RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 NME9Q86XW9 330 aa29.88■■■□□ 2.37
PSPC1-204ENST00000492741 KIF1AQ12756 1690 aa29.87■■■□□ 2.37
PSPC1-204ENST00000492741 TTC21AQ8NDW8 1320 aa29.86■■■□□ 2.37
PSPC1-204ENST00000492741 MYBBP1AQ9BQG0 1328 aaKnown RBP29.86■■■□□ 2.37
PSPC1-204ENST00000492741 XPCQ01831 940 aaPredicted RBP29.86■■■□□ 2.37
PSPC1-204ENST00000492741 BRINP3Q76B58 766 aa29.86■■■□□ 2.37
PSPC1-204ENST00000492741 CCER2I3L3R5 266 aa29.85■■■□□ 2.37
PSPC1-204ENST00000492741 TNNT2P45379 298 aaPredicted RBP29.85■■■□□ 2.37
PSPC1-204ENST00000492741 KRT28Q7Z3Y7 464 aa29.85■■■□□ 2.37
PSPC1-204ENST00000492741 SSH2Q76I76 1423 aa29.83■■■□□ 2.37
PSPC1-204ENST00000492741 COG3Q96JB2 828 aa29.83■■■□□ 2.37
PSPC1-204ENST00000492741 NPHP3Q7Z494 1330 aa29.83■■■□□ 2.37
PSPC1-204ENST00000492741 BRD4O60885 1362 aaPredicted RBP29.83■■■□□ 2.37
PSPC1-204ENST00000492741 DDX17Q92841 729 aaKnown RBP29.82■■■□□ 2.36
PSPC1-204ENST00000492741 ZRANB1Q9UGI0 708 aa29.82■■■□□ 2.36
PSPC1-204ENST00000492741 KIF20BQ96Q89 1820 aa29.82■■■□□ 2.36
PSPC1-204ENST00000492741 NRKQ7Z2Y5 1582 aa29.82■■■□□ 2.36
PSPC1-204ENST00000492741 ABTB2Q8N961 1025 aa29.8■■■□□ 2.36
PSPC1-204ENST00000492741 TOM1O60784 492 aa29.79■■■□□ 2.36
PSPC1-204ENST00000492741 PPP2R1AP30153 589 aa29.78■■■□□ 2.36
PSPC1-204ENST00000492741 NLRP13Q86W25 1043 aa29.78■■■□□ 2.36
PSPC1-204ENST00000492741 LMOD2Q6P5Q4 547 aa29.77■■■□□ 2.36
PSPC1-204ENST00000492741 NLRP6P59044 892 aa29.76■■■□□ 2.36
PSPC1-204ENST00000492741 NUTM2GQ5VZR2 741 aa29.76■■■□□ 2.36
PSPC1-204ENST00000492741 MRS2Q9HD23 443 aa29.76■■■□□ 2.36
PSPC1-204ENST00000492741 CERKQ8TCT0 537 aa29.75■■■□□ 2.35
PSPC1-204ENST00000492741 ANKRD26Q9UPS8 1709 aa29.73■■■□□ 2.35
PSPC1-204ENST00000492741 UBAP1LF5GYI3 381 aa29.73■■■□□ 2.35
PSPC1-204ENST00000492741 CCDC184Q52MB2 194 aa29.73■■■□□ 2.35
PSPC1-204ENST00000492741 PIP4K2BP78356 416 aa29.71■■■□□ 2.35
PSPC1-204ENST00000492741 SCAF1Q9H7N4 1312 aaKnown RBP29.7■■■□□ 2.35
PSPC1-204ENST00000492741 USP31Q70CQ4 1352 aa29.69■■■□□ 2.34
PSPC1-204ENST00000492741 IQSEC2Q5JU85 1478 aa29.69■■■□□ 2.34
PSPC1-204ENST00000492741 OVOS2A0A0J9YW53 1432 aa29.68■■■□□ 2.34
PSPC1-204ENST00000492741 OVOS2Q6IE36 1432 aa29.68■■■□□ 2.34
PSPC1-204ENST00000492741 PIK3C2AO00443 1686 aa29.68■■■□□ 2.34
PSPC1-204ENST00000492741 SBNO1A3KN83 1393 aa29.68■■■□□ 2.34
PSPC1-204ENST00000492741 SOX12O15370 315 aa29.68■■■□□ 2.34
PSPC1-204ENST00000492741 PLEKHG5O94827 1062 aa29.66■■■□□ 2.34
PSPC1-204ENST00000492741 FBLN1P23142 703 aa29.66■■■□□ 2.34
PSPC1-204ENST00000492741 MTHFSP49914 203 aa29.66■■■□□ 2.34
PSPC1-204ENST00000492741 PXDNQ92626 1479 aa29.66■■■□□ 2.34
PSPC1-204ENST00000492741 TRPM3Q9HCF6 1732 aaPredicted RBP29.65■■■□□ 2.34
PSPC1-204ENST00000492741 SOS2Q07890 1332 aaPredicted RBP29.65■■■□□ 2.34
PSPC1-204ENST00000492741 ROBO1Q9Y6N7 1651 aa29.65■■■□□ 2.34
PSPC1-204ENST00000492741 PPM1GO15355 546 aaPredicted RBP29.62■■■□□ 2.33
PSPC1-204ENST00000492741 SPATA31A3Q5VYP0 1347 aa29.62■■■□□ 2.33
PSPC1-204ENST00000492741 TNS3Q68CZ2 1445 aa29.62■■■□□ 2.33
PSPC1-204ENST00000492741 CFAP53Q96M91 514 aa29.61■■■□□ 2.33
PSPC1-204ENST00000492741 RRS1Q15050 365 aaKnown RBP29.6■■■□□ 2.33
PSPC1-204ENST00000492741 AATKQ6ZMQ8 1374 aa29.6■■■□□ 2.33
PSPC1-204ENST00000492741 POLKQ9UBT6 870 aa29.59■■■□□ 2.33
PSPC1-204ENST00000492741 NHSL1Q5SYE7 1610 aa29.59■■■□□ 2.33
PSPC1-204ENST00000492741 ARHGEF10O15013 1369 aa29.59■■■□□ 2.33
PSPC1-204ENST00000492741 FAM9BQ8IZU0 186 aa29.59■■■□□ 2.33
PSPC1-204ENST00000492741 KCNH5Q8NCM2 988 aa29.57■■■□□ 2.32
PSPC1-204ENST00000492741 EMILIN1Q9Y6C2 1016 aa29.57■■■□□ 2.32
PSPC1-204ENST00000492741 ALS2Q96Q42 1657 aa29.56■■■□□ 2.32
PSPC1-204ENST00000492741 LRRC59Q96AG4 307 aaKnown RBP29.54■■■□□ 2.32
PSPC1-204ENST00000492741 USP54Q70EL1 1684 aa29.54■■■□□ 2.32
PSPC1-204ENST00000492741 MAP2P11137 1827 aaKnown RBP29.54■■■□□ 2.32
PSPC1-204ENST00000492741 GCP02774 474 aa29.54■■■□□ 2.32
PSPC1-204ENST00000492741 PNISRQ8TF01 805 aaKnown RBP29.53■■■□□ 2.32
PSPC1-204ENST00000492741 AHDC1Q5TGY3 1603 aaPredicted RBP29.52■■■□□ 2.32
PSPC1-204ENST00000492741 USP19O94966 1318 aa29.52■■■□□ 2.32
PSPC1-204ENST00000492741 MARF1Q9Y4F3 1742 aaKnown RBP29.51■■■□□ 2.31
PSPC1-204ENST00000492741 AMPHP49418 695 aa29.51■■■□□ 2.31
PSPC1-204ENST00000492741 WDR43Q15061 677 aaKnown RBP eCLIP29.51■■■□□ 2.31
PSPC1-204ENST00000492741 ZBTB7CA1YPR0 619 aa29.5■■■□□ 2.31
PSPC1-204ENST00000492741 CABLES1Q8TDN4 633 aa29.5■■■□□ 2.31
PSPC1-204ENST00000492741 MAP3K19Q56UN5 1328 aa29.5■■■□□ 2.31
PSPC1-204ENST00000492741 HAP1P54257 671 aaPredicted RBP29.48■■■□□ 2.31
PSPC1-204ENST00000492741 YTHDC1Q96MU7 727 aaKnown RBP29.48■■■□□ 2.31
PSPC1-204ENST00000492741 SLIT3O75094 1523 aa29.46■■■□□ 2.31
PSPC1-204ENST00000492741 PHLPP1O60346 1717 aa29.46■■■□□ 2.31
PSPC1-204ENST00000492741 SMG6Q86US8 1419 aaKnown RBP29.46■■■□□ 2.31
PSPC1-204ENST00000492741 DIAPH1O60610 1272 aaKnown RBP29.45■■■□□ 2.3
PSPC1-204ENST00000492741 NUDCQ9Y266 331 aa29.45■■■□□ 2.3
PSPC1-204ENST00000492741 ZC3H6P61129 1189 aaKnown RBP29.44■■■□□ 2.3
PSPC1-204ENST00000492741 MED1Q15648 1581 aaPredicted RBP29.44■■■□□ 2.3
PSPC1-204ENST00000492741 PNPLA6Q8IY17 1366 aa29.44■■■□□ 2.3
PSPC1-204ENST00000492741 CDK12Q9NYV4 1490 aaPredicted RBP29.43■■■□□ 2.3
PSPC1-204ENST00000492741 NFAT5O94916 1531 aa29.43■■■□□ 2.3
PSPC1-204ENST00000492741 FLT4P35916 1363 aa29.42■■■□□ 2.3
PSPC1-204ENST00000492741 HSP90AB2PQ58FF8 381 aa29.41■■■□□ 2.3
PSPC1-204ENST00000492741 INSRP06213 1382 aa29.41■■■□□ 2.3
PSPC1-204ENST00000492741 U2SURPO15042 1029 aaKnown RBP29.4■■■□□ 2.3
PSPC1-204ENST00000492741 ARHGEF25Q86VW2 580 aa29.4■■■□□ 2.3
PSPC1-204ENST00000492741 ADAMTS8Q9UP79 889 aa29.4■■■□□ 2.3
PSPC1-204ENST00000492741 KIF24Q5T7B8 1368 aa29.39■■■□□ 2.3
PSPC1-204ENST00000492741 HOXC9P31274 260 aa29.39■■■□□ 2.3
PSPC1-204ENST00000492741 COL3A1P02461 1466 aaPredicted RBP29.37■■■□□ 2.29
PSPC1-204ENST00000492741 COL16A1Q07092 1604 aaPredicted RBP29.37■■■□□ 2.29
PSPC1-204ENST00000492741 PHRF1Q9P1Y6 1649 aaKnown RBP29.37■■■□□ 2.29
PSPC1-204ENST00000492741 U2AF1L5P0DN76 240 aaPredicted RBP29.37■■■□□ 2.29
PSPC1-204ENST00000492741 U2AF1Q01081 240 aaKnown RBP eCLIP29.37■■■□□ 2.293e-8■□□□□ 10.5
PSPC1-204ENST00000492741 IP6K1Q92551 441 aa29.37■■■□□ 2.29
PSPC1-204ENST00000492741 PEAK1Q9H792 1746 aa29.36■■■□□ 2.29
PSPC1-204ENST00000492741 RTL1A6NKG5 1358 aa29.35■■■□□ 2.29
PSPC1-204ENST00000492741 LTN1O94822 1766 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms