□ 1.68
NUP50-218ENST00000493456 TOM1L2Q6ZVM7 507 aa25.57■■□□□ 1.68
NUP50-218ENST00000493456 BCL9O00512 1426 aa25.56■■□□□ 1.68
NUP50-218ENST00000493456 PIK3C2AO00443 1686 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms