RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 DISP2A7MBM2 1401 aa16.19■□□□□ 0.18
SNRNP200-207ENST00000493271 SPATA31A5Q5VU36 1347 aa16.19■□□□□ 0.18
SNRNP200-207ENST00000493271 SPATA31A7Q8IWB4 1347 aa16.19■□□□□ 0.18
SNRNP200-207ENST00000493271 NGDNQ8NEJ9 315 aaKnown RBP16.17■□□□□ 0.18
SNRNP200-207ENST00000493271 PRR36Q9H6K5 1346 aa16.17■□□□□ 0.18
SNRNP200-207ENST00000493271 THSD7AQ9UPZ6 1657 aa16.16■□□□□ 0.18
SNRNP200-207ENST00000493271 HRCP23327 699 aa16.16■□□□□ 0.18
SNRNP200-207ENST00000493271 HIRIP3Q9BW71 556 aaPredicted RBP16.16■□□□□ 0.18
SNRNP200-207ENST00000493271 PRDM11Q9NQV5 511 aa16.16■□□□□ 0.18
SNRNP200-207ENST00000493271 ITSN1Q15811 1721 aa16.16■□□□□ 0.18
SNRNP200-207ENST00000493271 CRYBG1Q9Y4K1 1723 aa16.16■□□□□ 0.18
SNRNP200-207ENST00000493271 MINK1Q8N4C8 1332 aaPredicted RBP16.16■□□□□ 0.18
SNRNP200-207ENST00000493271 ATP7BP35670 1465 aa16.16■□□□□ 0.18
SNRNP200-207ENST00000493271 RAB3GAP2Q9H2M9 1393 aa16.14■□□□□ 0.17
SNRNP200-207ENST00000493271 PAK3O75914 559 aaPredicted RBP16.14■□□□□ 0.17
SNRNP200-207ENST00000493271 PARD3Q8TEW0 1356 aa16.13■□□□□ 0.17
SNRNP200-207ENST00000493271 DCAF11Q8TEB1 546 aa16.13■□□□□ 0.17
SNRNP200-207ENST00000493271 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
SNRNP200-207ENST00000493271 EN1Q05925 392 aaPredicted RBP16.12■□□□□ 0.17
SNRNP200-207ENST00000493271 FAM196AQ6ZSG2 479 aa16.12■□□□□ 0.17
SNRNP200-207ENST00000493271 SPATA31A1Q5TZJ5 1347 aa16.12■□□□□ 0.17
SNRNP200-207ENST00000493271 KIAA0232Q92628 1395 aa16.11■□□□□ 0.17
SNRNP200-207ENST00000493271 NUDT16Q96DE0 195 aaKnown RBP16.1■□□□□ 0.17
SNRNP200-207ENST00000493271 TNS1Q9HBL0 1735 aaKnown RBP16.1■□□□□ 0.17
SNRNP200-207ENST00000493271 PHRF1Q9P1Y6 1649 aaKnown RBP16.09■□□□□ 0.17
SNRNP200-207ENST00000493271 ARHGEF28Q8N1W1 1705 aaKnown RBP16.09■□□□□ 0.17
SNRNP200-207ENST00000493271 KDM2AQ9Y2K7 1162 aa16.09■□□□□ 0.17
SNRNP200-207ENST00000493271 POLR3AO14802 1390 aaPredicted RBP16.09■□□□□ 0.17
SNRNP200-207ENST00000493271 BARGINQ6ZT62 677 aa16.08■□□□□ 0.16
SNRNP200-207ENST00000493271 C11orf95C9JLR9 678 aaPredicted RBP16.07■□□□□ 0.16
SNRNP200-207ENST00000493271 R3HDM1Q15032 1099 aaKnown RBP16.07■□□□□ 0.16
SNRNP200-207ENST00000493271 CCDC61Q9Y6R9 512 aa16.07■□□□□ 0.16
SNRNP200-207ENST00000493271 FAM182BQ5T319 152 aa16.06■□□□□ 0.16
SNRNP200-207ENST00000493271 CAMKK2Q96RR4 588 aa16.06■□□□□ 0.16
SNRNP200-207ENST00000493271 CPDO75976 1380 aa16.05■□□□□ 0.16
SNRNP200-207ENST00000493271 PLEKHG3A1L390 1219 aa16.05■□□□□ 0.16
SNRNP200-207ENST00000493271 EZH2Q15910 746 aaKnown RBP16.05■□□□□ 0.16
SNRNP200-207ENST00000493271 CDK19Q9BWU1 502 aa16.05■□□□□ 0.16
SNRNP200-207ENST00000493271 STRN4Q9NRL3 753 aa16.05■□□□□ 0.16
SNRNP200-207ENST00000493271 THRAP3Q9Y2W1 955 aaKnown RBP16.05■□□□□ 0.16
SNRNP200-207ENST00000493271 TOPAZ1Q8N9V7 1692 aa16.05■□□□□ 0.16
SNRNP200-207ENST00000493271 SSH2Q76I76 1423 aa16.04■□□□□ 0.16
SNRNP200-207ENST00000493271 BRD4O60885 1362 aaPredicted RBP16.04■□□□□ 0.16
SNRNP200-207ENST00000493271 TRIM37O94972 964 aa16.04■□□□□ 0.16
SNRNP200-207ENST00000493271 EVA1CP58658 441 aa16.04■□□□□ 0.16
SNRNP200-207ENST00000493271 PDE3BQ13370 1112 aa16.04■□□□□ 0.16
SNRNP200-207ENST00000493271 CHRNA2Q15822 529 aa16.04■□□□□ 0.16
SNRNP200-207ENST00000493271 KIAA1210Q9ULL0 1709 aa16.03■□□□□ 0.16
SNRNP200-207ENST00000493271 ACEP12821 1306 aa16.03■□□□□ 0.16
SNRNP200-207ENST00000493271 APBA3O96018 575 aa16.03■□□□□ 0.16
SNRNP200-207ENST00000493271 ZC3H6P61129 1189 aaKnown RBP16.03■□□□□ 0.16
SNRNP200-207ENST00000493271 NBPF8Q3BBV2 869 aa16.03■□□□□ 0.16
SNRNP200-207ENST00000493271 NRKQ7Z2Y5 1582 aa16.03■□□□□ 0.16
SNRNP200-207ENST00000493271 TCP11L2Q8N4U5 519 aa16.02■□□□□ 0.16
SNRNP200-207ENST00000493271 ABTB2Q8N961 1025 aa16.02■□□□□ 0.16
SNRNP200-207ENST00000493271 USP19O94966 1318 aa16.01■□□□□ 0.15
SNRNP200-207ENST00000493271 NBPF14Q5TI25 921 aa16.01■□□□□ 0.15
SNRNP200-207ENST00000493271 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
SNRNP200-207ENST00000493271 LMO7Q8WWI1 1683 aa16■□□□□ 0.15
SNRNP200-207ENST00000493271 RREB1Q92766 1687 aa16■□□□□ 0.15
SNRNP200-207ENST00000493271 USP35Q9P2H5 1018 aa16■□□□□ 0.15
SNRNP200-207ENST00000493271 CAMTA1Q9Y6Y1 1673 aa15.99■□□□□ 0.15
SNRNP200-207ENST00000493271 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
SNRNP200-207ENST00000493271 LARP1Q6PKG0 1096 aaKnown RBP15.97■□□□□ 0.15
SNRNP200-207ENST00000493271 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
SNRNP200-207ENST00000493271 PARP4Q9UKK3 1724 aaKnown RBP15.97■□□□□ 0.15
SNRNP200-207ENST00000493271 PPIP5K1Q6PFW1 1433 aa15.96■□□□□ 0.15
SNRNP200-207ENST00000493271 GCP02774 474 aa15.96■□□□□ 0.15
SNRNP200-207ENST00000493271 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.15
SNRNP200-207ENST00000493271 CRB1P82279 1406 aa15.95■□□□□ 0.14
SNRNP200-207ENST00000493271 SRPK2P78362 688 aaKnown RBP15.95■□□□□ 0.14
SNRNP200-207ENST00000493271 CENPJQ9HC77 1338 aaPredicted RBP15.94■□□□□ 0.14
SNRNP200-207ENST00000493271 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
SNRNP200-207ENST00000493271 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
SNRNP200-207ENST00000493271 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
SNRNP200-207ENST00000493271 RGPD3A6NKT7 1758 aaPredicted RBP15.93■□□□□ 0.14
SNRNP200-207ENST00000493271 RGPD4Q7Z3J3 1758 aa15.93■□□□□ 0.14
SNRNP200-207ENST00000493271 AATKQ6ZMQ8 1374 aa15.93■□□□□ 0.14
SNRNP200-207ENST00000493271 SPON1Q9HCB6 807 aa15.93■□□□□ 0.14
SNRNP200-207ENST00000493271 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
SNRNP200-207ENST00000493271 PLSCR1O15162 318 aa15.92■□□□□ 0.14
SNRNP200-207ENST00000493271 NINLQ9Y2I6 1382 aa15.91■□□□□ 0.14
SNRNP200-207ENST00000493271 SLIT3O75094 1523 aa15.91■□□□□ 0.14
SNRNP200-207ENST00000493271 CDCA7Q9BWT1 371 aaPredicted RBP15.91■□□□□ 0.14
SNRNP200-207ENST00000493271 USP6P35125 1406 aa15.91■□□□□ 0.14
SNRNP200-207ENST00000493271 KCNQ2O43526 872 aa15.9■□□□□ 0.14
SNRNP200-207ENST00000493271 DDB1Q16531 1140 aa15.9■□□□□ 0.14
SNRNP200-207ENST00000493271 PPP1R1BQ9UD71 204 aaPredicted RBP15.9■□□□□ 0.14
SNRNP200-207ENST00000493271 BCL9O00512 1426 aa15.89■□□□□ 0.13
SNRNP200-207ENST00000493271 NLRP6P59044 892 aa15.89■□□□□ 0.13
SNRNP200-207ENST00000493271 NBPF1Q3BBV0 1214 aa15.89■□□□□ 0.13
SNRNP200-207ENST00000493271 PEAK1Q9H792 1746 aa15.88■□□□□ 0.13
SNRNP200-207ENST00000493271 CABP2Q9NPB3 220 aa15.88■□□□□ 0.13
SNRNP200-207ENST00000493271 LRRC37A3O60309 1634 aa15.87■□□□□ 0.13
SNRNP200-207ENST00000493271 QRICH2Q9H0J4 1663 aa15.87■□□□□ 0.13
SNRNP200-207ENST00000493271 YY1P25490 414 aa15.87■□□□□ 0.13
SNRNP200-207ENST00000493271 TOM1L2Q6ZVM7 507 aa15.87■□□□□ 0.13
SNRNP200-207ENST00000493271 KCNH5Q8NCM2 988 aa15.87■□□□□ 0.13
SNRNP200-207ENST00000493271 BCL11BQ9C0K0 894 aaPredicted RBP15.87■□□□□ 0.13
SNRNP200-207ENST00000493271 WDR17Q8IZU2 1322 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms